RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 RGL2O15211 777 aa15.52■□□□□ 0.08
CCHCR1-219ENST00000505392 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
CCHCR1-219ENST00000505392 NUTM1Q86Y26 1132 aa15.52■□□□□ 0.08
CCHCR1-219ENST00000505392 MCOLN1Q9GZU1 580 aa15.52■□□□□ 0.08
CCHCR1-219ENST00000505392 TCERG1O14776 1098 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-219ENST00000505392 CRY2Q49AN0 593 aa15.51■□□□□ 0.07
CCHCR1-219ENST00000505392 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
CCHCR1-219ENST00000505392 ARFGEF2Q9Y6D5 1785 aa15.51■□□□□ 0.07
CCHCR1-219ENST00000505392 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 GRIPAP1Q4V328 841 aa15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 MCM10Q7L590 875 aa15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 SAPCD2Q86UD0 394 aa15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 NYXQ9GZU5 481 aa15.5■□□□□ 0.07
CCHCR1-219ENST00000505392 CA12O43570 354 aa15.49■□□□□ 0.07
CCHCR1-219ENST00000505392 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-219ENST00000505392 NIM1KQ8IY84 436 aa15.49■□□□□ 0.07
CCHCR1-219ENST00000505392 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-219ENST00000505392 ADARB2Q9NS39 739 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-219ENST00000505392 HOXA10P31260 410 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-219ENST00000505392 DGKZQ13574 1117 aa15.48■□□□□ 0.07
CCHCR1-219ENST00000505392 GPRC5DQ9NZD1 345 aa15.48■□□□□ 0.07
CCHCR1-219ENST00000505392 SNED1Q8TER0 1413 aa15.48■□□□□ 0.07
CCHCR1-219ENST00000505392 KIF7Q2M1P5 1343 aa15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 DCTN1Q14203 1278 aa15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 RBM17Q96I25 401 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 GLIS2Q9BZE0 524 aaPredicted RBP15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 COL4A5P29400 1685 aa15.47■□□□□ 0.07
CCHCR1-219ENST00000505392 ERVV-1B6SEH8 477 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 PPEF1O14829 653 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 PPIP5K2O43314 1243 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 CIAPIN1Q6FI81 312 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 HHIPL1Q96JK4 782 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 CRAMP1Q96RY5 1269 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 ZNF408Q9H9D4 720 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 MIS18AQ9NYP9 233 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 BCORQ6W2J9 1755 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 ABCC12Q96J65 1359 aa15.46■□□□□ 0.07
CCHCR1-219ENST00000505392 LTBP1Q14766 1721 aa15.46■□□□□ 0.06
CCHCR1-219ENST00000505392 GPTP24298 496 aa15.45■□□□□ 0.06
CCHCR1-219ENST00000505392 CXCL9Q07325 125 aa15.45■□□□□ 0.06
CCHCR1-219ENST00000505392 AOC3Q16853 763 aa15.45■□□□□ 0.06
CCHCR1-219ENST00000505392 SUSD4Q5VX71 490 aa15.45■□□□□ 0.06
CCHCR1-219ENST00000505392 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-219ENST00000505392 VPS33BQ9H267 617 aa15.44■□□□□ 0.06
CCHCR1-219ENST00000505392 PGAP2Q9UHJ9 254 aa15.44■□□□□ 0.06
CCHCR1-219ENST00000505392 ZNRF3Q9ULT6 936 aa15.44■□□□□ 0.06
CCHCR1-219ENST00000505392 RRP7AQ9Y3A4 280 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-219ENST00000505392 SIPA1L3O60292 1781 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-219ENST00000505392 GMPSP49915 693 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 CDC37L1Q7L3B6 337 aa15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 ZIC5Q96T25 663 aa15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 NPC1L1Q9UHC9 1359 aa15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
CCHCR1-219ENST00000505392 HIRAP54198 1017 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 KIF6Q6ZMV9 814 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 C3orf67Q6ZVT6 689 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 ZC3H15Q8WU90 426 aaKnown RBP15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 BCL2L13Q9BXK5 485 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 NUDCQ9Y266 331 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
CCHCR1-219ENST00000505392 HTATSF1O43719 755 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 MYL6BP14649 208 aa15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 NOGQ13253 232 aa15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 SUPT20HQ8NEM7 779 aa15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 ZBTB3Q9H5J0 574 aa15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 THSD7BQ9C0I4 1608 aa15.41■□□□□ 0.06
CCHCR1-219ENST00000505392 RAD17O75943 681 aa15.4■□□□□ 0.06
CCHCR1-219ENST00000505392 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
CCHCR1-219ENST00000505392 CASP8AP2Q9UKL3 1982 aa15.4■□□□□ 0.06
CCHCR1-219ENST00000505392 NTSR2O95665 410 aa15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 HUNKP57058 714 aa15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 TNIP1Q15025 636 aa15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 DLK2Q6UY11 383 aa15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 USP48Q86UV5 1035 aa15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 RTFDC1Q9BY42 306 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 CNOT7Q9UIV1 285 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-219ENST00000505392 TRPM7Q96QT4 1865 aa15.38■□□□□ 0.05
CCHCR1-219ENST00000505392 SOX10P56693 466 aa15.38■□□□□ 0.05
CCHCR1-219ENST00000505392 DPP8Q6V1X1 898 aaPredicted RBP15.38■□□□□ 0.05
CCHCR1-219ENST00000505392 MPNDQ8N594 471 aa15.38■□□□□ 0.05
CCHCR1-219ENST00000505392 TRPM4Q8TD43 1214 aa15.38■□□□□ 0.05
CCHCR1-219ENST00000505392 SHTN1A0MZ66 631 aa15.37■□□□□ 0.05
CCHCR1-219ENST00000505392 H7C1D1 291 aa15.37■□□□□ 0.05
CCHCR1-219ENST00000505392 BBOX1O75936 387 aa15.37■□□□□ 0.05
CCHCR1-219ENST00000505392 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms