RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CLSTN2Q9H4D0 955 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 CLIP2Q9UDT6 1046 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 TULP2O00295 520 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 ANO6Q4KMQ2 910 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 LUZP1Q86V48 1076 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 STK31Q9BXU1 1019 aa18.78■□□□□ 0.6
SCLT1-208ENST00000506368 ACEP12821 1306 aa18.77■□□□□ 0.6
SCLT1-208ENST00000506368 GOLGA6L4A6NEF3 574 aa18.77■□□□□ 0.6
SCLT1-208ENST00000506368 IGSF3O75054 1194 aa18.77■□□□□ 0.6
SCLT1-208ENST00000506368 SLU7O95391 586 aaKnown RBP18.77■□□□□ 0.59
SCLT1-208ENST00000506368 KCNJ4P48050 445 aa18.77■□□□□ 0.59
SCLT1-208ENST00000506368 IRX5P78411 483 aaPredicted RBP18.77■□□□□ 0.59
SCLT1-208ENST00000506368 KMT5BQ4FZB7 885 aa18.77■□□□□ 0.59
SCLT1-208ENST00000506368 SLC4A10Q6U841 1118 aa18.77■□□□□ 0.59
SCLT1-208ENST00000506368 TTC6Q86TZ1 520 aa18.77■□□□□ 0.59
SCLT1-208ENST00000506368 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.59
SCLT1-208ENST00000506368 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.59
SCLT1-208ENST00000506368 MAP3K5Q99683 1374 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 LRMPQ12912 555 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 TSHZ3Q63HK5 1081 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 UNC5CLQ8IV45 518 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 LRRC8AQ8IWT6 810 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 NGDNQ8NEJ9 315 aaKnown RBP18.76■□□□□ 0.59
SCLT1-208ENST00000506368 PDRG1Q9NUG6 133 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
SCLT1-208ENST00000506368 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
SCLT1-208ENST00000506368 ZNF165P49910 485 aa18.75■□□□□ 0.59
SCLT1-208ENST00000506368 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
SCLT1-208ENST00000506368 CACTINQ8WUQ7 758 aaKnown RBP18.75■□□□□ 0.59
SCLT1-208ENST00000506368 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
SCLT1-208ENST00000506368 RGPD1P0DJD0 1748 aa18.75■□□□□ 0.59
SCLT1-208ENST00000506368 CTAGE5O15320 804 aa18.75■□□□□ 0.59
SCLT1-208ENST00000506368 CCDC83Q8IWF9 413 aa18.75■□□□□ 0.59
SCLT1-208ENST00000506368 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
SCLT1-208ENST00000506368 FAM208AQ9UK61 1670 aaKnown RBP18.75■□□□□ 0.59
SCLT1-208ENST00000506368 AKAP12Q02952 1782 aa18.75■□□□□ 0.59
SCLT1-208ENST00000506368 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
SCLT1-208ENST00000506368 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
SCLT1-208ENST00000506368 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
SCLT1-208ENST00000506368 ANKRD1Q15327 319 aa18.74■□□□□ 0.59
SCLT1-208ENST00000506368 HSP90AB4PQ58FF6 505 aa18.74■□□□□ 0.59
SCLT1-208ENST00000506368 PI4K2BQ8TCG2 481 aa18.74■□□□□ 0.59
SCLT1-208ENST00000506368 KIF1AQ12756 1690 aa18.74■□□□□ 0.59
SCLT1-208ENST00000506368 PNMA6EA0A0J9YXQ4 647 aa18.73■□□□□ 0.59
SCLT1-208ENST00000506368 VPS37CA5D8V6 355 aaPredicted RBP18.73■□□□□ 0.59
SCLT1-208ENST00000506368 GOLGA6L19H0YKK7 550 aa18.73■□□□□ 0.59
SCLT1-208ENST00000506368 GSDMDP57764 484 aa18.73■□□□□ 0.59
SCLT1-208ENST00000506368 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
SCLT1-208ENST00000506368 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
SCLT1-208ENST00000506368 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
SCLT1-208ENST00000506368 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
SCLT1-208ENST00000506368 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
SCLT1-208ENST00000506368 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
SCLT1-208ENST00000506368 CYP2C19P33261 490 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 KCNJ6P48051 423 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 CCDC30Q5VVM6 783 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 ZKSCAN1P17029 563 aaPredicted RBP18.72■□□□□ 0.59
SCLT1-208ENST00000506368 LIG1P18858 919 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 FBLN1P23142 703 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 PSMA5P28066 241 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 SPATA32Q96LK8 384 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 NOL10Q9BSC4 688 aaKnown RBP18.72■□□□□ 0.59
SCLT1-208ENST00000506368 IL25Q9H293 177 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 NRBP1Q9UHY1 535 aa18.72■□□□□ 0.59
SCLT1-208ENST00000506368 ATP8B1O43520 1251 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 PSME1Q06323 249 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 TEX35Q5T0J7 233 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 FBXO38Q6PIJ6 1188 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 NME9Q86XW9 330 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 L2HGDHQ9H9P8 463 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 PHLPP1O60346 1717 aa18.71■□□□□ 0.59
SCLT1-208ENST00000506368 F6X3S4 739 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 H2AFXP16104 143 aaPredicted RBP18.7■□□□□ 0.58
SCLT1-208ENST00000506368 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 GLRX3O76003 335 aaKnown RBP18.7■□□□□ 0.58
SCLT1-208ENST00000506368 FLIIQ13045 1269 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 POLA2Q14181 598 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 G2E3Q7L622 706 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 TSPYL4Q9UJ04 414 aa18.7■□□□□ 0.58
SCLT1-208ENST00000506368 SKILP12757 684 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 ZNF592Q92610 1267 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 ARGLU1Q9NWB6 273 aaPredicted RBP18.69■□□□□ 0.58
SCLT1-208ENST00000506368 PXDNQ92626 1479 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 LARGE1O95461 756 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 UBTFL1P0CB47 393 aaPredicted RBP18.69■□□□□ 0.58
SCLT1-208ENST00000506368 HSPA1LP34931 641 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
SCLT1-208ENST00000506368 CAMK4Q16566 473 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 MCM10Q7L590 875 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 CCAR2Q8N163 923 aaKnown RBP18.69■□□□□ 0.58
SCLT1-208ENST00000506368 RHPN1Q8TCX5 695 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 JAKMIP1Q96N16 626 aaKnown RBP18.69■□□□□ 0.58
SCLT1-208ENST00000506368 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
SCLT1-208ENST00000506368 HIP1O00291 1037 aa18.68■□□□□ 0.58
SCLT1-208ENST00000506368 NRDCO43847 1150 aa18.68■□□□□ 0.58
SCLT1-208ENST00000506368 TPM4P67936 248 aa18.68■□□□□ 0.58
SCLT1-208ENST00000506368 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms