RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CSF1RP07333 972 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 KCNA3P22001 575 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 ECM29Q5VYK3 1845 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 PI4KAP2A4QPH2 592 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 RLBP1P12271 317 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 EIF2S2P20042 333 aaKnown RBP10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 KIF6Q6ZMV9 814 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 PI4KAP1Q8N8J0 262 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 GCKRQ14397 625 aa10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 ZBTB38Q8NAP3 1195 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE2-208ENST00000505065 DDX58O95786 925 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 MYL6BP14649 208 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 RRP1P56182 461 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 SUSD4Q5VX71 490 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 ZNF609O15014 1411 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 RFC4P35249 363 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 R3HDM1Q15032 1099 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 FOXO4P98177 505 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 PRR5LQ6MZQ0 368 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 SMC4Q9NTJ3 1288 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 LAMB1P07942 1786 aa10.58□□□□□ -0.72
CDC42SE2-208ENST00000505065 USP44Q9H0E7 712 aa10.57□□□□□ -0.72
CDC42SE2-208ENST00000505065 CD2APQ9Y5K6 639 aa10.57□□□□□ -0.72
CDC42SE2-208ENST00000505065 IRS2Q9Y4H2 1338 aa10.57□□□□□ -0.72
CDC42SE2-208ENST00000505065 ZKSCAN2Q63HK3 967 aa10.57□□□□□ -0.72
CDC42SE2-208ENST00000505065 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
CDC42SE2-208ENST00000505065 TNNQ9UQP3 1299 aa10.57□□□□□ -0.72
CDC42SE2-208ENST00000505065 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 AAMPQ13685 434 aa10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 NYXQ9GZU5 481 aa10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 ADAMTSL1Q8N6G6 1762 aa10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 ANKRD44Q8N8A2 993 aa10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 IPO8O15397 1037 aaKnown RBP10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 ZPR1O75312 459 aa10.56□□□□□ -0.72
CDC42SE2-208ENST00000505065 C7orf43Q8WVR3 580 aa10.55□□□□□ -0.72
CDC42SE2-208ENST00000505065 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
CDC42SE2-208ENST00000505065 ZBTB40Q9NUA8 1239 aa10.55□□□□□ -0.72
CDC42SE2-208ENST00000505065 RFX5P48382 616 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-208ENST00000505065 TGFB2P61812 414 aa10.55□□□□□ -0.72
CDC42SE2-208ENST00000505065 CWC25Q9NXE8 425 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-208ENST00000505065 MVPQ14764 893 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 MYH7P12883 1935 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 COL4A5P29400 1685 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 SERPINB2P05120 415 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 POLA2Q14181 598 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 NECTIN2Q92692 538 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 ZBTB3Q9H5J0 574 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 STYK1Q6J9G0 422 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 PHF14O94880 888 aa10.54□□□□□ -0.72
CDC42SE2-208ENST00000505065 WDR90Q96KV7 1748 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 F6X3S4 739 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 GRM8O00222 908 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 MMP10P09238 476 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 MS4A1P11836 297 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 PPP1R42Q7Z4L9 355 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 DZIP1LQ8IYY4 767 aaKnown RBP10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 TMEM57Q8N5G2 664 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 UTP14AQ9BVJ6 771 aaKnown RBP10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 MYD88Q99836 296 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 FKBP5Q13451 457 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE2-208ENST00000505065 CWF19L2Q2TBE0 894 aaKnown RBP10.52□□□□□ -0.72
CDC42SE2-208ENST00000505065 C20orf194Q5TEA3 1177 aa10.52□□□□□ -0.72
CDC42SE2-208ENST00000505065 SRCIN1Q9C0H9 1055 aa10.52□□□□□ -0.72
CDC42SE2-208ENST00000505065 NIP7Q9Y221 180 aaKnown RBP eCLIP10.52□□□□□ -0.72
CDC42SE2-208ENST00000505065 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 CRAMP1Q96RY5 1269 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 SETDB2Q96T68 719 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 SCN9AQ15858 1988 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 SRGNP10124 158 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 RIC3Q7Z5B4 369 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 SPON1Q9HCB6 807 aa10.52□□□□□ -0.73
CDC42SE2-208ENST00000505065 PAPPA2Q9BXP8 1791 aa10.51□□□□□ -0.73
CDC42SE2-208ENST00000505065 DDX60LQ5H9U9 1706 aaKnown RBP10.51□□□□□ -0.73
CDC42SE2-208ENST00000505065 BCL2L13Q9BXK5 485 aa10.51□□□□□ -0.73
CDC42SE2-208ENST00000505065 LTBP3Q9NS15 1303 aa10.51□□□□□ -0.73
CDC42SE2-208ENST00000505065 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
CDC42SE2-208ENST00000505065 EPHA10Q5JZY3 1008 aa10.51□□□□□ -0.73
CDC42SE2-208ENST00000505065 PSDA5PKW4 1024 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 PDE8AO60658 829 aa10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 TTLL11Q8NHH1 800 aa10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 SUCLG2Q96I99 432 aa10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 CTSWP56202 376 aa10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 AIMP1Q12904 312 aaKnown RBP10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 MYO5AQ9Y4I1 1855 aaKnown RBP10.5□□□□□ -0.73
CDC42SE2-208ENST00000505065 TPTE2Q6XPS3 522 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 PARP3Q9Y6F1 533 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms