RNA–Protein interactions for RNA: ENST00000505214.1

AC055733.3-201, humanhuman

BASIC

Gene AC055733.3, Length 523 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.3-201ENST00000505214 LRRFIP1Q32MZ4 808 aaKnown RBP8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 TOM1L2Q6ZVM7 507 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 COPS6Q7L5N1 327 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 LRP10Q7Z4F1 713 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 FAM43AQ8N2R8 423 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 MYD88Q99836 296 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 ATG3Q9NT62 314 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 LIMCH1Q9UPQ0 1083 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 DDX49Q9Y6V7 483 aaKnown RBP8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 CCDC171Q6TFL3 1326 aa8.74□□□□□ -1.01
AC055733.3-201ENST00000505214 ABCC12Q96J65 1359 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 BRD1O95696 1058 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 ATP5JP18859 108 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 ZNF445P59923 1031 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 AIMP1Q12904 312 aaKnown RBP8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 CHRNA2Q15822 529 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 UNC5CLQ8IV45 518 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 CCDC191Q8NCU4 936 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 CHMP4CQ96CF2 233 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 KAZALD1Q96I82 304 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 GRPEL1Q9HAV7 217 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 CWC25Q9NXE8 425 aaPredicted RBP8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 CYP46A1Q9Y6A2 500 aa8.73□□□□□ -1.01
AC055733.3-201ENST00000505214 TCHHQ07283 1943 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 CIAO1O76071 339 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 MYL6BP14649 208 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 ALDH8A1Q9H2A2 487 aaPredicted RBP8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 PALD1Q9ULE6 856 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 SNX14Q9Y5W7 946 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 PALLDQ8WX93 1383 aa8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 RPAP1Q9BWH6 1393 aaPredicted RBP8.72□□□□□ -1.01
AC055733.3-201ENST00000505214 NWD2Q9ULI1 1742 aa8.71□□□□□ -1.01
AC055733.3-201ENST00000505214 LAMB2P55268 1798 aa8.71□□□□□ -1.01
AC055733.3-201ENST00000505214 A0A087WZG4 1122 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 PRAMEF22A3QJZ6 481 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 SASH1O94885 1247 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 PDCP20941 246 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 KCNJ4P48050 445 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 TRIM28Q13263 835 aaKnown RBP8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 TSGA10IPQ3SY00 556 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 TNNI3KQ59H18 835 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 CWC27Q6UX04 472 aaKnown RBP8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 UBE3BQ7Z3V4 1068 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 TTC14Q96N46 770 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 FSD1Q9BTV5 496 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 FOXD4L1Q9NU39 408 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 FPGT-TNNI3KV9GXZ4 949 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 ZNF831Q5JPB2 1677 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 ARAP2Q8WZ64 1704 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 DISP2A7MBM2 1401 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 ZNF609O15014 1411 aa8.71□□□□□ -1.02
AC055733.3-201ENST00000505214 RREB1Q92766 1687 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 ROBO1Q9Y6N7 1651 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 H7C1W4 665 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 IL15P40933 162 aaPredicted RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 RFX5P48382 616 aaPredicted RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 CASP7P55210 303 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 EVA1CP58658 441 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 ZGPATQ8N5A5 531 aaKnown RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 MAP4K1Q92918 833 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 EAF2Q96CJ1 260 aaPredicted RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 CDCA7Q9BWT1 371 aaPredicted RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 GZF1Q9H116 711 aaPredicted RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 ZSWIM6Q9HCJ5 1215 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 LMBRD1Q9NUN5 540 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 TMOD3Q9NYL9 352 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 PA2G4Q9UQ80 394 aaKnown RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 U3KPZ7 1027 aaPredicted RBP8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 SH3TC1Q8TE82 1336 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 NUP98P52948 1817 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 MYH15Q9Y2K3 1946 aa8.7□□□□□ -1.02
AC055733.3-201ENST00000505214 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 PHLPP1O60346 1717 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 NRAPQ86VF7 1730 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 DOT1LQ8TEK3 1739 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 LAMA4Q16363 1823 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 STARD3NLO95772 234 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 HMGB1P09429 215 aaKnown RBP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 XRCC6P12956 609 aaKnown RBP eCLIP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 CASTP20810 708 aaKnown RBP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 PTPN12Q05209 780 aaKnown RBP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 CCDC173Q0VFZ6 552 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 NECTIN1Q15223 517 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 KIF6Q6ZMV9 814 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 RUFY3Q7L099 469 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 DDX17Q92841 729 aaKnown RBP8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 HAUS7Q99871 368 aa8.69□□□□□ -1.02
AC055733.3-201ENST00000505214 UPF3BQ9BZI7 483 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms