RNA–Protein interactions for RNA: ENST00000504350.1

COPG1-202, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-202ENST00000504350 SATB1Q01826 763 aa7.35□□□□□ -1.23
COPG1-202ENST00000504350 CT47A1Q5JQC4 288 aaPredicted RBP7.35□□□□□ -1.23
COPG1-202ENST00000504350 RPAP2Q8IXW5 612 aaPredicted RBP7.35□□□□□ -1.23
COPG1-202ENST00000504350 MNS1Q8NEH6 495 aa7.35□□□□□ -1.23
COPG1-202ENST00000504350 ZNF592Q92610 1267 aa7.35□□□□□ -1.23
COPG1-202ENST00000504350 TRIM5Q9C035 493 aa7.35□□□□□ -1.23
COPG1-202ENST00000504350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.35□□□□□ -1.23
COPG1-202ENST00000504350 ATP7AQ04656 1500 aa7.35□□□□□ -1.23
COPG1-202ENST00000504350 SETD1BQ9UPS6 1966 aaKnown RBP7.35□□□□□ -1.23
COPG1-202ENST00000504350 PNPLA6Q8IY17 1366 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 USP27XA6NNY8 438 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 CCP110O43303 1012 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 HSPA1LP34931 641 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 SNW1Q13573 536 aaKnown RBP7.34□□□□□ -1.23
COPG1-202ENST00000504350 CCDC144BQ3MJ40 725 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 ANO6Q4KMQ2 910 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 ARHGAP29Q52LW3 1261 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 CEP85Q6P2H3 762 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 LEKR1Q6ZMV7 388 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 LUZP1Q86V48 1076 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 LRRC8AQ8IWT6 810 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 CCDC144CPQ8IYA2 1237 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.23
COPG1-202ENST00000504350 CCDC150Q8NCX0 1101 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 BANK1Q8NDB2 785 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 PPM1EQ8WY54 764 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 CHMP4CQ96CF2 233 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 DEF6Q9H4E7 631 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 DNAI1Q9UI46 699 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 LCMT1Q9UIC8 334 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 PALD1Q9ULE6 856 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 RIMS2Q9UQ26 1411 aa7.34□□□□□ -1.23
COPG1-202ENST00000504350 STRCP1A6NGW2 1772 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 NCKAP5LQ9HCH0 1330 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.33□□□□□ -1.24
COPG1-202ENST00000504350 CCDC69A6NI79 296 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 TBC1D8O95759 1140 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 GYS2P54840 703 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 GSCP56915 257 aaPredicted RBP7.33□□□□□ -1.24
COPG1-202ENST00000504350 ST5P78524 1137 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 MMS22LQ6ZRQ5 1243 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 RPAINQ86UA6 219 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 OTUD7AQ8TE49 926 aaPredicted RBP7.33□□□□□ -1.24
COPG1-202ENST00000504350 TTC14Q96N46 770 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 CARD10Q9BWT7 1032 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 OSBPL5Q9H0X9 879 aaPredicted RBP7.33□□□□□ -1.24
COPG1-202ENST00000504350 TMX1Q9H3N1 280 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 ZSCAN16Q9H4T2 348 aaPredicted RBP7.33□□□□□ -1.24
COPG1-202ENST00000504350 NRBP1Q9UHY1 535 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 SMC3Q9UQE7 1217 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 MTMR6Q9Y217 621 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 DIP2CQ9Y2E4 1556 aa7.33□□□□□ -1.24
COPG1-202ENST00000504350 NPHP3Q7Z494 1330 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 MAP2P11137 1827 aaKnown RBP7.32□□□□□ -1.24
COPG1-202ENST00000504350 PXDNLA1KZ92 1463 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 LRRC37A3O60309 1634 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 UBAP1LF5GYI3 381 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 POLR3GO15318 223 aaPredicted RBP7.32□□□□□ -1.24
COPG1-202ENST00000504350 HMMRO75330 724 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 VAMP4O75379 141 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 SKILP12757 684 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 SYT1P21579 422 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 PDE1AP54750 535 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 CORO7P57737 925 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 GNAI1P63096 354 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 KRT85P78386 507 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 ERCC6LQ2NKX8 1250 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 JAKMIP3Q5VZ66 844 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 PACS2Q86VP3 889 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 REXO1L1PQ8IX06 675 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 EFCAB13Q8IY85 973 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 CNPY4Q8N129 248 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPG1-202ENST00000504350 PPP1R13BQ96KQ4 1090 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 CEP89Q96ST8 783 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 TACO1Q9BSH4 297 aaKnown RBP7.32□□□□□ -1.24
COPG1-202ENST00000504350 FAM107BQ9H098 131 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 TNMDQ9H2S6 317 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 CXorf56Q9H5V9 222 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 MED4Q9NPJ6 270 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 IMPACTQ9P2X3 320 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
COPG1-202ENST00000504350 EXOC6BQ9Y2D4 811 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 ARHGEF10O15013 1369 aa7.32□□□□□ -1.24
COPG1-202ENST00000504350 EFCAB8A8MWE9 144 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 NRDCO43847 1150 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 CASTP20810 708 aaKnown RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 CHMLP26374 656 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 HSPA4P34932 840 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 SETQ01105 290 aaPredicted RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 SMC1AQ14683 1233 aaKnown RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 ZRSR1Q15695 479 aaKnown RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 STX1AQ16623 288 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 FOXD4L6Q3SYB3 417 aaPredicted RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 CC2D1AQ6P1N0 951 aaPredicted RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 FOXD4L3Q6VB84 417 aaPredicted RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 NOL8Q76FK4 1167 aaKnown RBP7.31□□□□□ -1.24
COPG1-202ENST00000504350 DRC1Q96MC2 740 aa7.31□□□□□ -1.24
COPG1-202ENST00000504350 SH2B1Q9NRF2 756 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms