RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 ZNF622Q969S3 477 aaKnown RBP eCLIP26.48■■□□□ 1.83
DDR1-255ENST00000504927 CDCA7LQ96GN5 454 aa26.48■■□□□ 1.83
DDR1-255ENST00000504927 MASTLQ96GX5 879 aa26.48■■□□□ 1.83
DDR1-255ENST00000504927 SLC10A5Q5PT55 438 aa26.47■■□□□ 1.83
DDR1-255ENST00000504927 CNKSR1Q969H4 720 aa26.47■■□□□ 1.83
DDR1-255ENST00000504927 DLEC1Q9Y238 1755 aa26.47■■□□□ 1.83
DDR1-255ENST00000504927 COL11A2P13942 1736 aaPredicted RBP26.47■■□□□ 1.83
DDR1-255ENST00000504927 ZNF428Q96B54 188 aa26.46■■□□□ 1.83
DDR1-255ENST00000504927 METTL22Q9BUU2 404 aaPredicted RBP26.46■■□□□ 1.83
DDR1-255ENST00000504927 TRMT112Q9UI30 125 aaKnown RBP26.46■■□□□ 1.83
DDR1-255ENST00000504927 NPR1P16066 1061 aa26.45■■□□□ 1.82
DDR1-255ENST00000504927 ARFGEF1Q9Y6D6 1849 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 PI4KAP2A4QPH2 592 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 ATP5J2-PTCD1G3V325 749 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 HNRNPUQ00839 825 aaKnown RBP eCLIP26.44■■□□□ 1.82
DDR1-255ENST00000504927 FLIIQ13045 1269 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 G2E3Q7L622 706 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 PI4KAP1Q8N8J0 262 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 MAP3K2Q9Y2U5 619 aa26.44■■□□□ 1.82
DDR1-255ENST00000504927 SH3TC1Q8TE82 1336 aa26.43■■□□□ 1.82
DDR1-255ENST00000504927 RIC1Q4ADV7 1423 aa26.43■■□□□ 1.82
DDR1-255ENST00000504927 NLRP3Q96P20 1036 aa26.43■■□□□ 1.82
DDR1-255ENST00000504927 MYD88Q99836 296 aa26.43■■□□□ 1.82
DDR1-255ENST00000504927 CT47B1P0C2W7 299 aaPredicted RBP26.42■■□□□ 1.82
DDR1-255ENST00000504927 NEXNQ0ZGT2 675 aa26.42■■□□□ 1.82
DDR1-255ENST00000504927 CRY2Q49AN0 593 aa26.42■■□□□ 1.82
DDR1-255ENST00000504927 ARHGAP27Q6ZUM4 889 aa26.42■■□□□ 1.82
DDR1-255ENST00000504927 CCDC191Q8NCU4 936 aa26.42■■□□□ 1.82
DDR1-255ENST00000504927 ALDH1B1P30837 517 aa26.41■■□□□ 1.82
DDR1-255ENST00000504927 FKBP5Q13451 457 aaPredicted RBP26.41■■□□□ 1.82
DDR1-255ENST00000504927 ABCC12Q96J65 1359 aa26.4■■□□□ 1.82
DDR1-255ENST00000504927 ZNF784Q8NCA9 323 aaPredicted RBP26.39■■□□□ 1.82
DDR1-255ENST00000504927 ADCY9O60503 1353 aa26.38■■□□□ 1.81
DDR1-255ENST00000504927 HSP90B1P14625 803 aaKnown RBP26.38■■□□□ 1.81
DDR1-255ENST00000504927 HOXA10P31260 410 aaPredicted RBP26.38■■□□□ 1.81
DDR1-255ENST00000504927 ZBTB38Q8NAP3 1195 aaPredicted RBP26.38■■□□□ 1.81
DDR1-255ENST00000504927 RPGRQ92834 1020 aaKnown RBP26.38■■□□□ 1.81
DDR1-255ENST00000504927 CWC25Q9NXE8 425 aaPredicted RBP26.38■■□□□ 1.81
DDR1-255ENST00000504927 DNAAF4Q8WXU2 420 aa26.37■■□□□ 1.81
DDR1-255ENST00000504927 CACNA1FO60840 1977 aa26.37■■□□□ 1.81
DDR1-255ENST00000504927 ANKRD36CQ5JPF3 1778 aa26.36■■□□□ 1.81
DDR1-255ENST00000504927 TNRC6CQ9HCJ0 1690 aaKnown RBP26.36■■□□□ 1.81
DDR1-255ENST00000504927 ALDH1L2Q3SY69 923 aa26.36■■□□□ 1.81
DDR1-255ENST00000504927 SOGA3Q5TF21 947 aa26.36■■□□□ 1.81
DDR1-255ENST00000504927 PRPF40BQ6NWY9 871 aaKnown RBP26.36■■□□□ 1.81
DDR1-255ENST00000504927 FAM89AQ96GI7 184 aa26.36■■□□□ 1.81
DDR1-255ENST00000504927 RBM17Q96I25 401 aaKnown RBP26.36■■□□□ 1.81
DDR1-255ENST00000504927 HCLS1P14317 486 aaPredicted RBP26.35■■□□□ 1.81
DDR1-255ENST00000504927 SYNE4Q8N205 404 aa26.35■■□□□ 1.81
DDR1-255ENST00000504927 CRAMP1Q96RY5 1269 aa26.35■■□□□ 1.81
DDR1-255ENST00000504927 ARFGEF2Q9Y6D5 1785 aa26.34■■□□□ 1.81
DDR1-255ENST00000504927 PCCAP05165 728 aaPredicted RBP26.34■■□□□ 1.81
DDR1-255ENST00000504927 IGKV5-2P06315 115 aa26.34■■□□□ 1.81
DDR1-255ENST00000504927 C21orf2O43822 256 aa26.33■■□□□ 1.81
DDR1-255ENST00000504927 MRPL50Q8N5N7 158 aaKnown RBP26.33■■□□□ 1.81
DDR1-255ENST00000504927 IRS4O14654 1257 aaPredicted RBP26.32■■□□□ 1.8
DDR1-255ENST00000504927 C3orf67Q6ZVT6 689 aa26.32■■□□□ 1.8
DDR1-255ENST00000504927 LINS1Q8NG48 757 aa26.32■■□□□ 1.8
DDR1-255ENST00000504927 SSH1Q8WYL5 1049 aa26.32■■□□□ 1.8
DDR1-255ENST00000504927 NEURL1BA8MQ27 555 aa26.31■■□□□ 1.8
DDR1-255ENST00000504927 C7orf43Q8WVR3 580 aa26.31■■□□□ 1.8
DDR1-255ENST00000504927 CACNA1SQ13698 1873 aa26.31■■□□□ 1.8
DDR1-255ENST00000504927 ZBED9Q6R2W3 1325 aa26.31■■□□□ 1.8
DDR1-255ENST00000504927 SF3B3Q15393 1217 aaKnown RBP26.3■■□□□ 1.8
DDR1-255ENST00000504927 RTL5Q5HYW3 569 aaPredicted RBP26.3■■□□□ 1.8
DDR1-255ENST00000504927 ZNF219Q9P2Y4 722 aaPredicted RBP26.3■■□□□ 1.8
DDR1-255ENST00000504927 CWF19L2Q2TBE0 894 aaKnown RBP26.29■■□□□ 1.8
DDR1-255ENST00000504927 DDX46Q7L014 1031 aaKnown RBP26.29■■□□□ 1.8
DDR1-255ENST00000504927 PTPRCP08575 1304 aa26.29■■□□□ 1.8
DDR1-255ENST00000504927 SLX4Q8IY92 1834 aa26.28■■□□□ 1.8
DDR1-255ENST00000504927 GCKRQ14397 625 aa26.28■■□□□ 1.8
DDR1-255ENST00000504927 CC2D2BQ6DHV5 1058 aa26.28■■□□□ 1.8
DDR1-255ENST00000504927 F6X3S4 739 aa26.27■■□□□ 1.8
DDR1-255ENST00000504927 BBOX1O75936 387 aa26.27■■□□□ 1.8
DDR1-255ENST00000504927 GRIPAP1Q4V328 841 aa26.27■■□□□ 1.8
DDR1-255ENST00000504927 SMC4Q9NTJ3 1288 aa26.27■■□□□ 1.8
DDR1-255ENST00000504927 CDHR2Q9BYE9 1310 aa26.27■■□□□ 1.8
DDR1-255ENST00000504927 H7C1W4 665 aa26.26■■□□□ 1.79
DDR1-255ENST00000504927 PDE8AO60658 829 aa26.26■■□□□ 1.79
DDR1-255ENST00000504927 BRPF1P55201 1214 aaPredicted RBP26.26■■□□□ 1.79
DDR1-255ENST00000504927 CCDC93Q567U6 631 aa26.26■■□□□ 1.79
DDR1-255ENST00000504927 BEND3Q5T5X7 828 aa26.26■■□□□ 1.79
DDR1-255ENST00000504927 RTKN2Q8IZC4 609 aa26.26■■□□□ 1.79
DDR1-255ENST00000504927 TMX4Q9H1E5 349 aaPredicted RBP26.26■■□□□ 1.79
DDR1-255ENST00000504927 RASSF7Q02833 373 aa26.25■■□□□ 1.79
DDR1-255ENST00000504927 SBF1O95248 1867 aa26.24■■□□□ 1.79
DDR1-255ENST00000504927 LMNB1P20700 586 aa26.24■■□□□ 1.79
DDR1-255ENST00000504927 C9orf131Q5VYM1 1079 aa26.24■■□□□ 1.79
DDR1-255ENST00000504927 LTBP3Q9NS15 1303 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 NFKBIEO00221 500 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 ALDH1L1O75891 902 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 PRELPP51888 382 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 RARSP54136 660 aaKnown RBP26.23■■□□□ 1.79
DDR1-255ENST00000504927 SLC4A10Q6U841 1118 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 BCL2L13Q9BXK5 485 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 TAOK3Q9H2K8 898 aa26.23■■□□□ 1.79
DDR1-255ENST00000504927 ABCC4O15439 1325 aa26.22■■□□□ 1.79
DDR1-255ENST00000504927 PPEF1O14829 653 aaPredicted RBP26.22■■□□□ 1.79
DDR1-255ENST00000504927 GRAPQ13588 217 aa26.22■■□□□ 1.79
DDR1-255ENST00000504927 CCDC152Q4G0S7 254 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms