RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 TBC1D2Q9BYX2 928 aa19.33■□□□□ 0.69
ITGA3-204ENST00000505306 CCDC194A0A1B0GVG4 234 aa19.33■□□□□ 0.68
ITGA3-204ENST00000505306 SERPINC1P01008 464 aa19.33■□□□□ 0.68
ITGA3-204ENST00000505306 MFSD6Q6ZSS7 791 aa19.33■□□□□ 0.68
ITGA3-204ENST00000505306 CCDC83Q8IWF9 413 aa19.33■□□□□ 0.68
ITGA3-204ENST00000505306 TNMDQ9H2S6 317 aa19.33■□□□□ 0.68
ITGA3-204ENST00000505306 STX8Q9UNK0 236 aa19.33■□□□□ 0.68
ITGA3-204ENST00000505306 SPC24Q8NBT2 197 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 ZMYND15Q9H091 742 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 HAND2P61296 217 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 NLRP5P59047 1200 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 DISP1Q96F81 1524 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 KIF5BP33176 963 aa19.32■□□□□ 0.68
ITGA3-204ENST00000505306 DHX8Q14562 1220 aaKnown RBP19.32■□□□□ 0.68
ITGA3-204ENST00000505306 TMEM87AQ8NBN3 555 aa19.31■□□□□ 0.68
ITGA3-204ENST00000505306 NAA16Q6N069 864 aaPredicted RBP19.31■□□□□ 0.68
ITGA3-204ENST00000505306 IL15P40933 162 aaPredicted RBP19.31■□□□□ 0.68
ITGA3-204ENST00000505306 CAGE1Q8TC20 777 aa19.31■□□□□ 0.68
ITGA3-204ENST00000505306 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
ITGA3-204ENST00000505306 A0A1W2PP64 1363 aa19.31■□□□□ 0.68
ITGA3-204ENST00000505306 TRIM21P19474 475 aaKnown RBP19.31■□□□□ 0.68
ITGA3-204ENST00000505306 PRIM1P49642 420 aaKnown RBP19.31■□□□□ 0.68
ITGA3-204ENST00000505306 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
ITGA3-204ENST00000505306 RBM17Q96I25 401 aaKnown RBP19.3■□□□□ 0.68
ITGA3-204ENST00000505306 TMEM2Q9UHN6 1383 aa19.3■□□□□ 0.68
ITGA3-204ENST00000505306 NEO1Q92859 1461 aa19.3■□□□□ 0.68
ITGA3-204ENST00000505306 C8orf58Q8NAV2 365 aa19.3■□□□□ 0.68
ITGA3-204ENST00000505306 C8orf76Q96K31 380 aa19.3■□□□□ 0.68
ITGA3-204ENST00000505306 MPHOSPH6Q99547 160 aaKnown RBP19.3■□□□□ 0.68
ITGA3-204ENST00000505306 SHANK2Q9UPX8 1470 aa19.3■□□□□ 0.68
ITGA3-204ENST00000505306 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
ITGA3-204ENST00000505306 TRMT1LQ7Z2T5 733 aaKnown RBP19.3■□□□□ 0.68
ITGA3-204ENST00000505306 ASXL1Q8IXJ9 1541 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 FERMT3Q86UX7 667 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 LINS1Q8NG48 757 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 RHPN1Q8TCX5 695 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 GJA3Q9Y6H8 435 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 TMEM266Q2M3C6 531 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 ZFYVE16Q7Z3T8 1539 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 HELBQ8NG08 1087 aaPredicted RBP19.29■□□□□ 0.68
ITGA3-204ENST00000505306 CCDC12Q8WUD4 166 aaPredicted RBP19.29■□□□□ 0.68
ITGA3-204ENST00000505306 MEIS3Q99687 375 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 DEF6Q9H4E7 631 aa19.29■□□□□ 0.68
ITGA3-204ENST00000505306 SEPT11Q9NVA2 429 aaKnown RBP19.28■□□□□ 0.68
ITGA3-204ENST00000505306 TSPY3P0CV98 308 aa19.28■□□□□ 0.68
ITGA3-204ENST00000505306 TSPY8P0CW00 308 aa19.28■□□□□ 0.68
ITGA3-204ENST00000505306 ANKRD2Q9GZV1 360 aa19.28■□□□□ 0.68
ITGA3-204ENST00000505306 PDIA4P13667 645 aaKnown RBP19.27■□□□□ 0.68
ITGA3-204ENST00000505306 LTKP29376 864 aa19.27■□□□□ 0.68
ITGA3-204ENST00000505306 CCDC192P0DO97 292 aa19.27■□□□□ 0.68
ITGA3-204ENST00000505306 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.68
ITGA3-204ENST00000505306 PPFIBP1Q86W92 1011 aa19.27■□□□□ 0.68
ITGA3-204ENST00000505306 RUFY1Q96T51 708 aa19.27■□□□□ 0.68
ITGA3-204ENST00000505306 PRDM10Q9NQV6 1147 aa19.27■□□□□ 0.68
ITGA3-204ENST00000505306 PPP1R12BO60237 982 aaPredicted RBP19.27■□□□□ 0.67
ITGA3-204ENST00000505306 NOM1Q5C9Z4 860 aaKnown RBP19.27■□□□□ 0.67
ITGA3-204ENST00000505306 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.67
ITGA3-204ENST00000505306 UBA5Q9GZZ9 404 aa19.27■□□□□ 0.67
ITGA3-204ENST00000505306 LUC7LQ9NQ29 371 aaKnown RBP19.27■□□□□ 0.67
ITGA3-204ENST00000505306 SLC4A4Q9Y6R1 1079 aa19.27■□□□□ 0.67
ITGA3-204ENST00000505306 GUCY1B3Q02153 619 aa19.26■□□□□ 0.67
ITGA3-204ENST00000505306 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
ITGA3-204ENST00000505306 CCT2P78371 535 aaKnown RBP19.26■□□□□ 0.67
ITGA3-204ENST00000505306 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
ITGA3-204ENST00000505306 ZFYP08048 801 aaPredicted RBP19.25■□□□□ 0.67
ITGA3-204ENST00000505306 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
ITGA3-204ENST00000505306 MICU3Q86XE3 530 aa19.25■□□□□ 0.67
ITGA3-204ENST00000505306 SYCE3A1L190 88 aa19.25■□□□□ 0.67
ITGA3-204ENST00000505306 NCOA7Q8NI08 942 aa19.25■□□□□ 0.67
ITGA3-204ENST00000505306 ARHGAP45Q92619 1136 aa19.25■□□□□ 0.67
ITGA3-204ENST00000505306 CALRP27797 417 aaKnown RBP19.25■□□□□ 0.67
ITGA3-204ENST00000505306 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
ITGA3-204ENST00000505306 DESP17661 470 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 LIG1P18858 919 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 CLCN1P35523 988 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 TCOF1Q13428 1488 aaKnown RBP19.24■□□□□ 0.67
ITGA3-204ENST00000505306 SAMM50Q9Y512 469 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 SH2B1Q9NRF2 756 aaPredicted RBP19.24■□□□□ 0.67
ITGA3-204ENST00000505306 HSP90B2PQ58FF3 399 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 SLC9C2Q5TAH2 1124 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
ITGA3-204ENST00000505306 VTI1AQ96AJ9 217 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 DNAI2Q9GZS0 605 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 ACBD3Q9H3P7 528 aa19.24■□□□□ 0.67
ITGA3-204ENST00000505306 ECM2O94769 699 aaPredicted RBP19.23■□□□□ 0.67
ITGA3-204ENST00000505306 PARP10Q53GL7 1025 aa19.23■□□□□ 0.67
ITGA3-204ENST00000505306 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
ITGA3-204ENST00000505306 PHACTR3Q96KR7 559 aa19.23■□□□□ 0.67
ITGA3-204ENST00000505306 JAG2Q9Y219 1238 aa19.23■□□□□ 0.67
ITGA3-204ENST00000505306 H0YIN7 160 aa19.23■□□□□ 0.67
ITGA3-204ENST00000505306 CWC15Q9P013 229 aaKnown RBP19.23■□□□□ 0.67
ITGA3-204ENST00000505306 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
ITGA3-204ENST00000505306 ZFYVE9O95405 1425 aa19.23■□□□□ 0.67
ITGA3-204ENST00000505306 PDCL2Q8N4E4 241 aa19.22■□□□□ 0.67
ITGA3-204ENST00000505306 SBNO1A3KN83 1393 aa19.22■□□□□ 0.67
ITGA3-204ENST00000505306 CDR1P51861 262 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms