RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 TMX3Q96JJ7 454 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 UPF3BQ9BZI7 483 aaKnown RBP11□□□□□ -0.65
LINC02239-201ENST00000504339 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
LINC02239-201ENST00000504339 DBNLQ9UJU6 430 aaKnown RBP11□□□□□ -0.65
LINC02239-201ENST00000504339 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
LINC02239-201ENST00000504339 CLEC17AQ6ZS10 378 aa10.99□□□□□ -0.65
LINC02239-201ENST00000504339 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
LINC02239-201ENST00000504339 AHDC1Q5TGY3 1603 aaPredicted RBP10.99□□□□□ -0.65
LINC02239-201ENST00000504339 TJP1Q07157 1748 aa10.99□□□□□ -0.65
LINC02239-201ENST00000504339 ATG9AQ7Z3C6 839 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
LINC02239-201ENST00000504339 FAM227BQ96M60 508 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 ISCA1Q9BUE6 129 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 BOLA2Q9H3K6 86 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 CWC25Q9NXE8 425 aaPredicted RBP10.98□□□□□ -0.65
LINC02239-201ENST00000504339 LTBP4Q8N2S1 1624 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 AFDNP55196 1824 aaKnown RBP10.98□□□□□ -0.65
LINC02239-201ENST00000504339 TRAK2O60296 914 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 COL9A3Q14050 684 aaPredicted RBP10.98□□□□□ -0.65
LINC02239-201ENST00000504339 TNNI3KQ59H18 835 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 FPGT-TNNI3KV9GXZ4 949 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 BCL9O00512 1426 aa10.98□□□□□ -0.65
LINC02239-201ENST00000504339 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
LINC02239-201ENST00000504339 COL14A1Q05707 1796 aaKnown RBP10.97□□□□□ -0.65
LINC02239-201ENST00000504339 CHGBP05060 677 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 CUL4AQ13619 759 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 CCDC191Q8NCU4 936 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 GPATCH3Q96I76 525 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 TTC14Q96N46 770 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 SNRKQ9NRH2 765 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 AK9Q5TCS8 1911 aa10.97□□□□□ -0.65
LINC02239-201ENST00000504339 A0A0D9SFI3 127 aa10.96□□□□□ -0.65
LINC02239-201ENST00000504339 MCCP23508 829 aa10.96□□□□□ -0.65
LINC02239-201ENST00000504339 NMIQ13287 307 aaPredicted RBP10.96□□□□□ -0.65
LINC02239-201ENST00000504339 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
LINC02239-201ENST00000504339 KCNB2Q92953 911 aa10.96□□□□□ -0.65
LINC02239-201ENST00000504339 DBNDD2Q9BQY9 259 aa10.96□□□□□ -0.65
LINC02239-201ENST00000504339 ATP5JP18859 108 aa10.96□□□□□ -0.66
LINC02239-201ENST00000504339 SYNE4Q8N205 404 aa10.96□□□□□ -0.66
LINC02239-201ENST00000504339 CHAMP1Q96JM3 812 aa10.96□□□□□ -0.66
LINC02239-201ENST00000504339 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.66
LINC02239-201ENST00000504339 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 BAG4O95429 457 aaKnown RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 CYP19A1P11511 503 aaPredicted RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 CPA1P15085 419 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 TRIM28Q13263 835 aaKnown RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 NECTIN1Q15223 517 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 HLFQ16534 295 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 ADCK5Q3MIX3 580 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 NOL8Q76FK4 1167 aaKnown RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 ZNF594Q96JF6 807 aaPredicted RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 ITGB4P16144 1822 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 ADAMTS2O95450 1211 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 ZNF589Q86UQ0 364 aaPredicted RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 PUS3Q9BZE2 481 aaKnown RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
LINC02239-201ENST00000504339 TAF6LQ9Y6J9 622 aa10.95□□□□□ -0.66
LINC02239-201ENST00000504339 EXOC5O00471 708 aa10.94□□□□□ -0.66
LINC02239-201ENST00000504339 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
LINC02239-201ENST00000504339 MAP4K1Q92918 833 aa10.94□□□□□ -0.66
LINC02239-201ENST00000504339 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
LINC02239-201ENST00000504339 MED23Q9ULK4 1368 aa10.94□□□□□ -0.66
LINC02239-201ENST00000504339 CCDC171Q6TFL3 1326 aa10.94□□□□□ -0.66
LINC02239-201ENST00000504339 MCM2P49736 904 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 TIMM10P62072 90 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
LINC02239-201ENST00000504339 RUFY3Q7L099 469 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 FAM89AQ96GI7 184 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 GBP4Q96PP9 640 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
LINC02239-201ENST00000504339 TEX13AQ9BXU3 409 aaPredicted RBP10.93□□□□□ -0.66
LINC02239-201ENST00000504339 ZBTB1Q9Y2K1 713 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.93□□□□□ -0.66
LINC02239-201ENST00000504339 SPATA31A1Q5TZJ5 1347 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 STARD3NLO95772 234 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 NUCB2P80303 420 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 KIAA1211Q6ZU35 1233 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 RUFY2Q8WXA3 655 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 CHMP3Q9Y3E7 222 aa10.93□□□□□ -0.66
LINC02239-201ENST00000504339 JCADQ9P266 1359 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 HAUS7Q99871 368 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 FSD1Q9BTV5 496 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 RBM8AQ9Y5S9 174 aaKnown RBP10.92□□□□□ -0.66
LINC02239-201ENST00000504339 LRP6O75581 1613 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 MAP3K15Q6ZN16 1313 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 EYA2O00167 538 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 CSF1RP07333 972 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 AK2P54819 239 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 SLFNL1Q499Z3 407 aa10.92□□□□□ -0.66
LINC02239-201ENST00000504339 GIGYF2Q6Y7W6 1299 aaKnown RBP10.92□□□□□ -0.66
LINC02239-201ENST00000504339 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
LINC02239-201ENST00000504339 LARGE1O95461 756 aa10.91□□□□□ -0.66
LINC02239-201ENST00000504339 PCCAP05165 728 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms