RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 B8ZZF3 427 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 DLL1O00548 723 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 DEAF1O75398 565 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 TXLNAP40222 546 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 NR1H3Q13133 447 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 LILRA6Q6PI73 481 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 BHMTQ93088 406 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
TOPBP1-205ENST00000506779 F8W735 103 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 CDK2AP1O14519 115 aa6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 BUD31P41223 144 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 GDF10P55107 478 aa6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 USP4Q13107 963 aa6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 PARP3Q9Y6F1 533 aa6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 USP3Q9Y6I4 520 aa6.25□□□□□ -1.41
TOPBP1-205ENST00000506779 Q6ZS46 218 aa6.24□□□□□ -1.41
TOPBP1-205ENST00000506779 NEUROD4Q9HD90 331 aa6.24□□□□□ -1.41
TOPBP1-205ENST00000506779 GRIK5Q16478 980 aa6.23□□□□□ -1.41
TOPBP1-205ENST00000506779 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
TOPBP1-205ENST00000506779 WFDC8Q8IUA0 241 aa6.23□□□□□ -1.41
TOPBP1-205ENST00000506779 GJD4Q96KN9 370 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-205ENST00000506779 MRPL18Q9H0U6 180 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-205ENST00000506779 APBB1O00213 710 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 DHX15O43143 795 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 KCNQ4P56696 695 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 MTFR1Q15390 333 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 TSGA10IPQ3SY00 556 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 RNF43Q68DV7 783 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 DNAJB12Q9NXW2 375 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 KCNH4Q9UQ05 1017 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 NDUFB9Q9Y6M9 179 aa6.22□□□□□ -1.41
TOPBP1-205ENST00000506779 GLB1P16278 677 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 C7orf43Q8WVR3 580 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 UBL7Q96S82 380 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 DBNDD2Q9BQY9 259 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 CEP126Q9P2H0 1117 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 SERTAD1Q9UHV2 236 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 JAG2Q9Y219 1238 aa6.21□□□□□ -1.42
TOPBP1-205ENST00000506779 A6NJY4 79 aa6.2□□□□□ -1.42
TOPBP1-205ENST00000506779 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
TOPBP1-205ENST00000506779 SLC4A9Q96Q91 983 aa6.2□□□□□ -1.42
TOPBP1-205ENST00000506779 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
TOPBP1-205ENST00000506779 ANGEL1Q9UNK9 670 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-205ENST00000506779 EML1O00423 815 aa6.19□□□□□ -1.42
TOPBP1-205ENST00000506779 BRPF1P55201 1214 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-205ENST00000506779 PKN1Q16512 942 aa6.19□□□□□ -1.42
TOPBP1-205ENST00000506779 BANK1Q8NDB2 785 aa6.19□□□□□ -1.42
TOPBP1-205ENST00000506779 CEP63Q96MT8 703 aa6.19□□□□□ -1.42
TOPBP1-205ENST00000506779 GPC6Q9Y625 555 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-205ENST00000506779 HMX2A2RU54 273 aa6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 HOXA10P31260 410 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 COL19A1Q14993 1142 aa6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 ARMC10Q8N2F6 343 aa6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 AGGF1Q8N302 714 aaeCLIP6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 MTMR14Q8NCE2 650 aa6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 ZDHHC1Q8WTX9 485 aa6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 DOLKQ9UPQ8 538 aa6.18□□□□□ -1.42
TOPBP1-205ENST00000506779 PLAURQ03405 335 aa6.17□□□□□ -1.42
TOPBP1-205ENST00000506779 SHKBP1Q8TBC3 707 aa6.17□□□□□ -1.42
TOPBP1-205ENST00000506779 FAM35AQ86V20 835 aa6.16□□□□□ -1.42
TOPBP1-205ENST00000506779 L3MBTL2Q969R5 705 aa6.16□□□□□ -1.42
TOPBP1-205ENST00000506779 LPIN3Q9BQK8 851 aa6.16□□□□□ -1.42
TOPBP1-205ENST00000506779 FARP2O94887 1054 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 CPB1P15086 417 aa6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 NFXL1Q6ZNB6 911 aa6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 SIRT1Q96EB6 747 aa6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 SNRKQ9NRH2 765 aa6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 FRRS1LQ9P0K9 344 aa6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 CCDC39Q9UFE4 941 aa6.15□□□□□ -1.42
TOPBP1-205ENST00000506779 OXLD1Q5BKU9 147 aa6.14□□□□□ -1.43
TOPBP1-205ENST00000506779 TP53INP2Q8IXH6 220 aa6.14□□□□□ -1.43
TOPBP1-205ENST00000506779 FBXL18Q96ME1 805 aa6.14□□□□□ -1.43
TOPBP1-205ENST00000506779 PRM3Q9NNZ6 103 aa6.14□□□□□ -1.43
TOPBP1-205ENST00000506779 SFI1A8K8P3 1242 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 TMEM229AB2RXF0 380 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 GPR37L1O60883 481 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 PAPLNO95428 1278 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 TYRO3Q06418 890 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 TPRNQ4KMQ1 711 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 PERM1Q5SV97 790 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 EFCC1Q9HA90 598 aa6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-205ENST00000506779 PRKCSHP14314 528 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-205ENST00000506779 NOS2P35228 1153 aa6.12□□□□□ -1.43
TOPBP1-205ENST00000506779 TEAD4Q15561 434 aa6.12□□□□□ -1.43
TOPBP1-205ENST00000506779 PHTF2Q8N3S3 785 aa6.12□□□□□ -1.43
TOPBP1-205ENST00000506779 TTC9Q92623 222 aa6.12□□□□□ -1.43
TOPBP1-205ENST00000506779 PRNPP04156 253 aa6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 EIF4G2P78344 907 aaKnown RBP eCLIP6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 KSR1Q8IVT5 923 aa6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 RHPN1Q8TCX5 695 aa6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 UTP4Q969X6 686 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 HSH2DQ96JZ2 352 aa6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 PIM2Q9P1W9 311 aa6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 TBC1D2BQ9UPU7 963 aa6.11□□□□□ -1.43
TOPBP1-205ENST00000506779 WDR64B1ANS9 1081 aa6.1□□□□□ -1.43
TOPBP1-205ENST00000506779 MSMPQ1L6U9 139 aa6.1□□□□□ -1.43
TOPBP1-205ENST00000506779 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms