RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 COL4A5P29400 1685 aa18.25■□□□□ 0.51
PDLIM7-211ENST00000504318 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
PDLIM7-211ENST00000504318 HDGFL1Q5TGJ6 251 aa18.25■□□□□ 0.51
PDLIM7-211ENST00000504318 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
PDLIM7-211ENST00000504318 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
PDLIM7-211ENST00000504318 CCDC27Q2M243 656 aa18.24■□□□□ 0.51
PDLIM7-211ENST00000504318 SOGA3Q5TF21 947 aa18.24■□□□□ 0.51
PDLIM7-211ENST00000504318 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
PDLIM7-211ENST00000504318 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
PDLIM7-211ENST00000504318 CCDC93Q567U6 631 aa18.23■□□□□ 0.51
PDLIM7-211ENST00000504318 RBM46Q8TBY0 533 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-211ENST00000504318 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
PDLIM7-211ENST00000504318 COL4A1P02462 1669 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 GNAI1P63096 354 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 SYNE4Q8N205 404 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 TAF1P21675 1872 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
PDLIM7-211ENST00000504318 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-211ENST00000504318 ALDH1B1P30837 517 aa18.21■□□□□ 0.51
PDLIM7-211ENST00000504318 FKBP4Q02790 459 aaKnown RBP eCLIP18.21■□□□□ 0.51
PDLIM7-211ENST00000504318 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
PDLIM7-211ENST00000504318 CRAMP1Q96RY5 1269 aa18.21■□□□□ 0.51
PDLIM7-211ENST00000504318 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-211ENST00000504318 HSP90AB3PQ58FF7 597 aa18.2■□□□□ 0.5
PDLIM7-211ENST00000504318 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
PDLIM7-211ENST00000504318 TSPYL6Q8N831 410 aa18.2■□□□□ 0.5
PDLIM7-211ENST00000504318 LRRC37AA6NMS7 1700 aa18.19■□□□□ 0.5
PDLIM7-211ENST00000504318 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-211ENST00000504318 ANKRD13DQ6ZTN6 518 aa18.19■□□□□ 0.5
PDLIM7-211ENST00000504318 PSMD1Q99460 953 aa18.19■□□□□ 0.5
PDLIM7-211ENST00000504318 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
PDLIM7-211ENST00000504318 RTKN2Q8IZC4 609 aa18.18■□□□□ 0.5
PDLIM7-211ENST00000504318 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-211ENST00000504318 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
PDLIM7-211ENST00000504318 ZNF277Q9NRM2 450 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-211ENST00000504318 SCN4AP35499 1836 aa18.17■□□□□ 0.5
PDLIM7-211ENST00000504318 TRIM28Q13263 835 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-211ENST00000504318 ABCC4O15439 1325 aa18.17■□□□□ 0.5
PDLIM7-211ENST00000504318 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
PDLIM7-211ENST00000504318 FZD9O00144 591 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 ANP32CO43423 234 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 VEGFAP15692 232 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 FSTL1Q12841 308 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 SH3TC1Q8TE82 1336 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 ZNF541Q9H0D2 1346 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
PDLIM7-211ENST00000504318 DDNO94850 711 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-211ENST00000504318 CC2D2BQ6DHV5 1058 aa18.15■□□□□ 0.5
PDLIM7-211ENST00000504318 DNAJC5GQ8N7S2 189 aa18.15■□□□□ 0.5
PDLIM7-211ENST00000504318 L3MBTL3Q96JM7 780 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-211ENST00000504318 IL16Q14005 1332 aa18.15■□□□□ 0.5
PDLIM7-211ENST00000504318 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
PDLIM7-211ENST00000504318 PPEF1O14829 653 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-211ENST00000504318 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-211ENST00000504318 TRMT112Q9UI30 125 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-211ENST00000504318 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
PDLIM7-211ENST00000504318 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
PDLIM7-211ENST00000504318 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
PDLIM7-211ENST00000504318 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
PDLIM7-211ENST00000504318 APLP1P51693 650 aa18.12■□□□□ 0.49
PDLIM7-211ENST00000504318 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 POTEJP0CG39 1038 aa18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 SF3B3Q15393 1217 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 SMC1BQ8NDV3 1235 aa18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 FAM89AQ96GI7 184 aa18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-211ENST00000504318 FANCIQ9NVI1 1328 aa18.1■□□□□ 0.49
PDLIM7-211ENST00000504318 GRIPAP1Q4V328 841 aa18.1■□□□□ 0.49
PDLIM7-211ENST00000504318 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-211ENST00000504318 GRAPQ13588 217 aa18.09■□□□□ 0.49
PDLIM7-211ENST00000504318 CCDC30Q5VVM6 783 aa18.09■□□□□ 0.49
PDLIM7-211ENST00000504318 GRAPLQ8TC17 118 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-211ENST00000504318 BBOX1O75936 387 aa18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 HTRA3P83110 453 aa18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 TWISTNBQ3B726 338 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 G2E3Q7L622 706 aa18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 WDR63Q8IWG1 891 aa18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 SP8Q8IXZ3 490 aa18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 METTL22Q9BUU2 404 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-211ENST00000504318 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 TCERG1O14776 1098 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 IGKV5-2P06315 115 aa18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 GOLGA2Q08379 1002 aa18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 ZBTB38Q8NAP3 1195 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-211ENST00000504318 CELF1Q92879 486 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms