RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 ALDH1B1P30837 517 aa32.88■■■□□ 2.85
PVT1-201ENST00000504719 TAOK3Q9H2K8 898 aa32.87■■■□□ 2.85
PVT1-201ENST00000504719 TCIRG1Q13488 830 aa32.86■■■□□ 2.85
PVT1-201ENST00000504719 UTP14AQ9BVJ6 771 aaKnown RBP32.86■■■□□ 2.85
PVT1-201ENST00000504719 HYPKQ9NX55 129 aa32.85■■■□□ 2.85
PVT1-201ENST00000504719 ELL2O00472 640 aaPredicted RBP32.84■■■□□ 2.85
PVT1-201ENST00000504719 NCBP3Q53F19 620 aaKnown RBP32.84■■■□□ 2.85
PVT1-201ENST00000504719 CCDC93Q567U6 631 aa32.84■■■□□ 2.85
PVT1-201ENST00000504719 NLRP10Q86W26 655 aa32.84■■■□□ 2.85
PVT1-201ENST00000504719 WWC1Q8IX03 1113 aa32.84■■■□□ 2.85
PVT1-201ENST00000504719 PLBD2Q8NHP8 589 aa32.84■■■□□ 2.85
PVT1-201ENST00000504719 HOXA10P31260 410 aaPredicted RBP32.83■■■□□ 2.85
PVT1-201ENST00000504719 ANKRD13DQ6ZTN6 518 aa32.83■■■□□ 2.85
PVT1-201ENST00000504719 FAM9BQ8IZU0 186 aa32.83■■■□□ 2.85
PVT1-201ENST00000504719 C8orf58Q8NAV2 365 aa32.83■■■□□ 2.85
PVT1-201ENST00000504719 RNF123Q5XPI4 1314 aa32.82■■■□□ 2.84
PVT1-201ENST00000504719 SLC10A5Q5PT55 438 aa32.82■■■□□ 2.84
PVT1-201ENST00000504719 RPGRQ92834 1020 aaKnown RBP32.82■■■□□ 2.84
PVT1-201ENST00000504719 GLTPD2A6NH11 291 aa32.81■■■□□ 2.84
PVT1-201ENST00000504719 DIEXFQ68CQ4 756 aaKnown RBP32.81■■■□□ 2.84
PVT1-201ENST00000504719 RRAGCQ9HB90 399 aa32.81■■■□□ 2.84
PVT1-201ENST00000504719 TOMM70O94826 608 aa32.8■■■□□ 2.84
PVT1-201ENST00000504719 OLFM4Q6UX06 510 aa32.8■■■□□ 2.84
PVT1-201ENST00000504719 C3orf67Q6ZVT6 689 aa32.8■■■□□ 2.84
PVT1-201ENST00000504719 NLRP3Q96P20 1036 aa32.8■■■□□ 2.84
PVT1-201ENST00000504719 RTKN2Q8IZC4 609 aa32.78■■■□□ 2.84
PVT1-201ENST00000504719 RBM17Q96I25 401 aaKnown RBP32.78■■■□□ 2.84
PVT1-201ENST00000504719 CRAMP1Q96RY5 1269 aa32.78■■■□□ 2.84
PVT1-201ENST00000504719 LAMB2P55268 1798 aa32.78■■■□□ 2.84
PVT1-201ENST00000504719 FKBP4Q02790 459 aaKnown RBP eCLIP32.77■■■□□ 2.84
PVT1-201ENST00000504719 TSR2Q969E8 191 aaKnown RBP32.77■■■□□ 2.84
PVT1-201ENST00000504719 TSPYL6Q8N831 410 aa32.76■■■□□ 2.83
PVT1-201ENST00000504719 ISCA1Q9BUE6 129 aa32.76■■■□□ 2.83
PVT1-201ENST00000504719 TRMT112Q9UI30 125 aaKnown RBP32.76■■■□□ 2.83
PVT1-201ENST00000504719 IL16Q14005 1332 aa32.76■■■□□ 2.83
PVT1-201ENST00000504719 CHMP4AQ9BY43 222 aa32.75■■■□□ 2.83
PVT1-201ENST00000504719 PHAXQ9H814 394 aaKnown RBP32.75■■■□□ 2.83
PVT1-201ENST00000504719 C16orf71Q8IYS4 520 aaPredicted RBP32.74■■■□□ 2.83
PVT1-201ENST00000504719 SYNE4Q8N205 404 aa32.74■■■□□ 2.83
PVT1-201ENST00000504719 SNED1Q8TER0 1413 aa32.74■■■□□ 2.83
PVT1-201ENST00000504719 SH3TC1Q8TE82 1336 aa32.74■■■□□ 2.83
PVT1-201ENST00000504719 HSPA6P17066 643 aa32.73■■■□□ 2.83
PVT1-201ENST00000504719 CCDC30Q5VVM6 783 aa32.73■■■□□ 2.83
PVT1-201ENST00000504719 DPY19L2Q6NUT2 758 aa32.73■■■□□ 2.83
PVT1-201ENST00000504719 HCLS1P14317 486 aaPredicted RBP32.72■■■□□ 2.83
PVT1-201ENST00000504719 CC2D2BQ6DHV5 1058 aa32.72■■■□□ 2.83
PVT1-201ENST00000504719 RBM46Q8TBY0 533 aaKnown RBP32.72■■■□□ 2.83
PVT1-201ENST00000504719 WDR90Q96KV7 1748 aa32.71■■■□□ 2.83
PVT1-201ENST00000504719 ATP5J2-PTCD1G3V325 749 aa32.71■■■□□ 2.83
PVT1-201ENST00000504719 CCER2I3L3R5 266 aa32.71■■■□□ 2.83
PVT1-201ENST00000504719 GOLGA2Q08379 1002 aa32.71■■■□□ 2.83
PVT1-201ENST00000504719 ZNF277Q9NRM2 450 aaPredicted RBP32.71■■■□□ 2.83
PVT1-201ENST00000504719 RIC3Q7Z5B4 369 aa32.7■■■□□ 2.83
PVT1-201ENST00000504719 SALL2Q9Y467 1007 aaPredicted RBP32.7■■■□□ 2.83
PVT1-201ENST00000504719 DDX60Q8IY21 1712 aaKnown RBP32.7■■■□□ 2.83
PVT1-201ENST00000504719 PPEF1O14829 653 aaPredicted RBP32.69■■■□□ 2.82
PVT1-201ENST00000504719 TRIM28Q13263 835 aaKnown RBP32.69■■■□□ 2.82
PVT1-201ENST00000504719 ZNF428Q96B54 188 aa32.69■■■□□ 2.82
PVT1-201ENST00000504719 PSMD1Q99460 953 aa32.69■■■□□ 2.82
PVT1-201ENST00000504719 VEGFAP15692 232 aaPredicted RBP32.68■■■□□ 2.82
PVT1-201ENST00000504719 WDR63Q8IWG1 891 aa32.68■■■□□ 2.82
PVT1-201ENST00000504719 GRIPAP1Q4V328 841 aa32.67■■■□□ 2.82
PVT1-201ENST00000504719 ABCC4O15439 1325 aa32.67■■■□□ 2.82
PVT1-201ENST00000504719 POTECB2RU33 542 aa32.66■■■□□ 2.82
PVT1-201ENST00000504719 IARSP41252 1262 aaKnown RBP32.66■■■□□ 2.82
PVT1-201ENST00000504719 TWISTNBQ3B726 338 aaPredicted RBP32.66■■■□□ 2.82
PVT1-201ENST00000504719 SLC51AQ86UW1 340 aa32.65■■■□□ 2.82
PVT1-201ENST00000504719 FAM89AQ96GI7 184 aa32.65■■■□□ 2.82
PVT1-201ENST00000504719 TCERG1O14776 1098 aaKnown RBP32.64■■■□□ 2.82
PVT1-201ENST00000504719 TAF1P21675 1872 aa32.64■■■□□ 2.82
PVT1-201ENST00000504719 FANCIQ9NVI1 1328 aa32.63■■■□□ 2.81
PVT1-201ENST00000504719 DDNO94850 711 aaPredicted RBP32.63■■■□□ 2.81
PVT1-201ENST00000504719 MIER1Q8N108 512 aa32.63■■■□□ 2.81
PVT1-201ENST00000504719 DDX58O95786 925 aaKnown RBP32.62■■■□□ 2.81
PVT1-201ENST00000504719 FSTL1Q12841 308 aa32.62■■■□□ 2.81
PVT1-201ENST00000504719 DDX46Q7L014 1031 aaKnown RBP32.62■■■□□ 2.81
PVT1-201ENST00000504719 MYD88Q99836 296 aa32.62■■■□□ 2.81
PVT1-201ENST00000504719 ATP6V0A2Q9Y487 856 aa32.62■■■□□ 2.81
PVT1-201ENST00000504719 BBOX1O75936 387 aa32.61■■■□□ 2.81
PVT1-201ENST00000504719 STK31Q9BXU1 1019 aa32.61■■■□□ 2.81
PVT1-201ENST00000504719 METTL22Q9BUU2 404 aaPredicted RBP32.6■■■□□ 2.81
PVT1-201ENST00000504719 CACNA1FO60840 1977 aa32.59■■■□□ 2.81
PVT1-201ENST00000504719 GRAPQ13588 217 aa32.59■■■□□ 2.81
PVT1-201ENST00000504719 GRAPLQ8TC17 118 aaPredicted RBP32.59■■■□□ 2.81
PVT1-201ENST00000504719 TMX4Q9H1E5 349 aaPredicted RBP32.59■■■□□ 2.81
PVT1-201ENST00000504719 FZD9O00144 591 aa32.58■■■□□ 2.81
PVT1-201ENST00000504719 SF3B3Q15393 1217 aaKnown RBP32.58■■■□□ 2.81
PVT1-201ENST00000504719 RTL5Q5HYW3 569 aaPredicted RBP32.58■■■□□ 2.81
PVT1-201ENST00000504719 SP8Q8IXZ3 490 aa32.58■■■□□ 2.81
PVT1-201ENST00000504719 ZBTB38Q8NAP3 1195 aaPredicted RBP32.58■■■□□ 2.81
PVT1-201ENST00000504719 CCDC191Q8NCU4 936 aa32.58■■■□□ 2.81
PVT1-201ENST00000504719 ZNF541Q9H0D2 1346 aa32.57■■■□□ 2.8
PVT1-201ENST00000504719 IRS4O14654 1257 aaPredicted RBP32.57■■■□□ 2.8
PVT1-201ENST00000504719 KSR2Q6VAB6 950 aa32.57■■■□□ 2.8
PVT1-201ENST00000504719 SMC1BQ8NDV3 1235 aa32.57■■■□□ 2.8
PVT1-201ENST00000504719 MAP3K2Q9Y2U5 619 aa32.57■■■□□ 2.8
PVT1-201ENST00000504719 APLP1P51693 650 aa32.56■■■□□ 2.8
PVT1-201ENST00000504719 SPINK5Q9NQ38 1064 aaPredicted RBP32.56■■■□□ 2.8
PVT1-201ENST00000504719 COL4A5P29400 1685 aa32.56■■■□□ 2.8
PVT1-201ENST00000504719 SCN4AP35499 1836 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms