RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 SMC1BQ8NDV3 1235 aa14.35□□□□□ -0.11
SGCA-205ENST00000505964 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
SGCA-205ENST00000505964 CHMP4BQ9H444 224 aaKnown RBP14.35□□□□□ -0.11
SGCA-205ENST00000505964 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
SGCA-205ENST00000505964 COG6Q9Y2V7 657 aa14.35□□□□□ -0.11
SGCA-205ENST00000505964 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
SGCA-205ENST00000505964 NBPF26B4DH59 902 aa14.34□□□□□ -0.11
SGCA-205ENST00000505964 DDX58O95786 925 aaKnown RBP14.34□□□□□ -0.11
SGCA-205ENST00000505964 ANXA1P04083 346 aa14.34□□□□□ -0.11
SGCA-205ENST00000505964 HSPA1AP0DMV8 641 aaKnown RBP14.34□□□□□ -0.11
SGCA-205ENST00000505964 HSPA1BP0DMV9 641 aaKnown RBP14.34□□□□□ -0.11
SGCA-205ENST00000505964 NBPF10Q6P3W6 841 aaKnown RBP14.34□□□□□ -0.11
SGCA-205ENST00000505964 TMEM57Q8N5G2 664 aa14.34□□□□□ -0.11
SGCA-205ENST00000505964 NBPF15Q8N660 670 aa14.34□□□□□ -0.11
SGCA-205ENST00000505964 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
SGCA-205ENST00000505964 USP42Q9H9J4 1324 aaKnown RBP14.34□□□□□ -0.11
SGCA-205ENST00000505964 DICER1Q9UPY3 1922 aaKnown RBP14.33□□□□□ -0.11
SGCA-205ENST00000505964 A1BGP04217 495 aa14.33□□□□□ -0.12
SGCA-205ENST00000505964 MYL6BP14649 208 aa14.33□□□□□ -0.12
SGCA-205ENST00000505964 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
SGCA-205ENST00000505964 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
SGCA-205ENST00000505964 POLRMTO00411 1230 aaKnown RBP14.32□□□□□ -0.12
SGCA-205ENST00000505964 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
SGCA-205ENST00000505964 IBTKQ9P2D0 1353 aaPredicted RBP14.32□□□□□ -0.12
SGCA-205ENST00000505964 NRXN2Q9P2S2 1712 aa14.32□□□□□ -0.12
SGCA-205ENST00000505964 PI4KAP2A4QPH2 592 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 IL6STP40189 918 aaPredicted RBP14.31□□□□□ -0.12
SGCA-205ENST00000505964 COPS6Q7L5N1 327 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 PI4KAP1Q8N8J0 262 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 XAGE3Q8WTP9 111 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 DNAAF4Q8WXU2 420 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 ANKRD36CQ5JPF3 1778 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 NUP98P52948 1817 aa14.31□□□□□ -0.12
SGCA-205ENST00000505964 ANKRD31Q8N7Z5 1873 aa14.3□□□□□ -0.12
SGCA-205ENST00000505964 F6X3S4 739 aa14.3□□□□□ -0.12
SGCA-205ENST00000505964 USPL1Q5W0Q7 1092 aa14.3□□□□□ -0.12
SGCA-205ENST00000505964 ZBTB7BO15156 539 aaPredicted RBP14.29□□□□□ -0.12
SGCA-205ENST00000505964 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
SGCA-205ENST00000505964 TM4SF1P30408 202 aa14.29□□□□□ -0.12
SGCA-205ENST00000505964 INTS5Q6P9B9 1019 aaKnown RBP14.29□□□□□ -0.12
SGCA-205ENST00000505964 ANKRD13DQ6ZTN6 518 aa14.29□□□□□ -0.12
SGCA-205ENST00000505964 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
SGCA-205ENST00000505964 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
SGCA-205ENST00000505964 FER1L6Q2WGJ9 1857 aa14.29□□□□□ -0.12
SGCA-205ENST00000505964 GLTPD2A6NH11 291 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 ZPR1O75312 459 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 LMNB1P20700 586 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
SGCA-205ENST00000505964 EIF5P55010 431 aaKnown RBP14.28□□□□□ -0.12
SGCA-205ENST00000505964 AIMP1Q12904 312 aaKnown RBP14.28□□□□□ -0.12
SGCA-205ENST00000505964 SLC4A10Q6U841 1118 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 SRCIN1Q9C0H9 1055 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 ZBTB40Q9NUA8 1239 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 MAP3K2Q9Y2U5 619 aa14.28□□□□□ -0.12
SGCA-205ENST00000505964 COL11A2P13942 1736 aaPredicted RBP14.27□□□□□ -0.12
SGCA-205ENST00000505964 ALDH1L1O75891 902 aa14.27□□□□□ -0.13
SGCA-205ENST00000505964 BEND3Q5T5X7 828 aa14.27□□□□□ -0.13
SGCA-205ENST00000505964 METTL22Q9BUU2 404 aaPredicted RBP14.27□□□□□ -0.13
SGCA-205ENST00000505964 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
SGCA-205ENST00000505964 ZC3H4Q9UPT8 1303 aaKnown RBP14.26□□□□□ -0.13
SGCA-205ENST00000505964 NEXNQ0ZGT2 675 aa14.26□□□□□ -0.13
SGCA-205ENST00000505964 NFIXQ14938 502 aa14.26□□□□□ -0.13
SGCA-205ENST00000505964 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
SGCA-205ENST00000505964 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
SGCA-205ENST00000505964 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
SGCA-205ENST00000505964 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 A0A087WZG4 1122 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 POTECB2RU33 542 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 NFKBIEO00221 500 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 RGL2O15211 777 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 TTLL7Q6ZT98 887 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
SGCA-205ENST00000505964 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
SGCA-205ENST00000505964 COL15A1P39059 1388 aa14.24□□□□□ -0.13
SGCA-205ENST00000505964 SCN7AQ01118 1682 aa14.24□□□□□ -0.13
SGCA-205ENST00000505964 ERVV-1B6SEH8 477 aa14.24□□□□□ -0.13
SGCA-205ENST00000505964 GNAI3P08754 354 aa14.24□□□□□ -0.13
SGCA-205ENST00000505964 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
SGCA-205ENST00000505964 TTLL6Q8N841 843 aa14.24□□□□□ -0.13
SGCA-205ENST00000505964 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
SGCA-205ENST00000505964 SLX4Q8IY92 1834 aa14.23□□□□□ -0.13
SGCA-205ENST00000505964 SERPINB2P05120 415 aa14.23□□□□□ -0.13
SGCA-205ENST00000505964 HSP90AB3PQ58FF7 597 aa14.23□□□□□ -0.13
SGCA-205ENST00000505964 BCL2L12Q9HB09 334 aa14.23□□□□□ -0.13
SGCA-205ENST00000505964 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
SGCA-205ENST00000505964 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
SGCA-205ENST00000505964 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 DZIP3Q86Y13 1208 aaKnown RBP14.22□□□□□ -0.13
SGCA-205ENST00000505964 MEIS3Q99687 375 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 MYD88Q99836 296 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 USP44Q9H0E7 712 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 NARFQ9UHQ1 456 aa14.22□□□□□ -0.13
SGCA-205ENST00000505964 ZNF330Q9Y3S2 320 aaPredicted RBP14.22□□□□□ -0.13
SGCA-205ENST00000505964 UTYO14607 1347 aa14.21□□□□□ -0.13
SGCA-205ENST00000505964 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms