RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 ANAPC15P60006 121 aa11.66□□□□□ -0.54
KLHL3-204ENST00000504208 PTF1AQ7RTS3 328 aa11.66□□□□□ -0.54
KLHL3-204ENST00000504208 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
KLHL3-204ENST00000504208 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
KLHL3-204ENST00000504208 TUBGCP6Q96RT7 1819 aa11.66□□□□□ -0.54
KLHL3-204ENST00000504208 C4BP0C0L5 1744 aa11.65□□□□□ -0.54
KLHL3-204ENST00000504208 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
KLHL3-204ENST00000504208 CWF19L2Q2TBE0 894 aaKnown RBP11.65□□□□□ -0.54
KLHL3-204ENST00000504208 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
KLHL3-204ENST00000504208 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 ANKRD36CQ5JPF3 1778 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 K7ELQ4 463 aaPredicted RBP11.64□□□□□ -0.55
KLHL3-204ENST00000504208 MCCP23508 829 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 CHMLP26374 656 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 AIMP1Q12904 312 aaKnown RBP11.64□□□□□ -0.55
KLHL3-204ENST00000504208 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
KLHL3-204ENST00000504208 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
KLHL3-204ENST00000504208 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 KAZALD1Q96I82 304 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 SUCLG2Q96I99 432 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 ESYT1Q9BSJ8 1104 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 UBR3Q6ZT12 1888 aa11.64□□□□□ -0.55
KLHL3-204ENST00000504208 TRIM37O94972 964 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 MYL6BP14649 208 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 DDIT3P35638 169 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 MCM2P49736 904 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 OS9Q13438 667 aaPredicted RBP11.63□□□□□ -0.55
KLHL3-204ENST00000504208 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 PI4K2BQ8TCG2 481 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
KLHL3-204ENST00000504208 MYD88Q99836 296 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
KLHL3-204ENST00000504208 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
KLHL3-204ENST00000504208 COPRSQ9NQ92 184 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
KLHL3-204ENST00000504208 ST18O60284 1047 aa11.62□□□□□ -0.55
KLHL3-204ENST00000504208 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
KLHL3-204ENST00000504208 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
KLHL3-204ENST00000504208 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
KLHL3-204ENST00000504208 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
KLHL3-204ENST00000504208 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
KLHL3-204ENST00000504208 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
KLHL3-204ENST00000504208 RUFY2Q8WXA3 655 aa11.62□□□□□ -0.55
KLHL3-204ENST00000504208 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
KLHL3-204ENST00000504208 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
KLHL3-204ENST00000504208 H7C1W4 665 aa11.61□□□□□ -0.55
KLHL3-204ENST00000504208 HIP1O00291 1037 aa11.61□□□□□ -0.55
KLHL3-204ENST00000504208 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
KLHL3-204ENST00000504208 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
KLHL3-204ENST00000504208 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
KLHL3-204ENST00000504208 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
KLHL3-204ENST00000504208 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
KLHL3-204ENST00000504208 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 STARD3NLO95772 234 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 PTMSP20962 102 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 CASP7P55210 303 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 SIK1P57059 783 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 NUTM1Q86Y26 1132 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 DNAJC10Q8IXB1 793 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 RILPL2Q969X0 211 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 CWC22Q9HCG8 908 aaKnown RBP11.6□□□□□ -0.55
KLHL3-204ENST00000504208 NUP98P52948 1817 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
KLHL3-204ENST00000504208 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
KLHL3-204ENST00000504208 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
KLHL3-204ENST00000504208 FBXO3Q9UK99 471 aa11.59□□□□□ -0.55
KLHL3-204ENST00000504208 A0A087WZG4 1122 aa11.58□□□□□ -0.55
KLHL3-204ENST00000504208 SGSM2O43147 1006 aa11.58□□□□□ -0.55
KLHL3-204ENST00000504208 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.55
KLHL3-204ENST00000504208 SASH1O94885 1247 aa11.58□□□□□ -0.55
KLHL3-204ENST00000504208 ADRA2BP18089 450 aa11.58□□□□□ -0.55
KLHL3-204ENST00000504208 ATP6V1AP38606 617 aa11.58□□□□□ -0.55
KLHL3-204ENST00000504208 RFX5P48382 616 aaPredicted RBP11.58□□□□□ -0.55
KLHL3-204ENST00000504208 ITPK1Q13572 414 aa11.58□□□□□ -0.56
KLHL3-204ENST00000504208 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
KLHL3-204ENST00000504208 CCNL1Q9UK58 526 aaPredicted RBP11.58□□□□□ -0.56
KLHL3-204ENST00000504208 HSP90AA1P07900 732 aaKnown RBP11.57□□□□□ -0.56
KLHL3-204ENST00000504208 HSPA4P34932 840 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 DEKP35659 375 aaKnown RBP11.57□□□□□ -0.56
KLHL3-204ENST00000504208 PIP4K2AP48426 406 aaPredicted RBP11.57□□□□□ -0.56
KLHL3-204ENST00000504208 PTPN12Q05209 780 aaKnown RBP11.57□□□□□ -0.56
KLHL3-204ENST00000504208 HSP90AB3PQ58FF7 597 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 CLEC17AQ6ZS10 378 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 AACSQ86V21 672 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 ISCA1Q9BUE6 129 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 RAD50Q92878 1312 aa11.57□□□□□ -0.56
KLHL3-204ENST00000504208 DDX11L8A8MPP1 907 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 A1BGP04217 495 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 CYP19A1P11511 503 aaPredicted RBP11.56□□□□□ -0.56
KLHL3-204ENST00000504208 KCNQ4P56696 695 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 NUCB2P80303 420 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 TCIRG1Q13488 830 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 TSHZ3Q63HK5 1081 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 KIAA1211Q6ZU35 1233 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 UBE3BQ7Z3V4 1068 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
KLHL3-204ENST00000504208 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms