RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KANK4Q5T7N3 995 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-208ENST00000505553 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
TRAPPC13-208ENST00000505553 PCMTD2Q9NV79 361 aa6.34□□□□□ -1.39
TRAPPC13-208ENST00000505553 NID1P14543 1247 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 SELPP16109 830 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 RAC1P63000 192 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 EFSO43281 561 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 ALBP02768 609 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 MAP7D1Q3KQU3 841 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 PLEKHM2Q8IWE5 1019 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 TNFRSF25Q93038 417 aa6.33□□□□□ -1.4
TRAPPC13-208ENST00000505553 NEUROD1Q13562 356 aa6.32□□□□□ -1.4
TRAPPC13-208ENST00000505553 ZIC5Q96T25 663 aa6.32□□□□□ -1.4
TRAPPC13-208ENST00000505553 STRN4Q9NRL3 753 aa6.32□□□□□ -1.4
TRAPPC13-208ENST00000505553 CHIC2Q9UKJ5 165 aa6.32□□□□□ -1.4
TRAPPC13-208ENST00000505553 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-208ENST00000505553 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP17L3A6NCW0 530 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP17L4A6NCW7 530 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 FAM196BA6NMK8 535 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 SKIP12755 728 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 ERCC3P19447 782 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 ARID4AP29374 1257 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 TMEM164Q5U3C3 297 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP17L2Q6R6M4 530 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP17L1Q7RTZ2 530 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP21Q9UK80 565 aa6.31□□□□□ -1.4
TRAPPC13-208ENST00000505553 A0A0A0MRY4 1105 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP17L5A8MUK1 530 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 LZTS3O60299 673 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 LILRB5O75023 590 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 STAU1O95793 577 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 LARP1Q6PKG0 1096 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 BICDL1Q6ZP65 573 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 SLC51AQ86UW1 340 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 TXNDC2Q86VQ3 553 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
TRAPPC13-208ENST00000505553 INHAP05111 366 aa6.29□□□□□ -1.4
TRAPPC13-208ENST00000505553 ADH7P40394 386 aa6.29□□□□□ -1.4
TRAPPC13-208ENST00000505553 GDF10P55107 478 aa6.29□□□□□ -1.4
TRAPPC13-208ENST00000505553 SSBP4Q9BWG4 385 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC13-208ENST00000505553 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
TRAPPC13-208ENST00000505553 PIK3CDO00329 1044 aa6.28□□□□□ -1.4
TRAPPC13-208ENST00000505553 SMTNP53814 917 aa6.28□□□□□ -1.4
TRAPPC13-208ENST00000505553 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
TRAPPC13-208ENST00000505553 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
TRAPPC13-208ENST00000505553 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
TRAPPC13-208ENST00000505553 USP17L15C9J2P7 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L10C9JJH3 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L13C9JLJ4 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L12C9JPN9 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L11C9JVI0 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L21D6R901 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L18D6R9N7 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L22D6RA61 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L17D6RBQ6 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L19D6RCP7 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L20D6RJB6 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 SSFA2P28290 1259 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 SCNN1DP51172 638 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 USP17L24Q0WX57 530 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 FAM200AQ8TCP9 573 aa6.27□□□□□ -1.41
TRAPPC13-208ENST00000505553 RBM47A0AV96 593 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 TAL1P17542 331 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 RASA1P20936 1047 aa6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 SHISA2Q6UWI4 295 aa6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 CLP1Q92989 425 aaKnown RBP6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 SERTAD1Q9UHV2 236 aa6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-208ENST00000505553 NEUROD4Q9HD90 331 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 CABP1Q9NZU7 370 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 SHROOM4Q9ULL8 1493 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 CDK2AP1O14519 115 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 PTK7Q13308 1070 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 NCOA4Q13772 614 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 SWI5Q1ZZU3 235 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 EML3Q32P44 896 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 CRTC2Q53ET0 693 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 PHLDB3Q6NSJ2 640 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 DEPDC4Q8N2C3 294 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 NOD1Q9Y239 953 aa6.25□□□□□ -1.41
TRAPPC13-208ENST00000505553 A6NJY4 79 aa6.24□□□□□ -1.41
TRAPPC13-208ENST00000505553 BACH1O14867 736 aa6.24□□□□□ -1.41
TRAPPC13-208ENST00000505553 SSTR4P31391 388 aa6.24□□□□□ -1.41
TRAPPC13-208ENST00000505553 TRIM50Q86XT4 487 aa6.24□□□□□ -1.41
TRAPPC13-208ENST00000505553 ANKMY2Q8IV38 441 aa6.24□□□□□ -1.41
TRAPPC13-208ENST00000505553 SLC4A9Q96Q91 983 aa6.24□□□□□ -1.41
TRAPPC13-208ENST00000505553 IGSF3O75054 1194 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 ATP2B4P23634 1241 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 ATP1A2P50993 1020 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 PSME1Q06323 249 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 SPEM2Q0P670 501 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 ZNF295-AS1Q8N0V1 137 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 FMR1NBQ8N0W7 255 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 WFDC12Q8WWY7 111 aa6.23□□□□□ -1.41
TRAPPC13-208ENST00000505553 SLC30A3Q99726 388 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms