RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
ITGA3-203ENST00000504417 NFKBIEO00221 500 aa9.33□□□□□ -0.92
ITGA3-203ENST00000504417 CRY2Q49AN0 593 aa9.33□□□□□ -0.92
ITGA3-203ENST00000504417 DALRD3Q5D0E6 543 aaKnown RBP9.33□□□□□ -0.92
ITGA3-203ENST00000504417 C2CD5Q86YS7 1000 aa9.33□□□□□ -0.92
ITGA3-203ENST00000504417 C7orf43Q8WVR3 580 aa9.33□□□□□ -0.92
ITGA3-203ENST00000504417 DDX21Q9NR30 783 aaKnown RBP eCLIP9.33□□□□□ -0.92
ITGA3-203ENST00000504417 PDZRN3Q9UPQ7 1066 aa9.33□□□□□ -0.92
ITGA3-203ENST00000504417 NIP7Q9Y221 180 aaKnown RBP eCLIP9.33□□□□□ -0.92
ITGA3-203ENST00000504417 ZNF652Q9Y2D9 606 aa9.33□□□□□ -0.92
ITGA3-203ENST00000504417 LTBP3Q9NS15 1303 aa9.32□□□□□ -0.92
ITGA3-203ENST00000504417 SCN9AQ15858 1988 aa9.32□□□□□ -0.92
ITGA3-203ENST00000504417 MYL6BP14649 208 aa9.32□□□□□ -0.92
ITGA3-203ENST00000504417 RASSF7Q02833 373 aa9.32□□□□□ -0.92
ITGA3-203ENST00000504417 STYK1Q6J9G0 422 aa9.32□□□□□ -0.92
ITGA3-203ENST00000504417 TTLL6Q8N841 843 aa9.32□□□□□ -0.92
ITGA3-203ENST00000504417 IL16Q14005 1332 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 ZNF521Q96K83 1311 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 KIF3CO14782 793 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 PDE6BP35913 854 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 SUSD4Q5VX71 490 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 DUSP27Q5VZP5 1158 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 C3orf67Q6ZVT6 689 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 NBPF5PQ86XG9 351 aaPredicted RBP9.31□□□□□ -0.92
ITGA3-203ENST00000504417 WWC1Q8IX03 1113 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 ZBTB3Q9H5J0 574 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 MRS2Q9HD23 443 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
ITGA3-203ENST00000504417 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
ITGA3-203ENST00000504417 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
ITGA3-203ENST00000504417 H0YIN7 160 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 ANP32CO43423 234 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 EIF2S2P20042 333 aaKnown RBP9.3□□□□□ -0.92
ITGA3-203ENST00000504417 GNAI1P63096 354 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 ST5P78524 1137 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 HDGFL1Q5TGJ6 251 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 PRPF40BQ6NWY9 871 aaKnown RBP9.3□□□□□ -0.92
ITGA3-203ENST00000504417 KIF6Q6ZMV9 814 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 SLC51AQ86UW1 340 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 TSPYL6Q8N831 410 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 C8orf58Q8NAV2 365 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 MASTLQ96GX5 879 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 RNF123Q5XPI4 1314 aa9.3□□□□□ -0.92
ITGA3-203ENST00000504417 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 C9orf131Q5VYM1 1079 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 NUTM1Q86Y26 1132 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 NGEFQ8N5V2 710 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 NECTIN2Q92692 538 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 ISCA1Q9BUE6 129 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 TRPM7Q96QT4 1865 aa9.29□□□□□ -0.92
ITGA3-203ENST00000504417 POLR2AP24928 1970 aaKnown RBP9.28□□□□□ -0.92
ITGA3-203ENST00000504417 NPR1P16066 1061 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 GPTP24298 496 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 HOXA10P31260 410 aaPredicted RBP9.28□□□□□ -0.92
ITGA3-203ENST00000504417 PLCB2Q00722 1185 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
ITGA3-203ENST00000504417 TCIRG1Q13488 830 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 PARP10Q53GL7 1025 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 SLC10A5Q5PT55 438 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 TPTE2Q6XPS3 522 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 TSR2Q969E8 191 aaKnown RBP9.28□□□□□ -0.92
ITGA3-203ENST00000504417 CNKSR1Q969H4 720 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 NYXQ9GZU5 481 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 DBF4Q9UBU7 674 aaPredicted RBP9.28□□□□□ -0.92
ITGA3-203ENST00000504417 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
ITGA3-203ENST00000504417 FANCIQ9NVI1 1328 aa9.28□□□□□ -0.92
ITGA3-203ENST00000504417 C1QTNF8P60827 252 aa9.27□□□□□ -0.93
ITGA3-203ENST00000504417 GSE1Q14687 1217 aa9.27□□□□□ -0.93
ITGA3-203ENST00000504417 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.93
ITGA3-203ENST00000504417 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
ITGA3-203ENST00000504417 ZNF622Q969S3 477 aaKnown RBP eCLIP9.27□□□□□ -0.93
ITGA3-203ENST00000504417 RNF181Q9P0P0 153 aa9.27□□□□□ -0.93
ITGA3-203ENST00000504417 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
ITGA3-203ENST00000504417 C21orf2O43822 256 aa9.26□□□□□ -0.93
ITGA3-203ENST00000504417 LMNB1P20700 586 aa9.26□□□□□ -0.93
ITGA3-203ENST00000504417 TRIM28Q13263 835 aaKnown RBP9.26□□□□□ -0.93
ITGA3-203ENST00000504417 OLFM4Q6UX06 510 aa9.26□□□□□ -0.93
ITGA3-203ENST00000504417 SYNE4Q8N205 404 aa9.26□□□□□ -0.93
ITGA3-203ENST00000504417 PHAXQ9H814 394 aaKnown RBP9.26□□□□□ -0.93
ITGA3-203ENST00000504417 HYPKQ9NX55 129 aa9.26□□□□□ -0.93
ITGA3-203ENST00000504417 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 POTECB2RU33 542 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 HSP90AB3PQ58FF7 597 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 PPP1R42Q7Z4L9 355 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 WDR63Q8IWG1 891 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 CRAMP1Q96RY5 1269 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 UTP14AQ9BVJ6 771 aaKnown RBP9.25□□□□□ -0.93
ITGA3-203ENST00000504417 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
ITGA3-203ENST00000504417 NMRK2Q9NPI5 230 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 ABCC4O15439 1325 aa9.25□□□□□ -0.93
ITGA3-203ENST00000504417 AIMP1Q12904 312 aaKnown RBP9.24□□□□□ -0.93
ITGA3-203ENST00000504417 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
ITGA3-203ENST00000504417 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
ITGA3-203ENST00000504417 TAOK3Q9H2K8 898 aa9.24□□□□□ -0.93
ITGA3-203ENST00000504417 ARAP2Q8WZ64 1704 aa9.23□□□□□ -0.93
ITGA3-203ENST00000504417 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms