RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 RNF123Q5XPI4 1314 aa20.48■□□□□ 0.87
PDCD6-203ENST00000505526 FZD9O00144 591 aa20.48■□□□□ 0.87
PDCD6-203ENST00000505526 ALDH1B1P30837 517 aa20.48■□□□□ 0.87
PDCD6-203ENST00000505526 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
PDCD6-203ENST00000505526 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
PDCD6-203ENST00000505526 WBP1LQ9NX94 342 aa20.48■□□□□ 0.87
PDCD6-203ENST00000505526 MAP1SQ66K74 1059 aaPredicted RBP20.47■□□□□ 0.87
PDCD6-203ENST00000505526 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
PDCD6-203ENST00000505526 DLG5Q8TDM6 1919 aa20.47■□□□□ 0.87
PDCD6-203ENST00000505526 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
PDCD6-203ENST00000505526 LBX1P52954 281 aa20.46■□□□□ 0.87
PDCD6-203ENST00000505526 GPC2Q8N158 579 aa20.46■□□□□ 0.87
PDCD6-203ENST00000505526 RASSF10A6NK89 507 aa20.45■□□□□ 0.86
PDCD6-203ENST00000505526 HLFQ16534 295 aa20.45■□□□□ 0.86
PDCD6-203ENST00000505526 DEFB115Q30KQ5 88 aa20.45■□□□□ 0.86
PDCD6-203ENST00000505526 DCTN1Q14203 1278 aa20.43■□□□□ 0.86
PDCD6-203ENST00000505526 NGEFQ8N5V2 710 aa20.43■□□□□ 0.86
PDCD6-203ENST00000505526 JDP2Q8WYK2 163 aa20.43■□□□□ 0.86
PDCD6-203ENST00000505526 PSMD1Q99460 953 aa20.43■□□□□ 0.86
PDCD6-203ENST00000505526 TRIM35Q9UPQ4 493 aa20.43■□□□□ 0.86
PDCD6-203ENST00000505526 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
PDCD6-203ENST00000505526 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
PDCD6-203ENST00000505526 SNED1Q8TER0 1413 aa20.42■□□□□ 0.86
PDCD6-203ENST00000505526 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
PDCD6-203ENST00000505526 CCDC27Q2M243 656 aa20.42■□□□□ 0.86
PDCD6-203ENST00000505526 ABT1Q9ULW3 272 aaKnown RBP20.42■□□□□ 0.86
PDCD6-203ENST00000505526 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
PDCD6-203ENST00000505526 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
PDCD6-203ENST00000505526 HSPA8P11142 646 aaKnown RBP20.41■□□□□ 0.86
PDCD6-203ENST00000505526 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
PDCD6-203ENST00000505526 WWC1Q8IX03 1113 aa20.41■□□□□ 0.86
PDCD6-203ENST00000505526 GJA3Q9Y6H8 435 aa20.41■□□□□ 0.86
PDCD6-203ENST00000505526 EIF6P56537 245 aaKnown RBP20.4■□□□□ 0.86
PDCD6-203ENST00000505526 MAP2K1Q02750 393 aaPredicted RBP20.4■□□□□ 0.86
PDCD6-203ENST00000505526 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
PDCD6-203ENST00000505526 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
PDCD6-203ENST00000505526 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
PDCD6-203ENST00000505526 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
PDCD6-203ENST00000505526 ABCC12Q96J65 1359 aa20.4■□□□□ 0.86
PDCD6-203ENST00000505526 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
PDCD6-203ENST00000505526 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDCD6-203ENST00000505526 LMOD1P29536 600 aaPredicted RBP20.38■□□□□ 0.85
PDCD6-203ENST00000505526 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
PDCD6-203ENST00000505526 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
PDCD6-203ENST00000505526 COL4A5P29400 1685 aa20.38■□□□□ 0.85
PDCD6-203ENST00000505526 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
PDCD6-203ENST00000505526 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
PDCD6-203ENST00000505526 ABHD8Q96I13 439 aa20.37■□□□□ 0.85
PDCD6-203ENST00000505526 LTBP1Q14766 1721 aa20.36■□□□□ 0.85
PDCD6-203ENST00000505526 LAMB4A4D0S4 1761 aa20.36■□□□□ 0.85
PDCD6-203ENST00000505526 HOXA10P31260 410 aaPredicted RBP20.36■□□□□ 0.85
PDCD6-203ENST00000505526 EPS15P42566 896 aa20.36■□□□□ 0.85
PDCD6-203ENST00000505526 SCNN1DP51172 638 aa20.36■□□□□ 0.85
PDCD6-203ENST00000505526 GRIPAP1Q4V328 841 aa20.36■□□□□ 0.85
PDCD6-203ENST00000505526 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
PDCD6-203ENST00000505526 MAP3K15Q6ZN16 1313 aa20.35■□□□□ 0.85
PDCD6-203ENST00000505526 FMR1Q06787 632 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDCD6-203ENST00000505526 GPTP24298 496 aa20.34■□□□□ 0.85
PDCD6-203ENST00000505526 KIF6Q6ZMV9 814 aa20.34■□□□□ 0.85
PDCD6-203ENST00000505526 PAXIP1Q6ZW49 1069 aaPredicted RBP20.34■□□□□ 0.85
PDCD6-203ENST00000505526 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
PDCD6-203ENST00000505526 CAPNS2Q96L46 248 aa20.34■□□□□ 0.85
PDCD6-203ENST00000505526 NUP98P52948 1817 aa20.33■□□□□ 0.85
PDCD6-203ENST00000505526 RIC1Q4ADV7 1423 aa20.33■□□□□ 0.85
PDCD6-203ENST00000505526 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.85
PDCD6-203ENST00000505526 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.85
PDCD6-203ENST00000505526 RBM17Q96I25 401 aaKnown RBP20.33■□□□□ 0.85
PDCD6-203ENST00000505526 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.85
PDCD6-203ENST00000505526 UBN2Q6ZU65 1347 aa20.33■□□□□ 0.84
PDCD6-203ENST00000505526 IBTKQ9P2D0 1353 aaPredicted RBP20.33■□□□□ 0.84
PDCD6-203ENST00000505526 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
PDCD6-203ENST00000505526 PPEF1O14829 653 aaPredicted RBP20.32■□□□□ 0.84
PDCD6-203ENST00000505526 ECE1P42892 770 aa20.32■□□□□ 0.84
PDCD6-203ENST00000505526 CALD1Q05682 793 aaKnown RBP20.32■□□□□ 0.84
PDCD6-203ENST00000505526 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
PDCD6-203ENST00000505526 SUSD4Q5VX71 490 aa20.32■□□□□ 0.84
PDCD6-203ENST00000505526 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
PDCD6-203ENST00000505526 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
PDCD6-203ENST00000505526 ZBTB3Q9H5J0 574 aa20.32■□□□□ 0.84
PDCD6-203ENST00000505526 MYL6BP14649 208 aa20.31■□□□□ 0.84
PDCD6-203ENST00000505526 GRM1Q13255 1194 aa20.31■□□□□ 0.84
PDCD6-203ENST00000505526 CST9Q5W186 159 aa20.31■□□□□ 0.84
PDCD6-203ENST00000505526 CYP4F22Q6NT55 531 aa20.31■□□□□ 0.84
PDCD6-203ENST00000505526 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
PDCD6-203ENST00000505526 GPR101Q96P66 508 aaPredicted RBP20.31■□□□□ 0.84
PDCD6-203ENST00000505526 THSD7BQ9C0I4 1608 aa20.31■□□□□ 0.84
PDCD6-203ENST00000505526 TRAF5O00463 557 aa20.3■□□□□ 0.84
PDCD6-203ENST00000505526 CDCA7LQ96GN5 454 aa20.3■□□□□ 0.84
PDCD6-203ENST00000505526 EIF4A1P60842 406 aaKnown RBP20.3■□□□□ 0.84
PDCD6-203ENST00000505526 FAM161AQ3B820 660 aa20.3■□□□□ 0.84
PDCD6-203ENST00000505526 ZNF34Q8IZ26 560 aa20.3■□□□□ 0.84
PDCD6-203ENST00000505526 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
PDCD6-203ENST00000505526 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
PDCD6-203ENST00000505526 IL16Q14005 1332 aa20.3■□□□□ 0.84
PDCD6-203ENST00000505526 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
PDCD6-203ENST00000505526 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
PDCD6-203ENST00000505526 NTSR2O95665 410 aa20.29■□□□□ 0.84
PDCD6-203ENST00000505526 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
PDCD6-203ENST00000505526 TLL2Q9Y6L7 1015 aa20.29■□□□□ 0.84
PDCD6-203ENST00000505526 AOC3Q16853 763 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms