RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 TSEN2Q8NCE0 465 aaKnown RBP6.99□□□□□ -1.29
SMAD1-205ENST00000506626 TNFRSF25Q93038 417 aa6.99□□□□□ -1.29
SMAD1-205ENST00000506626 HCN4Q9Y3Q4 1203 aa6.99□□□□□ -1.29
SMAD1-205ENST00000506626 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 PPP1R12BO60237 982 aaPredicted RBP6.98□□□□□ -1.29
SMAD1-205ENST00000506626 DKK1O94907 266 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 ALBP02768 609 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 TYRO3Q06418 890 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 SPEM2Q0P670 501 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
SMAD1-205ENST00000506626 C8orf86Q6ZUL3 223 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 BRD7Q9NPI1 651 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 ANKIB1Q9P2G1 1089 aa6.98□□□□□ -1.29
SMAD1-205ENST00000506626 MICALL1Q8N3F8 863 aa6.97□□□□□ -1.29
SMAD1-205ENST00000506626 ZNF280CQ8ND82 737 aa6.97□□□□□ -1.29
SMAD1-205ENST00000506626 GLMNQ92990 594 aa6.97□□□□□ -1.29
SMAD1-205ENST00000506626 CEP63Q96MT8 703 aa6.97□□□□□ -1.29
SMAD1-205ENST00000506626 RBM19Q9Y4C8 960 aaKnown RBP6.97□□□□□ -1.29
SMAD1-205ENST00000506626 C21orf2O43822 256 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 SELPP16109 830 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 KCNQ4P56696 695 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 NEUROD1Q13562 356 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 RAB44Q7Z6P3 723 aaPredicted RBP6.96□□□□□ -1.3
SMAD1-205ENST00000506626 PROSER2Q86WR7 435 aaPredicted RBP6.96□□□□□ -1.3
SMAD1-205ENST00000506626 CLUAP1Q96AJ1 413 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 SUSD3Q96L08 255 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 KCNH4Q9UQ05 1017 aa6.96□□□□□ -1.3
SMAD1-205ENST00000506626 MAFBQ9Y5Q3 323 aaPredicted RBP6.96□□□□□ -1.3
SMAD1-205ENST00000506626 C9orf172C9J069 976 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 RASA1P20936 1047 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 ADH7P40394 386 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 TXNRD3Q86VQ6 643 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 ALDH16A1Q8IZ83 802 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 STAG2Q8N3U4 1231 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 FNBP4Q8N3X1 1017 aaPredicted RBP6.95□□□□□ -1.3
SMAD1-205ENST00000506626 C2orf49Q9BVC5 232 aaPredicted RBP6.95□□□□□ -1.3
SMAD1-205ENST00000506626 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
SMAD1-205ENST00000506626 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
SMAD1-205ENST00000506626 SEC13P55735 322 aa6.94□□□□□ -1.3
SMAD1-205ENST00000506626 C20orf204Q6ZNR8 217 aa6.94□□□□□ -1.3
SMAD1-205ENST00000506626 TFIP11Q9UBB9 837 aaKnown RBP6.94□□□□□ -1.3
SMAD1-205ENST00000506626 HIF1AQ16665 826 aa6.93□□□□□ -1.3
SMAD1-205ENST00000506626 GAS2L2Q8NHY3 880 aa6.93□□□□□ -1.3
SMAD1-205ENST00000506626 SCG3Q8WXD2 468 aaKnown RBP6.93□□□□□ -1.3
SMAD1-205ENST00000506626 FMNL2Q96PY5 1086 aa6.93□□□□□ -1.3
SMAD1-205ENST00000506626 COL17A1Q9UMD9 1497 aaPredicted RBP6.92□□□□□ -1.3
SMAD1-205ENST00000506626 ELNP15502 786 aa6.92□□□□□ -1.3
SMAD1-205ENST00000506626 BTLAQ7Z6A9 289 aa6.92□□□□□ -1.3
SMAD1-205ENST00000506626 CHMP7Q8WUX9 453 aaPredicted RBP6.92□□□□□ -1.3
SMAD1-205ENST00000506626 BHMTQ93088 406 aa6.92□□□□□ -1.3
SMAD1-205ENST00000506626 LENG1Q96BZ8 264 aaPredicted RBP6.92□□□□□ -1.3
SMAD1-205ENST00000506626 NGLY1Q96IV0 654 aa6.92□□□□□ -1.3
SMAD1-205ENST00000506626 RNF112Q9ULX5 631 aa6.92□□□□□ -1.3
SMAD1-205ENST00000506626 A0A0A0MRY4 1105 aa6.9□□□□□ -1.3
SMAD1-205ENST00000506626 RTN1Q16799 776 aa6.9□□□□□ -1.3
SMAD1-205ENST00000506626 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.3
SMAD1-205ENST00000506626 IER5Q5VY09 327 aa6.9□□□□□ -1.3
SMAD1-205ENST00000506626 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
SMAD1-205ENST00000506626 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.3
SMAD1-205ENST00000506626 TP53INP1Q96A56 240 aa6.9□□□□□ -1.3
SMAD1-205ENST00000506626 PPP1R12CQ9BZL4 782 aa6.9□□□□□ -1.3
SMAD1-205ENST00000506626 TGFBR3LH3BV60 316 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 PAX4O43316 350 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
SMAD1-205ENST00000506626 TBC1D8BQ0IIM8 1120 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 DPYDQ12882 1025 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 PTK7Q13308 1070 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 UBE2OQ9C0C9 1292 aaKnown RBP6.89□□□□□ -1.31
SMAD1-205ENST00000506626 SLC6A14Q9UN76 642 aa6.89□□□□□ -1.31
SMAD1-205ENST00000506626 FAM196BA6NMK8 535 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L15C9J2P7 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L10C9JJH3 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L13C9JLJ4 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L12C9JPN9 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L11C9JVI0 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L21D6R901 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L18D6R9N7 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L22D6RA61 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L17D6RBQ6 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L19D6RCP7 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L20D6RJB6 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 COBLO75128 1261 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 IGFBP4P22692 258 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 USP17L24Q0WX57 530 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 TMEM132AQ24JP5 1023 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 KANK4Q5T7N3 995 aaPredicted RBP6.88□□□□□ -1.31
SMAD1-205ENST00000506626 CALR3Q96L12 384 aaKnown RBP6.88□□□□□ -1.31
SMAD1-205ENST00000506626 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
SMAD1-205ENST00000506626 A6NJR5 290 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 LILRB5O75023 590 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 LGR5O75473 907 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 YBX3P16989 372 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMAD1-205ENST00000506626 TXKP42681 527 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 ILDR2Q71H61 639 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 GSX2Q9BZM3 304 aa6.87□□□□□ -1.31
SMAD1-205ENST00000506626 DMGDHQ9UI17 866 aaKnown RBP6.87□□□□□ -1.31
SMAD1-205ENST00000506626 BCS1LQ9Y276 419 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms