RNA–Protein interactions for RNA: ENST00000504086.1

ITGA1-202, Transcript of integrin subunit alpha 1, humanhuman

TSL 2

Gene ITGA1, Length 1,366 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-202ENST00000504086 IBTKQ9P2D0 1353 aaPredicted RBP22.48■■□□□ 1.19
ITGA1-202ENST00000504086 YTHDC1Q96MU7 727 aaKnown RBP22.48■■□□□ 1.19
ITGA1-202ENST00000504086 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
ITGA1-202ENST00000504086 ANKRD36CQ5JPF3 1778 aa22.47■■□□□ 1.19
ITGA1-202ENST00000504086 ALDH1L2Q3SY69 923 aa22.47■■□□□ 1.19
ITGA1-202ENST00000504086 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
ITGA1-202ENST00000504086 ABCC12Q96J65 1359 aa22.47■■□□□ 1.19
ITGA1-202ENST00000504086 N4BP2Q86UW6 1770 aaPredicted RBP22.47■■□□□ 1.19
ITGA1-202ENST00000504086 DNAAF4Q8WXU2 420 aa22.46■■□□□ 1.19
ITGA1-202ENST00000504086 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
ITGA1-202ENST00000504086 PIM2Q9P1W9 311 aa22.46■■□□□ 1.19
ITGA1-202ENST00000504086 BCS1LQ9Y276 419 aa22.46■■□□□ 1.19
ITGA1-202ENST00000504086 RTL5Q5HYW3 569 aaPredicted RBP22.45■■□□□ 1.18
ITGA1-202ENST00000504086 SH3TC1Q8TE82 1336 aa22.44■■□□□ 1.18
ITGA1-202ENST00000504086 F6X3S4 739 aa22.44■■□□□ 1.18
ITGA1-202ENST00000504086 CWC25Q9NXE8 425 aaPredicted RBP22.44■■□□□ 1.18
ITGA1-202ENST00000504086 PDZRN3Q9UPQ7 1066 aa22.44■■□□□ 1.18
ITGA1-202ENST00000504086 KIAA1551Q9HCM1 1747 aa22.43■■□□□ 1.18
ITGA1-202ENST00000504086 RNF123Q5XPI4 1314 aa22.43■■□□□ 1.18
ITGA1-202ENST00000504086 KCNA3P22001 575 aa22.43■■□□□ 1.18
ITGA1-202ENST00000504086 TRIM28Q13263 835 aaKnown RBP22.43■■□□□ 1.18
ITGA1-202ENST00000504086 CCDC191Q8NCU4 936 aa22.43■■□□□ 1.18
ITGA1-202ENST00000504086 CACNA1FO60840 1977 aa22.42■■□□□ 1.18
ITGA1-202ENST00000504086 YBX3P16989 372 aaKnown RBP eCLIP22.42■■□□□ 1.18
ITGA1-202ENST00000504086 CWF19L2Q2TBE0 894 aaKnown RBP22.42■■□□□ 1.18
ITGA1-202ENST00000504086 DALRD3Q5D0E6 543 aaKnown RBP22.42■■□□□ 1.18
ITGA1-202ENST00000504086 SLC4A10Q6U841 1118 aa22.42■■□□□ 1.18
ITGA1-202ENST00000504086 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
ITGA1-202ENST00000504086 ANKRD31Q8N7Z5 1873 aa22.42■■□□□ 1.18
ITGA1-202ENST00000504086 HCLS1P14317 486 aaPredicted RBP22.41■■□□□ 1.18
ITGA1-202ENST00000504086 RARSP54136 660 aaKnown RBP22.41■■□□□ 1.18
ITGA1-202ENST00000504086 SYNE4Q8N205 404 aa22.41■■□□□ 1.18
ITGA1-202ENST00000504086 PTPRCP08575 1304 aa22.41■■□□□ 1.18
ITGA1-202ENST00000504086 IGKV5-2P06315 115 aa22.4■■□□□ 1.18
ITGA1-202ENST00000504086 MASTLQ96GX5 879 aa22.4■■□□□ 1.18
ITGA1-202ENST00000504086 NLRP3Q96P20 1036 aa22.4■■□□□ 1.18
ITGA1-202ENST00000504086 NEURL1BA8MQ27 555 aa22.39■■□□□ 1.18
ITGA1-202ENST00000504086 SRGNP10124 158 aa22.39■■□□□ 1.18
ITGA1-202ENST00000504086 TTLL6Q8N841 843 aa22.39■■□□□ 1.18
ITGA1-202ENST00000504086 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.18
ITGA1-202ENST00000504086 GRIN3BO60391 1043 aa22.38■■□□□ 1.17
ITGA1-202ENST00000504086 NPR1P16066 1061 aa22.38■■□□□ 1.17
ITGA1-202ENST00000504086 STYK1Q6J9G0 422 aa22.38■■□□□ 1.17
ITGA1-202ENST00000504086 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
ITGA1-202ENST00000504086 LINS1Q8NG48 757 aa22.38■■□□□ 1.17
ITGA1-202ENST00000504086 JARID2Q92833 1246 aaPredicted RBP22.38■■□□□ 1.17
ITGA1-202ENST00000504086 COL11A2P13942 1736 aaPredicted RBP22.38■■□□□ 1.17
ITGA1-202ENST00000504086 RIC1Q4ADV7 1423 aa22.38■■□□□ 1.17
ITGA1-202ENST00000504086 IRS4O14654 1257 aaPredicted RBP22.38■■□□□ 1.17
ITGA1-202ENST00000504086 CNKSR1Q969H4 720 aa22.38■■□□□ 1.17
ITGA1-202ENST00000504086 NOB1Q9ULX3 412 aaKnown RBP22.38■■□□□ 1.17
ITGA1-202ENST00000504086 TNRC6CQ9HCJ0 1690 aaKnown RBP22.38■■□□□ 1.17
ITGA1-202ENST00000504086 PCCAP05165 728 aaPredicted RBP22.37■■□□□ 1.17
ITGA1-202ENST00000504086 SLC10A5Q5PT55 438 aa22.37■■□□□ 1.17
ITGA1-202ENST00000504086 C3orf67Q6ZVT6 689 aa22.37■■□□□ 1.17
ITGA1-202ENST00000504086 ZNF219Q9P2Y4 722 aaPredicted RBP22.37■■□□□ 1.17
ITGA1-202ENST00000504086 KIF16BQ96L93 1317 aa22.36■■□□□ 1.17
ITGA1-202ENST00000504086 KLRG2A4D1S0 409 aaPredicted RBP22.36■■□□□ 1.17
ITGA1-202ENST00000504086 HSP90B1P14625 803 aaKnown RBP22.36■■□□□ 1.17
ITGA1-202ENST00000504086 GCKRQ14397 625 aa22.35■■□□□ 1.17
ITGA1-202ENST00000504086 BEND3Q5T5X7 828 aa22.35■■□□□ 1.17
ITGA1-202ENST00000504086 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
ITGA1-202ENST00000504086 RBM17Q96I25 401 aaKnown RBP22.35■■□□□ 1.17
ITGA1-202ENST00000504086 SRCIN1Q9C0H9 1055 aa22.35■■□□□ 1.17
ITGA1-202ENST00000504086 DLEC1Q9Y238 1755 aa22.34■■□□□ 1.17
ITGA1-202ENST00000504086 BCAR3O75815 825 aa22.34■■□□□ 1.17
ITGA1-202ENST00000504086 CRY2Q49AN0 593 aa22.34■■□□□ 1.17
ITGA1-202ENST00000504086 PRPF40BQ6NWY9 871 aaKnown RBP22.34■■□□□ 1.17
ITGA1-202ENST00000504086 UBE3BQ7Z3V4 1068 aa22.34■■□□□ 1.17
ITGA1-202ENST00000504086 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
ITGA1-202ENST00000504086 BRCA1P38398 1863 aaKnown RBP22.32■■□□□ 1.16
ITGA1-202ENST00000504086 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
ITGA1-202ENST00000504086 API5Q9BZZ5 524 aaKnown RBP22.32■■□□□ 1.16
ITGA1-202ENST00000504086 GOLGB1Q14789 3259 aaKnown RBP22.31■■□□□ 1.16
ITGA1-202ENST00000504086 C21orf2O43822 256 aa22.31■■□□□ 1.16
ITGA1-202ENST00000504086 BRPF1P55201 1214 aaPredicted RBP22.31■■□□□ 1.16
ITGA1-202ENST00000504086 DDX46Q7L014 1031 aaKnown RBP22.31■■□□□ 1.16
ITGA1-202ENST00000504086 IPO8O15397 1037 aaKnown RBP22.3■■□□□ 1.16
ITGA1-202ENST00000504086 PDE8AO60658 829 aa22.3■■□□□ 1.16
ITGA1-202ENST00000504086 ALDH1L1O75891 902 aa22.3■■□□□ 1.16
ITGA1-202ENST00000504086 C9orf78Q9NZ63 289 aaPredicted RBP22.3■■□□□ 1.16
ITGA1-202ENST00000504086 CDHR2Q9BYE9 1310 aa22.3■■□□□ 1.16
ITGA1-202ENST00000504086 H7C1W4 665 aa22.29■■□□□ 1.16
ITGA1-202ENST00000504086 HOXA10P31260 410 aaPredicted RBP22.28■■□□□ 1.16
ITGA1-202ENST00000504086 CCDC85AQ96PX6 553 aaPredicted RBP22.28■■□□□ 1.16
ITGA1-202ENST00000504086 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
ITGA1-202ENST00000504086 DDX60Q8IY21 1712 aaKnown RBP22.28■■□□□ 1.16
ITGA1-202ENST00000504086 GRM8O00222 908 aa22.27■■□□□ 1.16
ITGA1-202ENST00000504086 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
ITGA1-202ENST00000504086 ABCC4O15439 1325 aa22.27■■□□□ 1.16
ITGA1-202ENST00000504086 CACNA1SQ13698 1873 aa22.26■■□□□ 1.15
ITGA1-202ENST00000504086 PPEF1O14829 653 aaPredicted RBP22.26■■□□□ 1.15
ITGA1-202ENST00000504086 CTSWP56202 376 aa22.26■■□□□ 1.15
ITGA1-202ENST00000504086 SF3B3Q15393 1217 aaKnown RBP22.26■■□□□ 1.15
ITGA1-202ENST00000504086 ARHGAP45Q92619 1136 aa22.26■■□□□ 1.15
ITGA1-202ENST00000504086 CCT4P50991 539 aaKnown RBP22.25■■□□□ 1.15
ITGA1-202ENST00000504086 SOGA3Q5TF21 947 aa22.25■■□□□ 1.15
ITGA1-202ENST00000504086 ZKSCAN2Q63HK3 967 aa22.25■■□□□ 1.15
ITGA1-202ENST00000504086 TMX4Q9H1E5 349 aaPredicted RBP22.25■■□□□ 1.15
ITGA1-202ENST00000504086 LAMB2P55268 1798 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms