RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 KLRG2A4D1S0 409 aaPredicted RBP22.68■■□□□ 1.22
SMAD1-204ENST00000503324 YBX3P16989 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMAD1-204ENST00000503324 PDE6BP35913 854 aa22.68■■□□□ 1.22
SMAD1-204ENST00000503324 ALDH1L2Q3SY69 923 aa22.68■■□□□ 1.22
SMAD1-204ENST00000503324 DLEC1Q9Y238 1755 aa22.68■■□□□ 1.22
SMAD1-204ENST00000503324 TNRC6CQ9HCJ0 1690 aaKnown RBP22.68■■□□□ 1.22
SMAD1-204ENST00000503324 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
SMAD1-204ENST00000503324 GTF2E1P29083 439 aaPredicted RBP22.67■■□□□ 1.22
SMAD1-204ENST00000503324 C2CD5Q86YS7 1000 aa22.67■■□□□ 1.22
SMAD1-204ENST00000503324 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
SMAD1-204ENST00000503324 GOLGB1Q14789 3259 aaKnown RBP22.67■■□□□ 1.22
SMAD1-204ENST00000503324 IGKV5-2P06315 115 aa22.66■■□□□ 1.22
SMAD1-204ENST00000503324 BCL2L13Q9BXK5 485 aa22.66■■□□□ 1.22
SMAD1-204ENST00000503324 PDZRN3Q9UPQ7 1066 aa22.66■■□□□ 1.22
SMAD1-204ENST00000503324 H0YIN7 160 aa22.65■■□□□ 1.22
SMAD1-204ENST00000503324 SLC10A5Q5PT55 438 aa22.65■■□□□ 1.22
SMAD1-204ENST00000503324 SYNE4Q8N205 404 aa22.65■■□□□ 1.22
SMAD1-204ENST00000503324 DNAAF4Q8WXU2 420 aa22.65■■□□□ 1.22
SMAD1-204ENST00000503324 TRMT112Q9UI30 125 aaKnown RBP22.65■■□□□ 1.22
SMAD1-204ENST00000503324 SRGNP10124 158 aa22.64■■□□□ 1.21
SMAD1-204ENST00000503324 RARSP54136 660 aaKnown RBP22.64■■□□□ 1.21
SMAD1-204ENST00000503324 GPR162Q16538 588 aa22.64■■□□□ 1.21
SMAD1-204ENST00000503324 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.21
SMAD1-204ENST00000503324 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.21
SMAD1-204ENST00000503324 PIM2Q9P1W9 311 aa22.64■■□□□ 1.21
SMAD1-204ENST00000503324 SH3TC1Q8TE82 1336 aa22.63■■□□□ 1.21
SMAD1-204ENST00000503324 F6X3S4 739 aa22.63■■□□□ 1.21
SMAD1-204ENST00000503324 SMC4Q9NTJ3 1288 aa22.63■■□□□ 1.21
SMAD1-204ENST00000503324 CWF19L2Q2TBE0 894 aaKnown RBP22.62■■□□□ 1.21
SMAD1-204ENST00000503324 C3orf67Q6ZVT6 689 aa22.62■■□□□ 1.21
SMAD1-204ENST00000503324 CWC25Q9NXE8 425 aaPredicted RBP22.62■■□□□ 1.21
SMAD1-204ENST00000503324 DCAF8L1A6NGE4 600 aa22.61■■□□□ 1.21
SMAD1-204ENST00000503324 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
SMAD1-204ENST00000503324 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
SMAD1-204ENST00000503324 NEXNQ0ZGT2 675 aa22.61■■□□□ 1.21
SMAD1-204ENST00000503324 CRY2Q49AN0 593 aa22.61■■□□□ 1.21
SMAD1-204ENST00000503324 FAM89AQ96GI7 184 aa22.61■■□□□ 1.21
SMAD1-204ENST00000503324 PTPRCP08575 1304 aa22.6■■□□□ 1.21
SMAD1-204ENST00000503324 HCLS1P14317 486 aaPredicted RBP22.6■■□□□ 1.21
SMAD1-204ENST00000503324 DALRD3Q5D0E6 543 aaKnown RBP22.6■■□□□ 1.21
SMAD1-204ENST00000503324 STYK1Q6J9G0 422 aa22.6■■□□□ 1.21
SMAD1-204ENST00000503324 ZBTB38Q8NAP3 1195 aaPredicted RBP22.6■■□□□ 1.21
SMAD1-204ENST00000503324 MASTLQ96GX5 879 aa22.6■■□□□ 1.21
SMAD1-204ENST00000503324 BCS1LQ9Y276 419 aa22.6■■□□□ 1.21
SMAD1-204ENST00000503324 DDX60Q8IY21 1712 aaKnown RBP22.6■■□□□ 1.21
SMAD1-204ENST00000503324 PCCAP05165 728 aaPredicted RBP22.59■■□□□ 1.21
SMAD1-204ENST00000503324 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
SMAD1-204ENST00000503324 TTLL6Q8N841 843 aa22.59■■□□□ 1.21
SMAD1-204ENST00000503324 LINS1Q8NG48 757 aa22.59■■□□□ 1.21
SMAD1-204ENST00000503324 ZNF622Q969S3 477 aaKnown RBP eCLIP22.59■■□□□ 1.21
SMAD1-204ENST00000503324 NPR1P16066 1061 aa22.58■■□□□ 1.21
SMAD1-204ENST00000503324 RTL5Q5HYW3 569 aaPredicted RBP22.58■■□□□ 1.21
SMAD1-204ENST00000503324 UTRNP46939 3433 aa22.57■■□□□ 1.2
SMAD1-204ENST00000503324 ARFGEF1Q9Y6D6 1849 aa22.57■■□□□ 1.2
SMAD1-204ENST00000503324 NLRP3Q96P20 1036 aa22.57■■□□□ 1.2
SMAD1-204ENST00000503324 LAMB2P55268 1798 aa22.57■■□□□ 1.2
SMAD1-204ENST00000503324 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
SMAD1-204ENST00000503324 GRIN3BO60391 1043 aa22.56■■□□□ 1.2
SMAD1-204ENST00000503324 GCKRQ14397 625 aa22.56■■□□□ 1.2
SMAD1-204ENST00000503324 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
SMAD1-204ENST00000503324 HOXA10P31260 410 aaPredicted RBP22.55■■□□□ 1.2
SMAD1-204ENST00000503324 CNKSR1Q969H4 720 aa22.55■■□□□ 1.2
SMAD1-204ENST00000503324 NOB1Q9ULX3 412 aaKnown RBP22.55■■□□□ 1.2
SMAD1-204ENST00000503324 CDHR2Q9BYE9 1310 aa22.55■■□□□ 1.2
SMAD1-204ENST00000503324 H7C1W4 665 aa22.54■■□□□ 1.2
SMAD1-204ENST00000503324 BCAR3O75815 825 aa22.54■■□□□ 1.2
SMAD1-204ENST00000503324 PRPF40BQ6NWY9 871 aaKnown RBP22.54■■□□□ 1.2
SMAD1-204ENST00000503324 SLX4Q8IY92 1834 aa22.54■■□□□ 1.2
SMAD1-204ENST00000503324 CASP7P55210 303 aa22.53■■□□□ 1.2
SMAD1-204ENST00000503324 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
SMAD1-204ENST00000503324 RPGRQ92834 1020 aaKnown RBP22.53■■□□□ 1.2
SMAD1-204ENST00000503324 ALDH1L1O75891 902 aa22.52■■□□□ 1.2
SMAD1-204ENST00000503324 SF3B3Q15393 1217 aaKnown RBP22.52■■□□□ 1.2
SMAD1-204ENST00000503324 KIF16BQ96L93 1317 aa22.52■■□□□ 1.2
SMAD1-204ENST00000503324 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
SMAD1-204ENST00000503324 ALDH1B1P30837 517 aa22.51■■□□□ 1.19
SMAD1-204ENST00000503324 UBE3BQ7Z3V4 1068 aa22.51■■□□□ 1.19
SMAD1-204ENST00000503324 RBM17Q96I25 401 aaKnown RBP22.51■■□□□ 1.19
SMAD1-204ENST00000503324 CRAMP1Q96RY5 1269 aa22.51■■□□□ 1.19
SMAD1-204ENST00000503324 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
SMAD1-204ENST00000503324 C7orf43Q8WVR3 580 aa22.5■■□□□ 1.19
SMAD1-204ENST00000503324 ARHGAP45Q92619 1136 aa22.5■■□□□ 1.19
SMAD1-204ENST00000503324 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
SMAD1-204ENST00000503324 C21orf2O43822 256 aa22.49■■□□□ 1.19
SMAD1-204ENST00000503324 PDE8AO60658 829 aa22.49■■□□□ 1.19
SMAD1-204ENST00000503324 HSP90B1P14625 803 aaKnown RBP22.49■■□□□ 1.19
SMAD1-204ENST00000503324 API5Q9BZZ5 524 aaKnown RBP22.49■■□□□ 1.19
SMAD1-204ENST00000503324 ABCC4O15439 1325 aa22.49■■□□□ 1.19
SMAD1-204ENST00000503324 PLA2G12BQ9BX93 195 aa22.48■■□□□ 1.19
SMAD1-204ENST00000503324 COL4A1P02462 1669 aa22.47■■□□□ 1.19
SMAD1-204ENST00000503324 ARHGAP27Q6ZUM4 889 aa22.47■■□□□ 1.19
SMAD1-204ENST00000503324 ZNF219Q9P2Y4 722 aaPredicted RBP22.47■■□□□ 1.19
SMAD1-204ENST00000503324 GRM8O00222 908 aa22.46■■□□□ 1.19
SMAD1-204ENST00000503324 TRIM27P14373 513 aa22.45■■□□□ 1.18
SMAD1-204ENST00000503324 CTSWP56202 376 aa22.45■■□□□ 1.18
SMAD1-204ENST00000503324 OLFM4Q6UX06 510 aa22.45■■□□□ 1.18
SMAD1-204ENST00000503324 DDX46Q7L014 1031 aaKnown RBP22.45■■□□□ 1.18
SMAD1-204ENST00000503324 SLC51AQ86UW1 340 aa22.45■■□□□ 1.18
SMAD1-204ENST00000503324 FRAT1Q92837 279 aaPredicted RBP22.45■■□□□ 1.18
SMAD1-204ENST00000503324 TNNQ9UQP3 1299 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms