RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 NFATC2IPQ8NCF5 419 aa12.06□□□□□ -0.48
PTPN20-215ENST00000505814 PRKRIP1Q9H875 184 aaPredicted RBP12.06□□□□□ -0.48
PTPN20-215ENST00000505814 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
PTPN20-215ENST00000505814 THSD4Q6ZMP0 1018 aa12.05□□□□□ -0.48
PTPN20-215ENST00000505814 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
PTPN20-215ENST00000505814 GNAT3A8MTJ3 354 aa12.04□□□□□ -0.48
PTPN20-215ENST00000505814 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
PTPN20-215ENST00000505814 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
PTPN20-215ENST00000505814 TFCP2L1Q9NZI6 479 aa12.04□□□□□ -0.48
PTPN20-215ENST00000505814 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
PTPN20-215ENST00000505814 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
PTPN20-215ENST00000505814 U2AF1L5P0DN76 240 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-215ENST00000505814 ATP6V1AP38606 617 aa12.03□□□□□ -0.48
PTPN20-215ENST00000505814 U2AF1Q01081 240 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN20-215ENST00000505814 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-215ENST00000505814 ARIH1Q9Y4X5 557 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-215ENST00000505814 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
PTPN20-215ENST00000505814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
PTPN20-215ENST00000505814 NBR1Q14596 966 aa12.02□□□□□ -0.49
PTPN20-215ENST00000505814 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
PTPN20-215ENST00000505814 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.49
PTPN20-215ENST00000505814 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
PTPN20-215ENST00000505814 AK7Q96M32 723 aa12.01□□□□□ -0.49
PTPN20-215ENST00000505814 RPS6KA4O75676 772 aa12□□□□□ -0.49
PTPN20-215ENST00000505814 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
PTPN20-215ENST00000505814 LAPTM4BQ86VI4 370 aa12□□□□□ -0.49
PTPN20-215ENST00000505814 ARXQ96QS3 562 aa12□□□□□ -0.49
PTPN20-215ENST00000505814 SOS1Q07889 1333 aaPredicted RBP12□□□□□ -0.49
PTPN20-215ENST00000505814 C10orf71Q711Q0 1435 aa12□□□□□ -0.49
PTPN20-215ENST00000505814 GNPATO15228 680 aa11.99□□□□□ -0.49
PTPN20-215ENST00000505814 MAP3K7O43318 606 aa11.99□□□□□ -0.49
PTPN20-215ENST00000505814 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
PTPN20-215ENST00000505814 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
PTPN20-215ENST00000505814 ZNF790Q6PG37 636 aa11.99□□□□□ -0.49
PTPN20-215ENST00000505814 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
PTPN20-215ENST00000505814 FHDC1Q9C0D6 1143 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-215ENST00000505814 BRCA1P38398 1863 aaKnown RBP11.99□□□□□ -0.49
PTPN20-215ENST00000505814 PTCD1O75127 700 aaKnown RBP11.98□□□□□ -0.49
PTPN20-215ENST00000505814 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
PTPN20-215ENST00000505814 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
PTPN20-215ENST00000505814 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
PTPN20-215ENST00000505814 ZNF496Q96IT1 587 aaPredicted RBP11.98□□□□□ -0.49
PTPN20-215ENST00000505814 SYT17Q9BSW7 474 aa11.98□□□□□ -0.49
PTPN20-215ENST00000505814 USP42Q9H9J4 1324 aaKnown RBP11.97□□□□□ -0.49
PTPN20-215ENST00000505814 TRIM6-TRIM34B2RNG4 842 aa11.97□□□□□ -0.49
PTPN20-215ENST00000505814 COL15A1P39059 1388 aa11.96□□□□□ -0.49
PTPN20-215ENST00000505814 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-215ENST00000505814 GYS1P13807 737 aa11.96□□□□□ -0.49
PTPN20-215ENST00000505814 TEFQ10587 303 aa11.96□□□□□ -0.49
PTPN20-215ENST00000505814 MCM10Q7L590 875 aa11.96□□□□□ -0.49
PTPN20-215ENST00000505814 ARHGEF1Q92888 912 aaKnown RBP11.96□□□□□ -0.49
PTPN20-215ENST00000505814 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
PTPN20-215ENST00000505814 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.49
PTPN20-215ENST00000505814 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.49
PTPN20-215ENST00000505814 DLEC1Q9Y238 1755 aa11.95□□□□□ -0.5
PTPN20-215ENST00000505814 KCNQ3O43525 872 aa11.95□□□□□ -0.5
PTPN20-215ENST00000505814 AFDNP55196 1824 aaKnown RBP11.95□□□□□ -0.5
PTPN20-215ENST00000505814 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
PTPN20-215ENST00000505814 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
PTPN20-215ENST00000505814 POLD1P28340 1107 aa11.94□□□□□ -0.5
PTPN20-215ENST00000505814 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
PTPN20-215ENST00000505814 DCTN1Q14203 1278 aa11.94□□□□□ -0.5
PTPN20-215ENST00000505814 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
PTPN20-215ENST00000505814 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
PTPN20-215ENST00000505814 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
PTPN20-215ENST00000505814 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
PTPN20-215ENST00000505814 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
PTPN20-215ENST00000505814 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
PTPN20-215ENST00000505814 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
PTPN20-215ENST00000505814 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-215ENST00000505814 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 NLGN2Q8NFZ4 835 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-215ENST00000505814 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 SEPT9Q9UHD8 586 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-215ENST00000505814 ADAMTS8Q9UP79 889 aa11.92□□□□□ -0.5
PTPN20-215ENST00000505814 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 TM4SF1P30408 202 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 IL6STP40189 918 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-215ENST00000505814 DDR1Q08345 913 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 CCDC184Q52MB2 194 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
PTPN20-215ENST00000505814 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
PTPN20-215ENST00000505814 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
PTPN20-215ENST00000505814 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
PTPN20-215ENST00000505814 PRAMEF22A3QJZ6 481 aa11.9□□□□□ -0.5
PTPN20-215ENST00000505814 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
PTPN20-215ENST00000505814 MMP10P09238 476 aa11.9□□□□□ -0.5
PTPN20-215ENST00000505814 COL11A2P13942 1736 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-215ENST00000505814 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
PTPN20-215ENST00000505814 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
PTPN20-215ENST00000505814 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
PTPN20-215ENST00000505814 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
PTPN20-215ENST00000505814 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.51
PTPN20-215ENST00000505814 STARD3NLO95772 234 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms