RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 PDCD2Q16342 344 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 TBC1D10BQ4KMP7 808 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 NOM1Q5C9Z4 860 aaKnown RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 AP1ARQ63HQ0 302 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 MORC1Q86VD1 984 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 FMNL3Q8IVF7 1028 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 SAMD3Q8N6K7 520 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 CEP89Q96ST8 783 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 MMTAG2Q9BU76 263 aaKnown RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 IQCGQ9H095 443 aaKnown RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 VEZTQ9HBM0 779 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 NOL7Q9UMY1 257 aaKnown RBP7.76□□□□□ -1.17
CLCN3-203ENST00000502998 MST1RQ04912 1400 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 SETD5Q9C0A6 1442 aa7.76□□□□□ -1.17
CLCN3-203ENST00000502998 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 ANKRD62A6NC57 917 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 TMCO5BA8MYB1 307 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 KIF5CO60282 957 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 KINO60870 393 aaKnown RBP7.75□□□□□ -1.17
CLCN3-203ENST00000502998 STK10O94804 968 aaKnown RBP7.75□□□□□ -1.17
CLCN3-203ENST00000502998 REC8O95072 547 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 RBM6P78332 1123 aaKnown RBP7.75□□□□□ -1.17
CLCN3-203ENST00000502998 RAD51AP2Q09MP3 1159 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 RABEP1Q15276 862 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 FILIP1LQ4L180 1135 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 ANKRD20A12PQ8NF67 263 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 SYAP1Q96A49 352 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-203ENST00000502998 FAM212AQ96EL1 285 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 C8orf37Q96NL8 207 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 OCEL1Q9H607 264 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 NALCNQ8IZF0 1738 aa7.75□□□□□ -1.17
CLCN3-203ENST00000502998 PPLO60437 1756 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 PNPLA6Q8IY17 1366 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 CBFA2T2O43439 604 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 MAP2K2P36507 400 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 RWDD2BP57060 319 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 IFT88Q13099 833 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 SYCP1Q15431 976 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 NUTM1Q86Y26 1132 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 ANKRD13BQ86YJ7 626 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 SMC5Q8IY18 1101 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 C17orf50Q8WW18 174 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 TATDN2Q93075 761 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 KIF2CQ99661 725 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 IRAK4Q9NWZ3 460 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
CLCN3-203ENST00000502998 ZNF232Q9UNY5 417 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 ADGRL3Q9HAR2 1447 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 NHSL1Q5SYE7 1610 aa7.74□□□□□ -1.17
CLCN3-203ENST00000502998 CREB3O43889 395 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 TNNT1P13805 278 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 HDLBPQ00341 1268 aaKnown RBP7.73□□□□□ -1.17
CLCN3-203ENST00000502998 NEUROD2Q15784 382 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 TRIM74Q86UV6 250 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 TRIM73Q86UV7 250 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 EFCAB13Q8IY85 973 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 MICAL1Q8TDZ2 1067 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 RMDN2Q96LZ7 410 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 AGBL1Q96MI9 1066 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 SH3GL3Q99963 347 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 RMI1Q9H9A7 625 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 GOPCQ9HD26 462 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 PCDHGA4Q9Y5G9 962 aa7.73□□□□□ -1.17
CLCN3-203ENST00000502998 ROBO2Q9HCK4 1378 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 PTCH1Q13635 1447 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 UNCXA6NJT0 531 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 CAND2O75155 1236 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 HMMRO75330 724 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 ADAMTS2O95450 1211 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 FAM163BP0C2L3 166 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 IMPDH2P12268 514 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 TMED1Q13445 227 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 MFSD4BQ5TF39 518 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 MCTP2Q6DN12 878 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 IQCF2Q8IXL9 164 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 RBM12BQ8IXT5 1001 aaKnown RBP7.72□□□□□ -1.17
CLCN3-203ENST00000502998 ZNF710Q8N1W2 664 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 SMCR8Q8TEV9 937 aaPredicted RBP7.72□□□□□ -1.17
CLCN3-203ENST00000502998 SLX1AQ9BQ83 275 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.72□□□□□ -1.17
CLCN3-203ENST00000502998 COMMD10Q9Y6G5 202 aa7.72□□□□□ -1.17
CLCN3-203ENST00000502998 MORC2Q9Y6X9 1032 aaPredicted RBP7.72□□□□□ -1.17
CLCN3-203ENST00000502998 PRAG1Q86YV5 1406 aa7.71□□□□□ -1.17
CLCN3-203ENST00000502998 C1orf167Q5SNV9 1468 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 PEX14O75381 377 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 CDKL5O76039 1030 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 NBPF7P0C2Y1 421 aaPredicted RBP7.71□□□□□ -1.18
CLCN3-203ENST00000502998 TRPC1P48995 793 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 APLP1P51693 650 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 INHBEP58166 350 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 KCNA1Q09470 495 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 CCDC30Q5VVM6 783 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 TTLL5Q6EMB2 1281 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 AMOTL1Q8IY63 956 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 ANKRD7Q92527 254 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 MPHOSPH9Q99550 1183 aa7.71□□□□□ -1.18
CLCN3-203ENST00000502998 CPSF2Q9P2I0 782 aaKnown RBP7.71□□□□□ -1.18
CLCN3-203ENST00000502998 ADGRF5Q8IZF2 1346 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms