RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 KCNB2Q92953 911 aa21.02■□□□□ 0.96
POLR2J3-209ENST00000504157 SETD1AO15047 1707 aaKnown RBP21.02■□□□□ 0.95
POLR2J3-209ENST00000504157 WASLO00401 505 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 SYT10Q6XYQ8 523 aa21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 AKAP12Q02952 1782 aa21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 ADGRL3Q9HAR2 1447 aa21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 ZRANB2O95218 330 aaKnown RBP eCLIP21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 NEK11Q8NG66 645 aa21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 SSH3Q8TE77 659 aa21.01■□□□□ 0.95
POLR2J3-209ENST00000504157 KRT85P78386 507 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 FAM208AQ9UK61 1670 aaKnown RBP21■□□□□ 0.95
POLR2J3-209ENST00000504157 TTC21AQ8NDW8 1320 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 CAVIN2O95810 425 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 SARM1Q6SZW1 724 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 CNTROBQ8N137 903 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 CCAR2Q8N163 923 aaKnown RBP21■□□□□ 0.95
POLR2J3-209ENST00000504157 STK31Q9BXU1 1019 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 TNMDQ9H2S6 317 aa21■□□□□ 0.95
POLR2J3-209ENST00000504157 DDX19AQ9NUU7 478 aaKnown RBP21■□□□□ 0.95
POLR2J3-209ENST00000504157 MYO1CO00159 1063 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 LARGE1O95461 756 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 SKILP12757 684 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 LIG1P18858 919 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 CASQ1P31415 396 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 ERCC6LQ2NKX8 1250 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 KRBA2Q6ZNG9 492 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 TTC6Q86TZ1 520 aa20.99■□□□□ 0.95
POLR2J3-209ENST00000504157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 FLIIQ13045 1269 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 CAMK4Q16566 473 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 CCDC83Q8IWF9 413 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 UBXN6Q9BZV1 441 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 TSPYL4Q9UJ04 414 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 MRFAP1L1Q96HT8 127 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 ZSWIM6Q9HCJ5 1215 aa20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 LRRFIP2Q9Y608 721 aaKnown RBP20.98■□□□□ 0.95
POLR2J3-209ENST00000504157 CASTP20810 708 aaKnown RBP20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 ZNF165P49910 485 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 ZBTB9Q96C00 473 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 CCZ1BP86790 482 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 CCZ1P86791 482 aaPredicted RBP20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 POLA2Q14181 598 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 CKAP2LQ8IYA6 745 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 ATG3Q9NT62 314 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 PDRG1Q9NUG6 133 aa20.97■□□□□ 0.95
POLR2J3-209ENST00000504157 ATP8B1O43520 1251 aa20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 GPS2Q13227 327 aa20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 NPHP1O15259 732 aa20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 GTF2A1P52655 376 aaPredicted RBP20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 ST3GAL1Q11201 340 aa20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 ICE2Q659A1 982 aa20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 CLSTN2Q9H4D0 955 aa20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 CWC15Q9P013 229 aaKnown RBP20.96■□□□□ 0.95
POLR2J3-209ENST00000504157 NPHP3Q7Z494 1330 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 TTC21BQ7Z4L5 1316 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 SOX12O15370 315 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 PDCP20941 246 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 ARID5BQ14865 1188 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 ZSCAN26Q16670 478 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 DACT1Q9NYF0 836 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 A2ML1A8K2U0 1454 aa20.95■□□□□ 0.94
POLR2J3-209ENST00000504157 CYP46A1Q9Y6A2 500 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 CCDC61Q9Y6R9 512 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 VPS37CA5D8V6 355 aaPredicted RBP20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 NUTM1Q86Y26 1132 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 RUFY2Q8WXA3 655 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 SMARCE1Q969G3 411 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 NUDT16Q96DE0 195 aaKnown RBP20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 IL1RAPL2Q9NP60 686 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 ARGLU1Q9NWB6 273 aaPredicted RBP20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 TRMT1Q9NXH9 659 aaKnown RBP20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
POLR2J3-209ENST00000504157 OVOS2A0A0J9YW53 1432 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 OVOS2Q6IE36 1432 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 CCDC69A6NI79 296 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 TRIM66O15016 1216 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 POLR3GO15318 223 aaPredicted RBP20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 ARHGAP29Q52LW3 1261 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 TMCO3Q6UWJ1 677 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 C10orf67Q8IYJ2 551 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 CCDC191Q8NCU4 936 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 USP44Q9H0E7 712 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 LCMT1Q9UIC8 334 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 ST5P78524 1137 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 BRMS1Q9HCU9 246 aa20.93■□□□□ 0.94
POLR2J3-209ENST00000504157 CACNA1FO60840 1977 aa20.92■□□□□ 0.94
POLR2J3-209ENST00000504157 UBTFL1P0CB47 393 aaPredicted RBP20.92■□□□□ 0.94
POLR2J3-209ENST00000504157 LARP6Q9BRS8 491 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms