RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CPLX3Q8WVH0 158 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 ITSN2Q9NZM3 1697 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 MAP2K1Q02750 393 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 TSPY3P0CV98 308 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 TSPY8P0CW00 308 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 PTPN14Q15678 1187 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 TRMT1LQ7Z2T5 733 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 BICD1Q96G01 975 aa8.28□□□□□ -1.08
SYNPO2-205ENST00000504178 KIF2AO00139 706 aaPredicted RBP8.27□□□□□ -1.08
SYNPO2-205ENST00000504178 CETN1Q12798 172 aa8.27□□□□□ -1.08
SYNPO2-205ENST00000504178 UBXN4Q92575 508 aa8.27□□□□□ -1.08
SYNPO2-205ENST00000504178 NEK1Q96PY6 1258 aa8.27□□□□□ -1.08
SYNPO2-205ENST00000504178 CRACR2AQ9BSW2 395 aa8.27□□□□□ -1.08
SYNPO2-205ENST00000504178 PPIP5K1Q6PFW1 1433 aa8.27□□□□□ -1.08
SYNPO2-205ENST00000504178 KDM5BQ9UGL1 1544 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 MCM3P25205 808 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 CTNNA2P26232 953 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 SSFA2P28290 1259 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 STX1AQ16623 288 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 PYM1Q9BRP8 204 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 C14orf93Q9H972 538 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 TTC21AQ8NDW8 1320 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 MAP9Q49MG5 647 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 CKAP2LQ8IYA6 745 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 ZCRB1Q8TBF4 217 aaKnown RBP8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 HDAC9Q9UKV0 1011 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 HMG20BQ9P0W2 317 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 RAPGEF6Q8TEU7 1601 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 GSTTP1A0A1W2PQM5 241 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 IFFO1Q0D2I5 559 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 MICU3Q86XE3 530 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 ALS2CR12Q96Q35 445 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 LRRC27Q9C0I9 530 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 PI4KAP2A4QPH2 592 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 GCOM1H8Y6P7 765 aaPredicted RBP8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 PRC1O43663 620 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 MYZAPP0CAP1 466 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 USP8P40818 1118 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 TTC22Q5TAA0 569 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 TCERG1LQ5VWI1 586 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 PI4KAP1Q8N8J0 262 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
SYNPO2-205ENST00000504178 MACROD2A1Z1Q3 448 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 ZGPATQ8N5A5 531 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 CHPF2Q9P2E5 772 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 PUF60Q9UHX1 559 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 TMCO3Q6UWJ1 677 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 KRT23Q9C075 422 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 MMRN2Q9H8L6 949 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 DDX19AQ9NUU7 478 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 EXOC1Q9NV70 894 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 SLC4A4Q9Y6R1 1079 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 TSHZ3Q63HK5 1081 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 TBC1D9Q6ZT07 1266 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 CADPS2Q86UW7 1296 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 F8W031 263 aaPredicted RBP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 TBCAO75347 108 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 CYP7A1P22680 504 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 TMC6Q7Z403 805 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 PICALMQ13492 652 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 WTAPQ15007 396 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 IFIT1BQ5T764 474 aaKnown RBP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 ZNF804AQ7Z570 1209 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 RALGAPBQ86X10 1494 aa8.26□□□□□ -1.09
SYNPO2-205ENST00000504178 BIN1O00499 593 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 CA8P35219 290 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 KANK3Q6NY19 840 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 HOOK3Q86VS8 718 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 ORC3Q9UBD5 711 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 STX6O43752 255 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 URI1O94763 535 aaPredicted RBP8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 IDEP14735 1019 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 THOC2Q8NI27 1593 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 IL16Q14005 1332 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 SHTN1A0MZ66 631 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 STAMBPO95630 424 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 DUOX2Q9NRD8 1548 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 TEX14Q8IWB6 1497 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 TMCO5BA8MYB1 307 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 MCM5P33992 734 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 SKAP1Q86WV1 359 aa8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 UTP14AQ9BVJ6 771 aaKnown RBP8.25□□□□□ -1.09
SYNPO2-205ENST00000504178 ERICH4A6NGS2 130 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 C11orf95C9JLR9 678 aaPredicted RBP8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 PAFAH1B1P43034 410 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 ERMNQ8TAM6 284 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 HEATR3Q7Z4Q2 680 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 TNPO1Q92973 898 aaKnown RBP8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 PANK2Q9BZ23 570 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 INCENPQ9NQS7 918 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 MAP3K1Q13233 1512 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 ANXA1P04083 346 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 PPP4R3BQ5MIZ7 849 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 ISM2Q6H9L7 571 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 PDCL2Q8N4E4 241 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 KIF18AQ8NI77 898 aa8.24□□□□□ -1.09
SYNPO2-205ENST00000504178 XAGE3Q8WTP9 111 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms