RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 SALL3Q9BXA9 1300 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 HIP1O00291 1037 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 CYP27B1O15528 508 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 PTH1RQ03431 593 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
CSF1R-203ENST00000504875 RBM8AQ9Y5S9 174 aaKnown RBP11.65□□□□□ -0.54
CSF1R-203ENST00000504875 FSD2A1L4K1 749 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 ZSCAN23Q3MJ62 389 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
CSF1R-203ENST00000504875 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
CSF1R-203ENST00000504875 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 GOLGA6L4A6NEF3 574 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 A1BGP04217 495 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 FOSBP53539 338 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 TFCP2Q12800 502 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 SASH1O94885 1247 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 MBD3O95983 291 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
CSF1R-203ENST00000504875 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
CSF1R-203ENST00000504875 PSMA5P28066 241 aa11.63□□□□□ -0.55
CSF1R-203ENST00000504875 EPHA10Q5JZY3 1008 aa11.63□□□□□ -0.55
CSF1R-203ENST00000504875 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
CSF1R-203ENST00000504875 LSG1Q9H089 658 aaKnown RBP11.63□□□□□ -0.55
CSF1R-203ENST00000504875 ATP6V1DQ9Y5K8 247 aa11.63□□□□□ -0.55
CSF1R-203ENST00000504875 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
CSF1R-203ENST00000504875 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
CSF1R-203ENST00000504875 ZDHHC9Q9Y397 364 aa11.62□□□□□ -0.55
CSF1R-203ENST00000504875 CCDC171Q6TFL3 1326 aa11.62□□□□□ -0.55
CSF1R-203ENST00000504875 NFAT5O94916 1531 aa11.62□□□□□ -0.55
CSF1R-203ENST00000504875 GJB2P29033 226 aa11.62□□□□□ -0.55
CSF1R-203ENST00000504875 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
CSF1R-203ENST00000504875 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 INTS4Q96HW7 963 aaKnown RBP11.61□□□□□ -0.55
CSF1R-203ENST00000504875 DBNDD2Q9BQY9 259 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
CSF1R-203ENST00000504875 TMOD3Q9NYL9 352 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 FAM177BA6PVY3 158 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 STX6O43752 255 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSF1R-203ENST00000504875 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
CSF1R-203ENST00000504875 CREB3L3Q68CJ9 461 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 CHD2O14647 1828 aaKnown RBP11.61□□□□□ -0.55
CSF1R-203ENST00000504875 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 GOLIM4O00461 696 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 MTX1Q13505 466 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 PDIA6Q15084 440 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 CNPY2Q9Y2B0 182 aa11.61□□□□□ -0.55
CSF1R-203ENST00000504875 BRD1O95696 1058 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 MPNDQ8N594 471 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 IL2RBP14784 551 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 TIMM10P62072 90 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 WASHC4Q2M389 1173 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 GPT2Q8TD30 523 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
CSF1R-203ENST00000504875 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
CSF1R-203ENST00000504875 PHF14O94880 888 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 GPTP24298 496 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 CCDC173Q0VFZ6 552 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 USP48Q86UV5 1035 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 H3BQV1 296 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 KIF6Q6ZMV9 814 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 FAM184AQ8NB25 1140 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 ZSCAN31Q96LW9 406 aaPredicted RBP11.59□□□□□ -0.55
CSF1R-203ENST00000504875 LRRC2Q9BYS8 371 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 SNRKQ9NRH2 765 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSF1R-203ENST00000504875 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
CSF1R-203ENST00000504875 SPATA31A3Q5VYP0 1347 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 PCDH11XQ9BZA7 1347 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 PCDH11YQ9BZA8 1340 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 SYT1P21579 422 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 CUL4AQ13619 759 aa11.59□□□□□ -0.55
CSF1R-203ENST00000504875 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
CSF1R-203ENST00000504875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.55
CSF1R-203ENST00000504875 PPFIA3O75145 1194 aa11.58□□□□□ -0.55
CSF1R-203ENST00000504875 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.55
CSF1R-203ENST00000504875 SLAIN2Q9P270 581 aa11.58□□□□□ -0.55
CSF1R-203ENST00000504875 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.55
CSF1R-203ENST00000504875 FAM208AQ9UK61 1670 aaKnown RBP11.58□□□□□ -0.56
CSF1R-203ENST00000504875 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
CSF1R-203ENST00000504875 GADD45BO75293 160 aaPredicted RBP11.58□□□□□ -0.56
CSF1R-203ENST00000504875 LARGE1O95461 756 aa11.58□□□□□ -0.56
CSF1R-203ENST00000504875 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
CSF1R-203ENST00000504875 BRINP3Q76B58 766 aa11.58□□□□□ -0.56
CSF1R-203ENST00000504875 DDX11Q96FC9 970 aa11.58□□□□□ -0.56
CSF1R-203ENST00000504875 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
CSF1R-203ENST00000504875 CSPP1Q1MSJ5 1256 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms