RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 EXOSC9Q06265 439 aaKnown RBP11.72□□□□□ -0.53
NR1I3-219ENST00000504010 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
NR1I3-219ENST00000504010 ANXA1P04083 346 aa11.71□□□□□ -0.53
NR1I3-219ENST00000504010 A1BGP04217 495 aa11.71□□□□□ -0.53
NR1I3-219ENST00000504010 SLFN5Q08AF3 891 aa11.71□□□□□ -0.53
NR1I3-219ENST00000504010 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-219ENST00000504010 NGEFQ8N5V2 710 aa11.71□□□□□ -0.53
NR1I3-219ENST00000504010 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.53
NR1I3-219ENST00000504010 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-219ENST00000504010 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-219ENST00000504010 UBR2Q8IWV8 1755 aa11.71□□□□□ -0.54
NR1I3-219ENST00000504010 COL15A1P39059 1388 aa11.7□□□□□ -0.54
NR1I3-219ENST00000504010 C21orf2O43822 256 aa11.7□□□□□ -0.54
NR1I3-219ENST00000504010 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
NR1I3-219ENST00000504010 DUSP27Q5VZP5 1158 aa11.7□□□□□ -0.54
NR1I3-219ENST00000504010 THSD7BQ9C0I4 1608 aa11.7□□□□□ -0.54
NR1I3-219ENST00000504010 IL16Q14005 1332 aa11.69□□□□□ -0.54
NR1I3-219ENST00000504010 SNRPA1P09661 255 aaKnown RBP11.69□□□□□ -0.54
NR1I3-219ENST00000504010 CYP19A1P11511 503 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-219ENST00000504010 ECE1P42892 770 aa11.69□□□□□ -0.54
NR1I3-219ENST00000504010 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
NR1I3-219ENST00000504010 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
NR1I3-219ENST00000504010 ZNF622Q969S3 477 aaKnown RBP eCLIP11.69□□□□□ -0.54
NR1I3-219ENST00000504010 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
NR1I3-219ENST00000504010 ZBED9Q6R2W3 1325 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 E9PSI1 815 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 CA12O43570 354 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 MYL6BP14649 208 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 PROSER3Q2NL68 480 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 MYH16Q9H6N6 1097 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
NR1I3-219ENST00000504010 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
NR1I3-219ENST00000504010 EAPPQ56P03 285 aaPredicted RBP11.67□□□□□ -0.54
NR1I3-219ENST00000504010 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
NR1I3-219ENST00000504010 CNTROBQ8N137 903 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
NR1I3-219ENST00000504010 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
NR1I3-219ENST00000504010 A0A087WZG4 1122 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 EPHX2P34913 555 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
NR1I3-219ENST00000504010 VAMP4O75379 141 aa11.65□□□□□ -0.54
NR1I3-219ENST00000504010 STARD3NLO95772 234 aa11.65□□□□□ -0.54
NR1I3-219ENST00000504010 MAP2K2P36507 400 aa11.65□□□□□ -0.54
NR1I3-219ENST00000504010 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
NR1I3-219ENST00000504010 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
NR1I3-219ENST00000504010 CHPF2Q9P2E5 772 aa11.65□□□□□ -0.54
NR1I3-219ENST00000504010 COL11A2P13942 1736 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-219ENST00000504010 PRPF40BQ6NWY9 871 aaKnown RBP11.64□□□□□ -0.55
NR1I3-219ENST00000504010 CAPNS2Q96L46 248 aa11.64□□□□□ -0.55
NR1I3-219ENST00000504010 GPR101Q96P66 508 aaPredicted RBP11.64□□□□□ -0.55
NR1I3-219ENST00000504010 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
NR1I3-219ENST00000504010 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
NR1I3-219ENST00000504010 SLX4Q8IY92 1834 aa11.64□□□□□ -0.55
NR1I3-219ENST00000504010 SRGNP10124 158 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 PDIA6Q15084 440 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 CCDC93Q567U6 631 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 MAP1SQ66K74 1059 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-219ENST00000504010 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 G2E3Q7L622 706 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
NR1I3-219ENST00000504010 MCOLN1Q9GZU1 580 aa11.63□□□□□ -0.55
NR1I3-219ENST00000504010 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
NR1I3-219ENST00000504010 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
NR1I3-219ENST00000504010 EIF5P55010 431 aaKnown RBP11.62□□□□□ -0.55
NR1I3-219ENST00000504010 TTLL7Q6ZT98 887 aa11.62□□□□□ -0.55
NR1I3-219ENST00000504010 GPC2Q8N158 579 aa11.62□□□□□ -0.55
NR1I3-219ENST00000504010 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 ST5P78524 1137 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 FKBP4Q02790 459 aaKnown RBP eCLIP11.61□□□□□ -0.55
NR1I3-219ENST00000504010 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 CNBD1Q8NA66 436 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 XAGE3Q8WTP9 111 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 CACNA1SQ13698 1873 aa11.61□□□□□ -0.55
NR1I3-219ENST00000504010 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 CASP8AP2Q9UKL3 1982 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 FZD9O00144 591 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 NPHP1O15259 732 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
NR1I3-219ENST00000504010 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 PAXIP1Q6ZW49 1069 aaPredicted RBP11.6□□□□□ -0.55
NR1I3-219ENST00000504010 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 HHIPL1Q96JK4 782 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms