RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 CWC25Q9NXE8 425 aaPredicted RBP23.1■■□□□ 1.29
DDR1-252ENST00000504152 TGFB2P61812 414 aa23.09■■□□□ 1.29
DDR1-252ENST00000504152 RCAN3Q9UKA8 241 aa23.09■■□□□ 1.29
DDR1-252ENST00000504152 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 NRXN2Q9P2S2 1712 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 NTSR2O95665 410 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 IGKV5-2P06315 115 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 PDE6BP35913 854 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 ERFEQ4G0M1 354 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 NUTM1Q86Y26 1132 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 CCDC24Q8N4L8 307 aa23.08■■□□□ 1.29
DDR1-252ENST00000504152 FRAT1Q92837 279 aaPredicted RBP23.08■■□□□ 1.29
DDR1-252ENST00000504152 IBTKQ9P2D0 1353 aaPredicted RBP23.08■■□□□ 1.29
DDR1-252ENST00000504152 NEURL1BA8MQ27 555 aa23.07■■□□□ 1.28
DDR1-252ENST00000504152 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
DDR1-252ENST00000504152 SH3TC1Q8TE82 1336 aa23.07■■□□□ 1.28
DDR1-252ENST00000504152 CWF19L2Q2TBE0 894 aaKnown RBP23.06■■□□□ 1.28
DDR1-252ENST00000504152 SLC10A5Q5PT55 438 aa23.06■■□□□ 1.28
DDR1-252ENST00000504152 BEND3Q5T5X7 828 aa23.06■■□□□ 1.28
DDR1-252ENST00000504152 C10orf71Q711Q0 1435 aa23.06■■□□□ 1.28
DDR1-252ENST00000504152 H0YIN7 160 aa23.05■■□□□ 1.28
DDR1-252ENST00000504152 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
DDR1-252ENST00000504152 FAM89AQ96GI7 184 aa23.05■■□□□ 1.28
DDR1-252ENST00000504152 SRCIN1Q9C0H9 1055 aa23.05■■□□□ 1.28
DDR1-252ENST00000504152 ALDH1L1O75891 902 aa23.04■■□□□ 1.28
DDR1-252ENST00000504152 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
DDR1-252ENST00000504152 GCKRQ14397 625 aa23.04■■□□□ 1.28
DDR1-252ENST00000504152 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
DDR1-252ENST00000504152 A0A0G2JLW4 131 aa23.03■■□□□ 1.28
DDR1-252ENST00000504152 PCCAP05165 728 aaPredicted RBP23.03■■□□□ 1.28
DDR1-252ENST00000504152 ATF7IPQ6VMQ6 1270 aa23.03■■□□□ 1.28
DDR1-252ENST00000504152 NLGN2Q8NFZ4 835 aa23.03■■□□□ 1.28
DDR1-252ENST00000504152 NLRP3Q96P20 1036 aa23.03■■□□□ 1.28
DDR1-252ENST00000504152 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
DDR1-252ENST00000504152 RTL5Q5HYW3 569 aaPredicted RBP23.02■■□□□ 1.28
DDR1-252ENST00000504152 C2CD5Q86YS7 1000 aa23.02■■□□□ 1.28
DDR1-252ENST00000504152 SYNE4Q8N205 404 aa23.02■■□□□ 1.28
DDR1-252ENST00000504152 DPEP1P16444 411 aa23.01■■□□□ 1.27
DDR1-252ENST00000504152 CCT4P50991 539 aaKnown RBP23.01■■□□□ 1.27
DDR1-252ENST00000504152 KLRG2A4D1S0 409 aaPredicted RBP23■■□□□ 1.27
DDR1-252ENST00000504152 H7C1W4 665 aa23■■□□□ 1.27
DDR1-252ENST00000504152 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
DDR1-252ENST00000504152 HCLS1P14317 486 aaPredicted RBP23■■□□□ 1.27
DDR1-252ENST00000504152 C9orf78Q9NZ63 289 aaPredicted RBP23■■□□□ 1.27
DDR1-252ENST00000504152 TRIM27P14373 513 aa22.99■■□□□ 1.27
DDR1-252ENST00000504152 CHRNA5P30532 468 aa22.99■■□□□ 1.27
DDR1-252ENST00000504152 JARID2Q92833 1246 aaPredicted RBP22.99■■□□□ 1.27
DDR1-252ENST00000504152 PIM2Q9P1W9 311 aa22.99■■□□□ 1.27
DDR1-252ENST00000504152 MS4A1P11836 297 aa22.98■■□□□ 1.27
DDR1-252ENST00000504152 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.98■■□□□ 1.27
DDR1-252ENST00000504152 SRGNP10124 158 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 KCNA3P22001 575 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 UBE3BQ7Z3V4 1068 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 ZNF622Q969S3 477 aaKnown RBP eCLIP22.97■■□□□ 1.27
DDR1-252ENST00000504152 CLUAP1Q96AJ1 413 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 MASTLQ96GX5 879 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 ABCC12Q96J65 1359 aa22.97■■□□□ 1.27
DDR1-252ENST00000504152 ANKRD31Q8N7Z5 1873 aa22.96■■□□□ 1.27
DDR1-252ENST00000504152 GRM8O00222 908 aa22.96■■□□□ 1.27
DDR1-252ENST00000504152 PDE8AO60658 829 aa22.96■■□□□ 1.27
DDR1-252ENST00000504152 NPR1P16066 1061 aa22.96■■□□□ 1.27
DDR1-252ENST00000504152 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
DDR1-252ENST00000504152 RPGRQ92834 1020 aaKnown RBP22.96■■□□□ 1.27
DDR1-252ENST00000504152 RIC1Q4ADV7 1423 aa22.96■■□□□ 1.27
DDR1-252ENST00000504152 PXDNLA1KZ92 1463 aa22.96■■□□□ 1.27
DDR1-252ENST00000504152 STYK1Q6J9G0 422 aa22.95■■□□□ 1.26
DDR1-252ENST00000504152 N4BP2Q86UW6 1770 aaPredicted RBP22.95■■□□□ 1.26
DDR1-252ENST00000504152 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
DDR1-252ENST00000504152 DZIP1LQ8IYY4 767 aaKnown RBP22.95■■□□□ 1.26
DDR1-252ENST00000504152 ABCC4O15439 1325 aa22.94■■□□□ 1.26
DDR1-252ENST00000504152 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
DDR1-252ENST00000504152 CRY2Q49AN0 593 aa22.94■■□□□ 1.26
DDR1-252ENST00000504152 CNKSR1Q969H4 720 aa22.94■■□□□ 1.26
DDR1-252ENST00000504152 CASP7P55210 303 aa22.93■■□□□ 1.26
DDR1-252ENST00000504152 SF3B3Q15393 1217 aaKnown RBP22.93■■□□□ 1.26
DDR1-252ENST00000504152 DALRD3Q5D0E6 543 aaKnown RBP22.93■■□□□ 1.26
DDR1-252ENST00000504152 TTLL6Q8N841 843 aa22.93■■□□□ 1.26
DDR1-252ENST00000504152 RBM17Q96I25 401 aaKnown RBP22.93■■□□□ 1.26
DDR1-252ENST00000504152 TNNQ9UQP3 1299 aa22.93■■□□□ 1.26
DDR1-252ENST00000504152 HOXA10P31260 410 aaPredicted RBP22.92■■□□□ 1.26
DDR1-252ENST00000504152 C3orf67Q6ZVT6 689 aa22.92■■□□□ 1.26
DDR1-252ENST00000504152 USP44Q9H0E7 712 aa22.92■■□□□ 1.26
DDR1-252ENST00000504152 UTYO14607 1347 aa22.91■■□□□ 1.26
DDR1-252ENST00000504152 PLIN1O60240 522 aa22.91■■□□□ 1.26
DDR1-252ENST00000504152 GPR162Q16538 588 aa22.91■■□□□ 1.26
DDR1-252ENST00000504152 DDX46Q7L014 1031 aaKnown RBP22.91■■□□□ 1.26
DDR1-252ENST00000504152 PELP1Q8IZL8 1130 aaKnown RBP22.91■■□□□ 1.26
DDR1-252ENST00000504152 PLA2G12BQ9BX93 195 aa22.91■■□□□ 1.26
DDR1-252ENST00000504152 HDAC5Q9UQL6 1122 aa22.91■■□□□ 1.26
DDR1-252ENST00000504152 BCS1LQ9Y276 419 aa22.91■■□□□ 1.26
DDR1-252ENST00000504152 NBPF7P0C2Y1 421 aaPredicted RBP22.9■■□□□ 1.26
DDR1-252ENST00000504152 CCDC152Q4G0S7 254 aa22.9■■□□□ 1.26
DDR1-252ENST00000504152 TMEM57Q8N5G2 664 aa22.9■■□□□ 1.26
DDR1-252ENST00000504152 CRAMP1Q96RY5 1269 aa22.9■■□□□ 1.26
DDR1-252ENST00000504152 WWC3Q9ULE0 1092 aa22.9■■□□□ 1.26
DDR1-252ENST00000504152 KIAA1551Q9HCM1 1747 aa22.9■■□□□ 1.26
DDR1-252ENST00000504152 DDX60Q8IY21 1712 aaKnown RBP22.88■■□□□ 1.25
DDR1-252ENST00000504152 CTSWP56202 376 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms