RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 CCDC24Q8N4L8 307 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 NLGN2Q8NFZ4 835 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 CWC25Q9NXE8 425 aaPredicted RBP14.15□□□□□ -0.14
VCAN-205ENST00000503923 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
VCAN-205ENST00000503923 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
VCAN-205ENST00000503923 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.15
VCAN-205ENST00000503923 ANKRD31Q8N7Z5 1873 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 NEURL1BA8MQ27 555 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 BCAR3O75815 825 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 IGKV5-2P06315 115 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 LINS1Q8NG48 757 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 RIC1Q4ADV7 1423 aa14.14□□□□□ -0.15
VCAN-205ENST00000503923 KIAA1551Q9HCM1 1747 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 ABCC12Q96J65 1359 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
VCAN-205ENST00000503923 DPEP1P16444 411 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 CWF19L2Q2TBE0 894 aaKnown RBP14.13□□□□□ -0.15
VCAN-205ENST00000503923 SLC10A5Q5PT55 438 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 BEND3Q5T5X7 828 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
VCAN-205ENST00000503923 API5Q9BZZ5 524 aaKnown RBP14.13□□□□□ -0.15
VCAN-205ENST00000503923 N4BP2Q86UW6 1770 aaPredicted RBP14.12□□□□□ -0.15
VCAN-205ENST00000503923 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
VCAN-205ENST00000503923 H0YIN7 160 aa14.12□□□□□ -0.15
VCAN-205ENST00000503923 PCCAP05165 728 aaPredicted RBP14.12□□□□□ -0.15
VCAN-205ENST00000503923 C2CD5Q86YS7 1000 aa14.12□□□□□ -0.15
VCAN-205ENST00000503923 ZBTB38Q8NAP3 1195 aaPredicted RBP14.12□□□□□ -0.15
VCAN-205ENST00000503923 KLRG2A4D1S0 409 aaPredicted RBP14.11□□□□□ -0.15
VCAN-205ENST00000503923 ALDH1L1O75891 902 aa14.11□□□□□ -0.15
VCAN-205ENST00000503923 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
VCAN-205ENST00000503923 CHRNA5P30532 468 aa14.11□□□□□ -0.15
VCAN-205ENST00000503923 GCKRQ14397 625 aa14.11□□□□□ -0.15
VCAN-205ENST00000503923 FAM89AQ96GI7 184 aa14.11□□□□□ -0.15
VCAN-205ENST00000503923 NLRP3Q96P20 1036 aa14.11□□□□□ -0.15
VCAN-205ENST00000503923 SRCIN1Q9C0H9 1055 aa14.11□□□□□ -0.15
VCAN-205ENST00000503923 DLEC1Q9Y238 1755 aa14.1□□□□□ -0.15
VCAN-205ENST00000503923 KCNA3P22001 575 aa14.1□□□□□ -0.15
VCAN-205ENST00000503923 SYNE4Q8N205 404 aa14.1□□□□□ -0.15
VCAN-205ENST00000503923 FRAT1Q92837 279 aaPredicted RBP14.1□□□□□ -0.15
VCAN-205ENST00000503923 PIM2Q9P1W9 311 aa14.1□□□□□ -0.15
VCAN-205ENST00000503923 RCAN3Q9UKA8 241 aa14.1□□□□□ -0.15
VCAN-205ENST00000503923 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
VCAN-205ENST00000503923 IRS4O14654 1257 aaPredicted RBP14.09□□□□□ -0.15
VCAN-205ENST00000503923 SRGNP10124 158 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
VCAN-205ENST00000503923 CRY2Q49AN0 593 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
VCAN-205ENST00000503923 ZKSCAN2Q63HK3 967 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 MASTLQ96GX5 879 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 COL11A2P13942 1736 aaPredicted RBP14.09□□□□□ -0.15
VCAN-205ENST00000503923 CDHR2Q9BYE9 1310 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 LAMB2P55268 1798 aa14.09□□□□□ -0.15
VCAN-205ENST00000503923 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
VCAN-205ENST00000503923 DDX60Q8IY21 1712 aaKnown RBP14.08□□□□□ -0.16
VCAN-205ENST00000503923 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
VCAN-205ENST00000503923 H7C1W4 665 aa14.08□□□□□ -0.16
VCAN-205ENST00000503923 TRIM27P14373 513 aa14.08□□□□□ -0.16
VCAN-205ENST00000503923 NPR1P16066 1061 aa14.08□□□□□ -0.16
VCAN-205ENST00000503923 CCT4P50991 539 aaKnown RBP14.08□□□□□ -0.16
VCAN-205ENST00000503923 STYK1Q6J9G0 422 aa14.08□□□□□ -0.16
VCAN-205ENST00000503923 ZNF622Q969S3 477 aaKnown RBP eCLIP14.08□□□□□ -0.16
VCAN-205ENST00000503923 GRM8O00222 908 aa14.07□□□□□ -0.16
VCAN-205ENST00000503923 DALRD3Q5D0E6 543 aaKnown RBP14.07□□□□□ -0.16
VCAN-205ENST00000503923 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
VCAN-205ENST00000503923 TTLL6Q8N841 843 aa14.07□□□□□ -0.16
VCAN-205ENST00000503923 JARID2Q92833 1246 aaPredicted RBP14.07□□□□□ -0.16
VCAN-205ENST00000503923 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
VCAN-205ENST00000503923 CNKSR1Q969H4 720 aa14.07□□□□□ -0.16
VCAN-205ENST00000503923 C9orf78Q9NZ63 289 aaPredicted RBP14.07□□□□□ -0.16
VCAN-205ENST00000503923 ABCC4O15439 1325 aa14.07□□□□□ -0.16
VCAN-205ENST00000503923 PDE8AO60658 829 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
VCAN-205ENST00000503923 CASP7P55210 303 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 SF3B3Q15393 1217 aaKnown RBP14.06□□□□□ -0.16
VCAN-205ENST00000503923 GPR162Q16538 588 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
VCAN-205ENST00000503923 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
VCAN-205ENST00000503923 WWC3Q9ULE0 1092 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
VCAN-205ENST00000503923 INTS3Q68E01 1043 aaKnown RBP14.05□□□□□ -0.16
VCAN-205ENST00000503923 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
VCAN-205ENST00000503923 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
VCAN-205ENST00000503923 CLUAP1Q96AJ1 413 aa14.04□□□□□ -0.16
VCAN-205ENST00000503923 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
VCAN-205ENST00000503923 UTYO14607 1347 aa14.04□□□□□ -0.16
VCAN-205ENST00000503923 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
VCAN-205ENST00000503923 MYH3P11055 1940 aa14.03□□□□□ -0.16
VCAN-205ENST00000503923 GRIN3BO60391 1043 aa14.03□□□□□ -0.16
VCAN-205ENST00000503923 MS4A1P11836 297 aa14.03□□□□□ -0.16
VCAN-205ENST00000503923 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
VCAN-205ENST00000503923 CTSWP56202 376 aa14.03□□□□□ -0.16
VCAN-205ENST00000503923 CCDC152Q4G0S7 254 aa14.03□□□□□ -0.16
VCAN-205ENST00000503923 PRPF40BQ6NWY9 871 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms