RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 TNS4Q8IZW8 715 aa17.77■□□□□ 0.44
DDX41-206ENST00000506965 IBTKQ9P2D0 1353 aaPredicted RBP17.77■□□□□ 0.43
DDX41-206ENST00000506965 TRPM7Q96QT4 1865 aa17.76■□□□□ 0.43
DDX41-206ENST00000506965 DDX60Q8IY21 1712 aaKnown RBP17.76■□□□□ 0.43
DDX41-206ENST00000506965 ANXA1P04083 346 aa17.76■□□□□ 0.43
DDX41-206ENST00000506965 FMR1Q06787 632 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX41-206ENST00000506965 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
DDX41-206ENST00000506965 THSD7BQ9C0I4 1608 aa17.74■□□□□ 0.43
DDX41-206ENST00000506965 FOXN1O15353 648 aa17.74■□□□□ 0.43
DDX41-206ENST00000506965 EPHX2P34913 555 aa17.74■□□□□ 0.43
DDX41-206ENST00000506965 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
DDX41-206ENST00000506965 PSMD1Q99460 953 aa17.74■□□□□ 0.43
DDX41-206ENST00000506965 IQCA1LA6NCM1 817 aa17.73■□□□□ 0.43
DDX41-206ENST00000506965 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
DDX41-206ENST00000506965 EAPPQ56P03 285 aaPredicted RBP17.73■□□□□ 0.43
DDX41-206ENST00000506965 MAP1SQ66K74 1059 aaPredicted RBP17.73■□□□□ 0.43
DDX41-206ENST00000506965 HACL1Q9UJ83 578 aa17.73■□□□□ 0.43
DDX41-206ENST00000506965 DUOX1Q9NRD9 1551 aa17.73■□□□□ 0.43
DDX41-206ENST00000506965 VEGFBP49765 207 aa17.72■□□□□ 0.43
DDX41-206ENST00000506965 SCNN1DP51172 638 aa17.72■□□□□ 0.43
DDX41-206ENST00000506965 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
DDX41-206ENST00000506965 GIGYF2Q6Y7W6 1299 aaKnown RBP17.72■□□□□ 0.43
DDX41-206ENST00000506965 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
DDX41-206ENST00000506965 LRRC37AA6NMS7 1700 aa17.72■□□□□ 0.43
DDX41-206ENST00000506965 NYXQ9GZU5 481 aa17.71■□□□□ 0.43
DDX41-206ENST00000506965 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
DDX41-206ENST00000506965 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
DDX41-206ENST00000506965 KIF6Q6ZMV9 814 aa17.7■□□□□ 0.42
DDX41-206ENST00000506965 GPC2Q8N158 579 aa17.7■□□□□ 0.42
DDX41-206ENST00000506965 EPS15P42566 896 aa17.69■□□□□ 0.42
DDX41-206ENST00000506965 CNTROBQ8N137 903 aa17.69■□□□□ 0.42
DDX41-206ENST00000506965 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
DDX41-206ENST00000506965 ERBB4Q15303 1308 aa17.69■□□□□ 0.42
DDX41-206ENST00000506965 TMEM88BA6NKF7 163 aa17.68■□□□□ 0.42
DDX41-206ENST00000506965 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
DDX41-206ENST00000506965 ZNF428Q96B54 188 aa17.68■□□□□ 0.42
DDX41-206ENST00000506965 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
DDX41-206ENST00000506965 ABCC4O15439 1325 aa17.68■□□□□ 0.42
DDX41-206ENST00000506965 EIF2S2P20042 333 aaKnown RBP17.67■□□□□ 0.42
DDX41-206ENST00000506965 TMPOP42166 694 aaKnown RBP17.67■□□□□ 0.42
DDX41-206ENST00000506965 SLC10A5Q5PT55 438 aa17.67■□□□□ 0.42
DDX41-206ENST00000506965 NECTIN2Q92692 538 aa17.67■□□□□ 0.42
DDX41-206ENST00000506965 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
DDX41-206ENST00000506965 CLEC11AQ9Y240 323 aa17.67■□□□□ 0.42
DDX41-206ENST00000506965 GJA3Q9Y6H8 435 aa17.67■□□□□ 0.42
DDX41-206ENST00000506965 RASSF10A6NK89 507 aa17.66■□□□□ 0.42
DDX41-206ENST00000506965 RIPK4P57078 832 aa17.66■□□□□ 0.42
DDX41-206ENST00000506965 POLR2AP24928 1970 aaKnown RBP17.66■□□□□ 0.42
DDX41-206ENST00000506965 TRAF5O00463 557 aa17.65■□□□□ 0.42
DDX41-206ENST00000506965 AOC3Q16853 763 aa17.65■□□□□ 0.42
DDX41-206ENST00000506965 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
DDX41-206ENST00000506965 WBP1LQ9NX94 342 aa17.65■□□□□ 0.42
DDX41-206ENST00000506965 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
DDX41-206ENST00000506965 SCN9AQ15858 1988 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
DDX41-206ENST00000506965 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.41
DDX41-206ENST00000506965 NLRP10Q86W26 655 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 LARGE2Q8N3Y3 721 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 RBM17Q96I25 401 aaKnown RBP17.64■□□□□ 0.41
DDX41-206ENST00000506965 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDX41-206ENST00000506965 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
DDX41-206ENST00000506965 SHTN1A0MZ66 631 aa17.63■□□□□ 0.41
DDX41-206ENST00000506965 CST9Q5W186 159 aa17.63■□□□□ 0.41
DDX41-206ENST00000506965 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
DDX41-206ENST00000506965 JDP2Q8WYK2 163 aa17.63■□□□□ 0.41
DDX41-206ENST00000506965 NEFMP07197 916 aa17.62■□□□□ 0.41
DDX41-206ENST00000506965 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
DDX41-206ENST00000506965 CXCL9Q07325 125 aa17.62■□□□□ 0.41
DDX41-206ENST00000506965 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
DDX41-206ENST00000506965 UTP14AQ9BVJ6 771 aaKnown RBP17.62■□□□□ 0.41
DDX41-206ENST00000506965 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
DDX41-206ENST00000506965 CHL1O00533 1208 aa17.61■□□□□ 0.41
DDX41-206ENST00000506965 PPIP5K2O43314 1243 aa17.61■□□□□ 0.41
DDX41-206ENST00000506965 AIMP1Q12904 312 aaKnown RBP17.61■□□□□ 0.41
DDX41-206ENST00000506965 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
DDX41-206ENST00000506965 YDJCA8MPS7 323 aa17.6■□□□□ 0.41
DDX41-206ENST00000506965 HSPA8P11142 646 aaKnown RBP17.6■□□□□ 0.41
DDX41-206ENST00000506965 LBX1P52954 281 aa17.6■□□□□ 0.41
DDX41-206ENST00000506965 DEFB115Q30KQ5 88 aa17.6■□□□□ 0.41
DDX41-206ENST00000506965 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
DDX41-206ENST00000506965 PRDM10Q9NQV6 1147 aa17.6■□□□□ 0.41
DDX41-206ENST00000506965 GPRC5DQ9NZD1 345 aa17.6■□□□□ 0.41
DDX41-206ENST00000506965 WDR33Q9C0J8 1336 aaKnown RBP17.6■□□□□ 0.41
DDX41-206ENST00000506965 HIRAP54198 1017 aaPredicted RBP17.59■□□□□ 0.41
DDX41-206ENST00000506965 TCIRG1Q13488 830 aa17.59■□□□□ 0.41
DDX41-206ENST00000506965 NIM1KQ8IY84 436 aa17.59■□□□□ 0.41
DDX41-206ENST00000506965 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
DDX41-206ENST00000506965 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
DDX41-206ENST00000506965 NEUROD2Q15784 382 aa17.58■□□□□ 0.4
DDX41-206ENST00000506965 DLK2Q6UY11 383 aa17.58■□□□□ 0.4
DDX41-206ENST00000506965 ZNF646O15015 1829 aaPredicted RBP17.57■□□□□ 0.4
DDX41-206ENST00000506965 CTCFP49711 727 aaPredicted RBP17.57■□□□□ 0.4
DDX41-206ENST00000506965 GMPSP49915 693 aaPredicted RBP17.57■□□□□ 0.4
DDX41-206ENST00000506965 CYP4F22Q6NT55 531 aa17.57■□□□□ 0.4
DDX41-206ENST00000506965 USP50Q70EL3 339 aaPredicted RBP17.57■□□□□ 0.4
DDX41-206ENST00000506965 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
DDX41-206ENST00000506965 TRPM4Q8TD43 1214 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms