RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 KSR2Q6VAB6 950 aa25.42■■□□□ 1.66
DDR1-259ENST00000507046 TTLL6Q8N841 843 aa25.42■■□□□ 1.66
DDR1-259ENST00000507046 ZNF622Q969S3 477 aaKnown RBP eCLIP25.42■■□□□ 1.66
DDR1-259ENST00000507046 TNRC6CQ9HCJ0 1690 aaKnown RBP25.42■■□□□ 1.66
DDR1-259ENST00000507046 ATP5J2-PTCD1G3V325 749 aa25.41■■□□□ 1.66
DDR1-259ENST00000507046 G2E3Q7L622 706 aa25.41■■□□□ 1.66
DDR1-259ENST00000507046 MASTLQ96GX5 879 aa25.41■■□□□ 1.66
DDR1-259ENST00000507046 MYD88Q99836 296 aa25.41■■□□□ 1.66
DDR1-259ENST00000507046 TRMT112Q9UI30 125 aaKnown RBP25.41■■□□□ 1.66
DDR1-259ENST00000507046 MAP3K2Q9Y2U5 619 aa25.41■■□□□ 1.66
DDR1-259ENST00000507046 PI4KAP2A4QPH2 592 aa25.4■■□□□ 1.66
DDR1-259ENST00000507046 SRGNP10124 158 aa25.4■■□□□ 1.66
DDR1-259ENST00000507046 FKBP5Q13451 457 aaPredicted RBP25.4■■□□□ 1.66
DDR1-259ENST00000507046 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
DDR1-259ENST00000507046 TRMT2AQ8IZ69 625 aaKnown RBP25.4■■□□□ 1.66
DDR1-259ENST00000507046 PI4KAP1Q8N8J0 262 aa25.4■■□□□ 1.66
DDR1-259ENST00000507046 METTL22Q9BUU2 404 aaPredicted RBP25.4■■□□□ 1.66
DDR1-259ENST00000507046 SH3TC1Q8TE82 1336 aa25.39■■□□□ 1.66
DDR1-259ENST00000507046 KLRG2A4D1S0 409 aaPredicted RBP25.39■■□□□ 1.66
DDR1-259ENST00000507046 NPR1P16066 1061 aa25.39■■□□□ 1.66
DDR1-259ENST00000507046 NEXNQ0ZGT2 675 aa25.39■■□□□ 1.66
DDR1-259ENST00000507046 TRIM28Q13263 835 aaKnown RBP25.39■■□□□ 1.66
DDR1-259ENST00000507046 CNKSR1Q969H4 720 aa25.39■■□□□ 1.66
DDR1-259ENST00000507046 ZNF428Q96B54 188 aa25.39■■□□□ 1.66
DDR1-259ENST00000507046 ADCY9O60503 1353 aa25.39■■□□□ 1.65
DDR1-259ENST00000507046 CHD4Q14839 1912 aa25.38■■□□□ 1.65
DDR1-259ENST00000507046 CT47B1P0C2W7 299 aaPredicted RBP25.37■■□□□ 1.65
DDR1-259ENST00000507046 CCDC191Q8NCU4 936 aa25.36■■□□□ 1.65
DDR1-259ENST00000507046 NLRP3Q96P20 1036 aa25.36■■□□□ 1.65
DDR1-259ENST00000507046 GOLGB1Q14789 3259 aaKnown RBP25.35■■□□□ 1.65
DDR1-259ENST00000507046 CRY2Q49AN0 593 aa25.35■■□□□ 1.65
DDR1-259ENST00000507046 SLC10A5Q5PT55 438 aa25.35■■□□□ 1.65
DDR1-259ENST00000507046 RPGRQ92834 1020 aaKnown RBP25.35■■□□□ 1.65
DDR1-259ENST00000507046 CWC25Q9NXE8 425 aaPredicted RBP25.35■■□□□ 1.65
DDR1-259ENST00000507046 ZBED9Q6R2W3 1325 aa25.35■■□□□ 1.65
DDR1-259ENST00000507046 YY1P25490 414 aa25.34■■□□□ 1.65
DDR1-259ENST00000507046 ARHGAP27Q6ZUM4 889 aa25.34■■□□□ 1.65
DDR1-259ENST00000507046 DNAAF4Q8WXU2 420 aa25.34■■□□□ 1.65
DDR1-259ENST00000507046 CACNA1SQ13698 1873 aa25.34■■□□□ 1.65
DDR1-259ENST00000507046 PRPF40BQ6NWY9 871 aaKnown RBP25.33■■□□□ 1.65
DDR1-259ENST00000507046 ALDH1B1P30837 517 aa25.32■■□□□ 1.64
DDR1-259ENST00000507046 ALDH1L2Q3SY69 923 aa25.32■■□□□ 1.64
DDR1-259ENST00000507046 FAM89AQ96GI7 184 aa25.32■■□□□ 1.64
DDR1-259ENST00000507046 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
DDR1-259ENST00000507046 HSP90B1P14625 803 aaKnown RBP25.31■■□□□ 1.64
DDR1-259ENST00000507046 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
DDR1-259ENST00000507046 ZBTB38Q8NAP3 1195 aaPredicted RBP25.31■■□□□ 1.64
DDR1-259ENST00000507046 RBM17Q96I25 401 aaKnown RBP25.31■■□□□ 1.64
DDR1-259ENST00000507046 LAMB2P55268 1798 aa25.31■■□□□ 1.64
DDR1-259ENST00000507046 DDX60Q8IY21 1712 aaKnown RBP25.3■■□□□ 1.64
DDR1-259ENST00000507046 IGKV5-2P06315 115 aa25.3■■□□□ 1.64
DDR1-259ENST00000507046 MRPL50Q8N5N7 158 aaKnown RBP25.3■■□□□ 1.64
DDR1-259ENST00000507046 SSH1Q8WYL5 1049 aa25.3■■□□□ 1.64
DDR1-259ENST00000507046 UTRNP46939 3433 aa25.3■■□□□ 1.64
DDR1-259ENST00000507046 NEURL1BA8MQ27 555 aa25.29■■□□□ 1.64
DDR1-259ENST00000507046 PCCAP05165 728 aaPredicted RBP25.29■■□□□ 1.64
DDR1-259ENST00000507046 RTL5Q5HYW3 569 aaPredicted RBP25.29■■□□□ 1.64
DDR1-259ENST00000507046 SOGA3Q5TF21 947 aa25.29■■□□□ 1.64
DDR1-259ENST00000507046 C3orf67Q6ZVT6 689 aa25.29■■□□□ 1.64
DDR1-259ENST00000507046 SMC4Q9NTJ3 1288 aa25.29■■□□□ 1.64
DDR1-259ENST00000507046 SLX4Q8IY92 1834 aa25.28■■□□□ 1.64
DDR1-259ENST00000507046 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
DDR1-259ENST00000507046 C21orf2O43822 256 aa25.28■■□□□ 1.64
DDR1-259ENST00000507046 HOXA10P31260 410 aaPredicted RBP25.28■■□□□ 1.64
DDR1-259ENST00000507046 CWF19L2Q2TBE0 894 aaKnown RBP25.28■■□□□ 1.64
DDR1-259ENST00000507046 ZNF219Q9P2Y4 722 aaPredicted RBP25.28■■□□□ 1.64
DDR1-259ENST00000507046 F6X3S4 739 aa25.27■■□□□ 1.64
DDR1-259ENST00000507046 LINS1Q8NG48 757 aa25.27■■□□□ 1.64
DDR1-259ENST00000507046 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
DDR1-259ENST00000507046 BCL2L13Q9BXK5 485 aa25.27■■□□□ 1.64
DDR1-259ENST00000507046 PTPRCP08575 1304 aa25.27■■□□□ 1.64
DDR1-259ENST00000507046 CDHR2Q9BYE9 1310 aa25.25■■□□□ 1.63
DDR1-259ENST00000507046 DDX46Q7L014 1031 aaKnown RBP25.24■■□□□ 1.63
DDR1-259ENST00000507046 GCKRQ14397 625 aa25.23■■□□□ 1.63
DDR1-259ENST00000507046 CCDC93Q567U6 631 aa25.23■■□□□ 1.63
DDR1-259ENST00000507046 ABCC4O15439 1325 aa25.22■■□□□ 1.63
DDR1-259ENST00000507046 PPEF1O14829 653 aaPredicted RBP25.22■■□□□ 1.63
DDR1-259ENST00000507046 PDE8AO60658 829 aa25.22■■□□□ 1.63
DDR1-259ENST00000507046 SF3B3Q15393 1217 aaKnown RBP25.22■■□□□ 1.63
DDR1-259ENST00000507046 BEND3Q5T5X7 828 aa25.22■■□□□ 1.63
DDR1-259ENST00000507046 SLC4A10Q6U841 1118 aa25.22■■□□□ 1.63
DDR1-259ENST00000507046 RASSF7Q02833 373 aa25.21■■□□□ 1.63
DDR1-259ENST00000507046 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
DDR1-259ENST00000507046 JARID2Q92833 1246 aaPredicted RBP25.21■■□□□ 1.63
DDR1-259ENST00000507046 FER1L6Q2WGJ9 1857 aa25.2■■□□□ 1.62
DDR1-259ENST00000507046 NFKBIEO00221 500 aa25.2■■□□□ 1.62
DDR1-259ENST00000507046 RARSP54136 660 aaKnown RBP25.2■■□□□ 1.62
DDR1-259ENST00000507046 UBE3BQ7Z3V4 1068 aa25.2■■□□□ 1.62
DDR1-259ENST00000507046 TMX4Q9H1E5 349 aaPredicted RBP25.2■■□□□ 1.62
DDR1-259ENST00000507046 TAOK3Q9H2K8 898 aa25.2■■□□□ 1.62
DDR1-259ENST00000507046 BRPF1P55201 1214 aaPredicted RBP25.19■■□□□ 1.62
DDR1-259ENST00000507046 GRAPQ13588 217 aa25.19■■□□□ 1.62
DDR1-259ENST00000507046 CC2D2BQ6DHV5 1058 aa25.19■■□□□ 1.62
DDR1-259ENST00000507046 GRAPLQ8TC17 118 aaPredicted RBP25.19■■□□□ 1.62
DDR1-259ENST00000507046 SRCIN1Q9C0H9 1055 aa25.19■■□□□ 1.62
DDR1-259ENST00000507046 KIF16BQ96L93 1317 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 LTBP3Q9NS15 1303 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 H7C1W4 665 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 ALDH1L1O75891 902 aa25.18■■□□□ 1.62
DDR1-259ENST00000507046 LMNB1P20700 586 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms