RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 GPR182O15218 404 aa10.03□□□□□ -0.8
HERC4-213ENST00000506515 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
HERC4-213ENST00000506515 GIPC2Q8TF65 315 aa10.03□□□□□ -0.8
HERC4-213ENST00000506515 ZCCHC2Q9C0B9 1178 aaKnown RBP10.03□□□□□ -0.8
HERC4-213ENST00000506515 GGNBP2Q9H3C7 697 aa10.03□□□□□ -0.8
HERC4-213ENST00000506515 TREHO43280 583 aa10.02□□□□□ -0.81
HERC4-213ENST00000506515 PLCB3Q01970 1234 aa10.02□□□□□ -0.81
HERC4-213ENST00000506515 NIF3L1Q9GZT8 377 aa10.02□□□□□ -0.81
HERC4-213ENST00000506515 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
HERC4-213ENST00000506515 BRD7Q9NPI1 651 aa10.02□□□□□ -0.81
HERC4-213ENST00000506515 RBM47A0AV96 593 aaKnown RBP10.01□□□□□ -0.81
HERC4-213ENST00000506515 IGHA2P01877 340 aa10.01□□□□□ -0.81
HERC4-213ENST00000506515 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
HERC4-213ENST00000506515 THBS1P07996 1170 aa10.01□□□□□ -0.81
HERC4-213ENST00000506515 EPB42P16452 691 aa10.01□□□□□ -0.81
HERC4-213ENST00000506515 MAPK8P45983 427 aa10.01□□□□□ -0.81
HERC4-213ENST00000506515 CUEDC1Q9NWM3 386 aaPredicted RBP10.01□□□□□ -0.81
HERC4-213ENST00000506515 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
HERC4-213ENST00000506515 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
HERC4-213ENST00000506515 H7C1W4 665 aa10□□□□□ -0.81
HERC4-213ENST00000506515 ATXN7O15265 892 aaPredicted RBP10□□□□□ -0.81
HERC4-213ENST00000506515 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
HERC4-213ENST00000506515 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
HERC4-213ENST00000506515 EHHADHQ08426 723 aa10□□□□□ -0.81
HERC4-213ENST00000506515 LBRQ14739 615 aaKnown RBP10□□□□□ -0.81
HERC4-213ENST00000506515 DBN1Q16643 649 aa10□□□□□ -0.81
HERC4-213ENST00000506515 EAPPQ56P03 285 aaPredicted RBP10□□□□□ -0.81
HERC4-213ENST00000506515 SAMD5Q5TGI4 173 aa10□□□□□ -0.81
HERC4-213ENST00000506515 FIGNL1Q6PIW4 674 aa10□□□□□ -0.81
HERC4-213ENST00000506515 DCDC2BA2VCK2 349 aa9.99□□□□□ -0.81
HERC4-213ENST00000506515 KHNYNO15037 678 aaKnown RBP9.99□□□□□ -0.81
HERC4-213ENST00000506515 ZNF16P17020 682 aaPredicted RBP9.99□□□□□ -0.81
HERC4-213ENST00000506515 GRNP28799 593 aaKnown RBP9.99□□□□□ -0.81
HERC4-213ENST00000506515 DSC3Q14574 896 aa9.99□□□□□ -0.81
HERC4-213ENST00000506515 TRIP4Q15650 581 aaPredicted RBP9.99□□□□□ -0.81
HERC4-213ENST00000506515 FNDC3AQ9Y2H6 1198 aaKnown RBP9.99□□□□□ -0.81
HERC4-213ENST00000506515 KCNMB2Q9Y691 235 aa9.99□□□□□ -0.81
HERC4-213ENST00000506515 LCE2BO14633 110 aa9.98□□□□□ -0.81
HERC4-213ENST00000506515 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
HERC4-213ENST00000506515 COL19A1Q14993 1142 aa9.98□□□□□ -0.81
HERC4-213ENST00000506515 ZNF326Q5BKZ1 582 aaKnown RBP9.98□□□□□ -0.81
HERC4-213ENST00000506515 FBXO33Q7Z6M2 555 aa9.98□□□□□ -0.81
HERC4-213ENST00000506515 TRIM22Q8IYM9 498 aa9.98□□□□□ -0.81
HERC4-213ENST00000506515 PCDHGC4Q9Y5F7 938 aa9.98□□□□□ -0.81
HERC4-213ENST00000506515 ITGA6P23229 1130 aa9.97□□□□□ -0.81
HERC4-213ENST00000506515 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
HERC4-213ENST00000506515 ZNF438Q7Z4V0 828 aa9.97□□□□□ -0.81
HERC4-213ENST00000506515 ALKBH8Q96BT7 664 aaKnown RBP9.97□□□□□ -0.81
HERC4-213ENST00000506515 UNCXA6NJT0 531 aa9.96□□□□□ -0.82
HERC4-213ENST00000506515 XYLBO75191 536 aa9.96□□□□□ -0.82
HERC4-213ENST00000506515 FAM157BP0CG42 384 aa9.96□□□□□ -0.82
HERC4-213ENST00000506515 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.82
HERC4-213ENST00000506515 UBAP2LQ14157 1087 aaKnown RBP9.96□□□□□ -0.82
HERC4-213ENST00000506515 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.82
HERC4-213ENST00000506515 ORC1Q13415 861 aa9.95□□□□□ -0.82
HERC4-213ENST00000506515 GTPBP3Q969Y2 492 aaKnown RBP9.95□□□□□ -0.82
HERC4-213ENST00000506515 ZNF837Q96EG3 531 aaPredicted RBP9.95□□□□□ -0.82
HERC4-213ENST00000506515 PNMA6FA0A0J9YX94 578 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 CDC14CA4D256 554 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 POTECB2RU33 542 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 BNIP3LO60238 219 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
HERC4-213ENST00000506515 MAPTP10636 758 aaKnown RBP9.94□□□□□ -0.82
HERC4-213ENST00000506515 TNP2Q05952 138 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 STRN4Q9NRL3 753 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 FOXD3Q9UJU5 478 aaPredicted RBP9.94□□□□□ -0.82
HERC4-213ENST00000506515 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
HERC4-213ENST00000506515 E9PSI1 815 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 EFSO43281 561 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 PPFIA3O75145 1194 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 PDE12Q6L8Q7 609 aaKnown RBP9.93□□□□□ -0.82
HERC4-213ENST00000506515 KRT25Q7Z3Z0 450 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 ELP3Q9H9T3 547 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
HERC4-213ENST00000506515 TNFRSF21O75509 655 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 SASH3O75995 380 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 NEFLP07196 543 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 KCNQ4P56696 695 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 ATP2B2Q01814 1243 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 GRIN2CQ14957 1233 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 XKR5Q6UX68 686 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 MRRFQ96E11 262 aaKnown RBP9.92□□□□□ -0.82
HERC4-213ENST00000506515 GMCL1Q96IK5 515 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 CSRNP1Q96S65 589 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
HERC4-213ENST00000506515 GPR25O00155 361 aa9.91□□□□□ -0.82
HERC4-213ENST00000506515 EIF1AYO14602 144 aaKnown RBP9.91□□□□□ -0.82
HERC4-213ENST00000506515 CD33P20138 364 aa9.91□□□□□ -0.82
HERC4-213ENST00000506515 ENOX2Q16206 610 aaKnown RBP9.91□□□□□ -0.82
HERC4-213ENST00000506515 NLRP13Q86W25 1043 aa9.91□□□□□ -0.82
HERC4-213ENST00000506515 VWA5B2Q8N398 1253 aa9.91□□□□□ -0.82
HERC4-213ENST00000506515 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
HERC4-213ENST00000506515 HCN2Q9UL51 889 aa9.91□□□□□ -0.82
HERC4-213ENST00000506515 EGFRP00533 1210 aa9.9□□□□□ -0.82
HERC4-213ENST00000506515 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
HERC4-213ENST00000506515 CCINQ13939 588 aa9.9□□□□□ -0.82
HERC4-213ENST00000506515 SNX29Q8TEQ0 813 aa9.9□□□□□ -0.82
HERC4-213ENST00000506515 GSX2Q9BZM3 304 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms