RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 IGF1RP08069 1367 aa8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 ADAMTS2O95450 1211 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 BMP4P12644 408 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 MARSP56192 900 aaKnown RBP8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 BTLAQ7Z6A9 289 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 HELQQ8TDG4 1101 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 KLRG1Q96E93 195 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 SAP130Q9H0E3 1048 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 KLK14Q9P0G3 267 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 LRFN2Q9ULH4 789 aa8.46□□□□□ -1.06
TRAPPC13-205ENST00000504243 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
TRAPPC13-205ENST00000504243 ZSCAN1Q8NBB4 408 aa8.45□□□□□ -1.06
TRAPPC13-205ENST00000504243 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
TRAPPC13-205ENST00000504243 BRD7Q9NPI1 651 aa8.45□□□□□ -1.06
TRAPPC13-205ENST00000504243 FAM13AO94988 1023 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 KCNQ4P56696 695 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 CTBSQ01459 385 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 TYRO3Q06418 890 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 IFT43Q96FT9 208 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 KCNH4Q9UQ05 1017 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 BCS1LQ9Y276 419 aa8.44□□□□□ -1.06
TRAPPC13-205ENST00000504243 EPB42P16452 691 aa8.43□□□□□ -1.06
TRAPPC13-205ENST00000504243 CD33P20138 364 aa8.43□□□□□ -1.06
TRAPPC13-205ENST00000504243 MAPK1P28482 360 aa8.43□□□□□ -1.06
TRAPPC13-205ENST00000504243 DMGDHQ9UI17 866 aaKnown RBP8.43□□□□□ -1.06
TRAPPC13-205ENST00000504243 MICAL2O94851 1124 aa8.42□□□□□ -1.06
TRAPPC13-205ENST00000504243 MPSTP25325 297 aa8.42□□□□□ -1.06
TRAPPC13-205ENST00000504243 RANGAP1P46060 587 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC13-205ENST00000504243 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
TRAPPC13-205ENST00000504243 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC13-205ENST00000504243 STIM2Q9P246 746 aa8.42□□□□□ -1.06
TRAPPC13-205ENST00000504243 FAM181BA6NEQ2 426 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 C2CD2LO14523 706 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 IDH3AP50213 366 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 ARSDP51689 593 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 GOLGA6L1Q8N7Z2 621 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 TMC1Q8TDI8 760 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 OXCT2Q9BYC2 517 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 STRN4Q9NRL3 753 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 LRRC4BQ9NT99 713 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 GDF2Q9UK05 429 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
TRAPPC13-205ENST00000504243 ARAFP10398 606 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 INPP5BP32019 993 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 TREML1Q86YW5 311 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 C11orf16Q9NQ32 467 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 HCN2Q9UL51 889 aa8.4□□□□□ -1.06
TRAPPC13-205ENST00000504243 TNFRSF10BO14763 440 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 BCRP11274 1271 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 MAP3K10Q02779 954 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 ALKBH2Q6NS38 261 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 ACDQ96AP0 544 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 ENAMQ9NRM1 1142 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 DCTN4Q9UJW0 460 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 BRPF3Q9ULD4 1205 aa8.39□□□□□ -1.07
TRAPPC13-205ENST00000504243 CELA2BP08218 269 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 ZNF468Q5VIY5 522 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 ZNF385CQ66K41 422 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
TRAPPC13-205ENST00000504243 NDUFB5O43674 189 aa8.37□□□□□ -1.07
TRAPPC13-205ENST00000504243 ADH6P28332 368 aa8.37□□□□□ -1.07
TRAPPC13-205ENST00000504243 ARHGAP4P98171 946 aa8.37□□□□□ -1.07
TRAPPC13-205ENST00000504243 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC13-205ENST00000504243 ETFBKMTQ8IXQ9 262 aa8.37□□□□□ -1.07
TRAPPC13-205ENST00000504243 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
TRAPPC13-205ENST00000504243 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 OPLAHO14841 1288 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 OIP5O43482 229 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 ERCC3P19447 782 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 SLCO4C1Q6ZQN7 724 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 WHAMMQ8TF30 809 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
TRAPPC13-205ENST00000504243 CCINQ13939 588 aa8.35□□□□□ -1.07
TRAPPC13-205ENST00000504243 SYT9Q86SS6 491 aa8.35□□□□□ -1.07
TRAPPC13-205ENST00000504243 ATCAYQ86WG3 371 aa8.35□□□□□ -1.07
TRAPPC13-205ENST00000504243 TTC16Q8NEE8 873 aa8.35□□□□□ -1.07
TRAPPC13-205ENST00000504243 PNMA5Q96PV4 448 aa8.35□□□□□ -1.07
TRAPPC13-205ENST00000504243 RTCBQ9Y3I0 505 aaKnown RBP8.35□□□□□ -1.07
TRAPPC13-205ENST00000504243 NEURL1BA8MQ27 555 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 ZBTB39O15060 712 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 SIN3BO75182 1162 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 NPR3P17342 541 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 ZAP70P43403 619 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 ECM1Q16610 540 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 GALNT6Q8NCL4 622 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 PIK3R5Q8WYR1 880 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 ZNF428Q96B54 188 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms