RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 FHDC1Q9C0D6 1143 aaPredicted RBP15.83■□□□□ 0.12
SNCA-208ENST00000505199 CWC25Q9NXE8 425 aaPredicted RBP15.83■□□□□ 0.12
SNCA-208ENST00000505199 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.12
SNCA-208ENST00000505199 NPHP1O15259 732 aa15.82■□□□□ 0.12
SNCA-208ENST00000505199 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
SNCA-208ENST00000505199 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
SNCA-208ENST00000505199 NEURL1BA8MQ27 555 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 PCCAP05165 728 aaPredicted RBP15.81■□□□□ 0.12
SNCA-208ENST00000505199 MS4A1P11836 297 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 GPTP24298 496 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 CRY2Q49AN0 593 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 BEND3Q5T5X7 828 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 MYD88Q99836 296 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 CDHR2Q9BYE9 1310 aa15.81■□□□□ 0.12
SNCA-208ENST00000505199 TRMT112Q9UI30 125 aaKnown RBP15.81■□□□□ 0.12
SNCA-208ENST00000505199 LAMB2P55268 1798 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 DLEC1Q9Y238 1755 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 IGKV5-2P06315 115 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 CCT4P50991 539 aaKnown RBP15.8■□□□□ 0.12
SNCA-208ENST00000505199 GCKRQ14397 625 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 BCL2L13Q9BXK5 485 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 SRCIN1Q9C0H9 1055 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 NOB1Q9ULX3 412 aaKnown RBP15.8■□□□□ 0.12
SNCA-208ENST00000505199 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
SNCA-208ENST00000505199 ZKSCAN2Q63HK3 967 aa15.79■□□□□ 0.12
SNCA-208ENST00000505199 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
SNCA-208ENST00000505199 HDAC5Q9UQL6 1122 aa15.79■□□□□ 0.12
SNCA-208ENST00000505199 BRCA1P38398 1863 aaKnown RBP15.78■□□□□ 0.12
SNCA-208ENST00000505199 UTYO14607 1347 aa15.78■□□□□ 0.12
SNCA-208ENST00000505199 ABCC4O15439 1325 aa15.78■□□□□ 0.12
SNCA-208ENST00000505199 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
SNCA-208ENST00000505199 H0YIN7 160 aa15.78■□□□□ 0.12
SNCA-208ENST00000505199 NLRP3Q96P20 1036 aa15.78■□□□□ 0.12
SNCA-208ENST00000505199 F6X3S4 739 aa15.77■□□□□ 0.12
SNCA-208ENST00000505199 H7C1W4 665 aa15.77■□□□□ 0.12
SNCA-208ENST00000505199 BCAR3O75815 825 aa15.77■□□□□ 0.12
SNCA-208ENST00000505199 TRIM27P14373 513 aa15.77■□□□□ 0.12
SNCA-208ENST00000505199 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
SNCA-208ENST00000505199 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
SNCA-208ENST00000505199 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.77■□□□□ 0.12
SNCA-208ENST00000505199 PLA2G12BQ9BX93 195 aa15.77■□□□□ 0.12
SNCA-208ENST00000505199 GRM8O00222 908 aa15.76■□□□□ 0.11
SNCA-208ENST00000505199 SRGNP10124 158 aa15.76■□□□□ 0.11
SNCA-208ENST00000505199 NPR1P16066 1061 aa15.76■□□□□ 0.11
SNCA-208ENST00000505199 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
SNCA-208ENST00000505199 CWF19L2Q2TBE0 894 aaKnown RBP15.76■□□□□ 0.11
SNCA-208ENST00000505199 ERFEQ4G0M1 354 aa15.76■□□□□ 0.11
SNCA-208ENST00000505199 STYK1Q6J9G0 422 aa15.76■□□□□ 0.11
SNCA-208ENST00000505199 MASTLQ96GX5 879 aa15.76■□□□□ 0.11
SNCA-208ENST00000505199 ABCC12Q96J65 1359 aa15.75■□□□□ 0.11
SNCA-208ENST00000505199 DDX60Q8IY21 1712 aaKnown RBP15.75■□□□□ 0.11
SNCA-208ENST00000505199 ALDH1B1P30837 517 aa15.75■□□□□ 0.11
SNCA-208ENST00000505199 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
SNCA-208ENST00000505199 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
SNCA-208ENST00000505199 PIM2Q9P1W9 311 aa15.75■□□□□ 0.11
SNCA-208ENST00000505199 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
SNCA-208ENST00000505199 MYH3P11055 1940 aa15.74■□□□□ 0.11
SNCA-208ENST00000505199 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
SNCA-208ENST00000505199 PDE8AO60658 829 aa15.74■□□□□ 0.11
SNCA-208ENST00000505199 KCNA3P22001 575 aa15.74■□□□□ 0.11
SNCA-208ENST00000505199 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
SNCA-208ENST00000505199 SLC4A10Q6U841 1118 aa15.74■□□□□ 0.11
SNCA-208ENST00000505199 FAM89AQ96GI7 184 aa15.74■□□□□ 0.11
SNCA-208ENST00000505199 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
SNCA-208ENST00000505199 CASP7P55210 303 aa15.73■□□□□ 0.11
SNCA-208ENST00000505199 PDE3AQ14432 1141 aa15.73■□□□□ 0.11
SNCA-208ENST00000505199 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
SNCA-208ENST00000505199 C2CD5Q86YS7 1000 aa15.73■□□□□ 0.11
SNCA-208ENST00000505199 FRAT1Q92837 279 aaPredicted RBP15.73■□□□□ 0.11
SNCA-208ENST00000505199 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
SNCA-208ENST00000505199 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
SNCA-208ENST00000505199 TNRC6CQ9HCJ0 1690 aaKnown RBP15.73■□□□□ 0.11
SNCA-208ENST00000505199 ARFGEF1Q9Y6D6 1849 aa15.73■□□□□ 0.11
SNCA-208ENST00000505199 COL11A2P13942 1736 aaPredicted RBP15.72■□□□□ 0.11
SNCA-208ENST00000505199 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 DPEP1P16444 411 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 SOGA3Q5TF21 947 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
SNCA-208ENST00000505199 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
SNCA-208ENST00000505199 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 TTLL6Q8N841 843 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 NLGN2Q8NFZ4 835 aa15.72■□□□□ 0.11
SNCA-208ENST00000505199 RPGRQ92834 1020 aaKnown RBP15.72■□□□□ 0.11
SNCA-208ENST00000505199 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
SNCA-208ENST00000505199 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
SNCA-208ENST00000505199 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
SNCA-208ENST00000505199 CC2D2BQ6DHV5 1058 aa15.71■□□□□ 0.11
SNCA-208ENST00000505199 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
SNCA-208ENST00000505199 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SNCA-208ENST00000505199 A0A0G2JLW4 131 aa15.7■□□□□ 0.1
SNCA-208ENST00000505199 GRIN3BO60391 1043 aa15.7■□□□□ 0.1
SNCA-208ENST00000505199 GNAI3P08754 354 aa15.7■□□□□ 0.1
SNCA-208ENST00000505199 BBOX1O75936 387 aa15.69■□□□□ 0.1
SNCA-208ENST00000505199 CSF1RP07333 972 aa15.69■□□□□ 0.1
SNCA-208ENST00000505199 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
SNCA-208ENST00000505199 CTSWP56202 376 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms