RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CCDC112Q8NEF3 446 aa21.02■□□□□ 0.96
NUP54-205ENST00000507257 MAP4K1Q92918 833 aa21.02■□□□□ 0.96
NUP54-205ENST00000507257 RBM6P78332 1123 aaKnown RBP21.02■□□□□ 0.95
NUP54-205ENST00000507257 BEND3Q5T5X7 828 aa21.02■□□□□ 0.95
NUP54-205ENST00000507257 CREB3L3Q68CJ9 461 aa21.02■□□□□ 0.95
NUP54-205ENST00000507257 ERC1Q8IUD2 1116 aa21.02■□□□□ 0.95
NUP54-205ENST00000507257 TRIM5Q9C035 493 aa21.02■□□□□ 0.95
NUP54-205ENST00000507257 KCND1Q9NSA2 647 aa21.02■□□□□ 0.95
NUP54-205ENST00000507257 FAM193AP78312 1265 aa21.01■□□□□ 0.95
NUP54-205ENST00000507257 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
NUP54-205ENST00000507257 LEO1Q8WVC0 666 aaPredicted RBP21.01■□□□□ 0.95
NUP54-205ENST00000507257 SPATA32Q96LK8 384 aa21.01■□□□□ 0.95
NUP54-205ENST00000507257 LRMPQ12912 555 aa21■□□□□ 0.95
NUP54-205ENST00000507257 MRFAP1L1Q96HT8 127 aa21■□□□□ 0.95
NUP54-205ENST00000507257 C16orf45Q96MC5 204 aaPredicted RBP21■□□□□ 0.95
NUP54-205ENST00000507257 RBM8AQ9Y5S9 174 aaKnown RBP21■□□□□ 0.95
NUP54-205ENST00000507257 KDM3BQ7LBC6 1761 aa21■□□□□ 0.95
NUP54-205ENST00000507257 JCADQ9P266 1359 aa21■□□□□ 0.95
NUP54-205ENST00000507257 GOLGA6L4A6NEF3 574 aa21■□□□□ 0.95
NUP54-205ENST00000507257 TPRNQ4KMQ1 711 aa21■□□□□ 0.95
NUP54-205ENST00000507257 DRC7Q8IY82 874 aa21■□□□□ 0.95
NUP54-205ENST00000507257 ADAMTS13Q76LX8 1427 aa20.99■□□□□ 0.95
NUP54-205ENST00000507257 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
NUP54-205ENST00000507257 ZNF165P49910 485 aa20.99■□□□□ 0.95
NUP54-205ENST00000507257 TSGA10IPQ3SY00 556 aa20.99■□□□□ 0.95
NUP54-205ENST00000507257 DNAAF4Q8WXU2 420 aa20.99■□□□□ 0.95
NUP54-205ENST00000507257 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
NUP54-205ENST00000507257 HDAC5Q9UQL6 1122 aa20.99■□□□□ 0.95
NUP54-205ENST00000507257 PIK3C2AO00443 1686 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 CAMK4Q16566 473 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 RNF20Q5VTR2 975 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 NECAB1Q8N987 351 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 NECTIN2Q92692 538 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 CLIP2Q9UDT6 1046 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 CEMIPQ8WUJ3 1361 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 SLFNL1Q499Z3 407 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 KIF18AQ8NI77 898 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 CACTINQ8WUQ7 758 aaKnown RBP20.98■□□□□ 0.95
NUP54-205ENST00000507257 FAM53CQ9NYF3 392 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
NUP54-205ENST00000507257 SLC27A2O14975 620 aa20.97■□□□□ 0.95
NUP54-205ENST00000507257 AMPHP49418 695 aa20.97■□□□□ 0.95
NUP54-205ENST00000507257 CKAP2LQ8IYA6 745 aa20.97■□□□□ 0.95
NUP54-205ENST00000507257 HMG20BQ9P0W2 317 aa20.97■□□□□ 0.95
NUP54-205ENST00000507257 NPHP4O75161 1426 aaPredicted RBP20.97■□□□□ 0.95
NUP54-205ENST00000507257 CTAGE5O15320 804 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 TPD52L1Q16890 204 aaPredicted RBP20.96■□□□□ 0.95
NUP54-205ENST00000507257 CEP135Q66GS9 1140 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 NYAP1Q6ZVC0 841 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 CREBRFQ8IUR6 639 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 ZNF397Q8NF99 534 aaPredicted RBP20.96■□□□□ 0.95
NUP54-205ENST00000507257 DIP2BQ9P265 1576 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 RPS6KB1P23443 525 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 IQCB1Q15051 598 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 BLOC1S2Q6QNY1 142 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 LRRC8AQ8IWT6 810 aa20.96■□□□□ 0.95
NUP54-205ENST00000507257 UBR1Q8IWV7 1749 aa20.95■□□□□ 0.94
NUP54-205ENST00000507257 KIF2AO00139 706 aaPredicted RBP20.94■□□□□ 0.94
NUP54-205ENST00000507257 OS9Q13438 667 aaPredicted RBP20.94■□□□□ 0.94
NUP54-205ENST00000507257 FERMT3Q86UX7 667 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 PGBD1Q96JS3 809 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 TMEM2Q9UHN6 1383 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 MED23Q9ULK4 1368 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 ALDH1L1O75891 902 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 IFIT2P09913 472 aaKnown RBP20.94■□□□□ 0.94
NUP54-205ENST00000507257 SLFN14P0C7P3 912 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
NUP54-205ENST00000507257 ZSCAN16Q9H4T2 348 aaPredicted RBP20.94■□□□□ 0.94
NUP54-205ENST00000507257 MYH15Q9Y2K3 1946 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 NR1I2O75469 434 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 CCDC144BQ3MJ40 725 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 LARP1Q6PKG0 1096 aaKnown RBP20.93■□□□□ 0.94
NUP54-205ENST00000507257 CCDC144CPQ8IYA2 1237 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 KRT222Q8N1A0 295 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 ERO1AQ96HE7 468 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 DNAJC25Q9H1X3 360 aa20.93■□□□□ 0.94
NUP54-205ENST00000507257 MARF1Q9Y4F3 1742 aaKnown RBP20.93■□□□□ 0.94
NUP54-205ENST00000507257 RESTQ13127 1097 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 TOB2Q14106 344 aaPredicted RBP20.92■□□□□ 0.94
NUP54-205ENST00000507257 ZNF771Q7L3S4 317 aaPredicted RBP20.92■□□□□ 0.94
NUP54-205ENST00000507257 CFAP45Q9UL16 551 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 SLIT1O75093 1534 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 ADCY9O60503 1353 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 GOLGA6L19H0YKK7 550 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 KCNJ4P48050 445 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
NUP54-205ENST00000507257 FAM173BQ6P4H8 233 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 CHMP3Q9Y3E7 222 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
NUP54-205ENST00000507257 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
NUP54-205ENST00000507257 NMIQ13287 307 aaPredicted RBP20.91■□□□□ 0.94
NUP54-205ENST00000507257 KRT32Q14532 448 aa20.91■□□□□ 0.94
NUP54-205ENST00000507257 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
NUP54-205ENST00000507257 BICD2Q8TD16 824 aa20.91■□□□□ 0.94
NUP54-205ENST00000507257 PLEKHG1Q9ULL1 1385 aa20.91■□□□□ 0.94
NUP54-205ENST00000507257 PTPN14Q15678 1187 aa20.9■□□□□ 0.94
NUP54-205ENST00000507257 STX1AQ16623 288 aa20.9■□□□□ 0.94
NUP54-205ENST00000507257 HOXC9P31274 260 aa20.9■□□□□ 0.94
NUP54-205ENST00000507257 TERF2Q15554 542 aa20.9■□□□□ 0.94
NUP54-205ENST00000507257 USPL1Q5W0Q7 1092 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms