RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 KLRG2A4D1S0 409 aaPredicted RBP32.05■■■□□ 2.72
LSM6-202ENST00000502781 PDE6BP35913 854 aa32.05■■■□□ 2.72
LSM6-202ENST00000502781 ERFEQ4G0M1 354 aa32.05■■■□□ 2.72
LSM6-202ENST00000502781 BCL2L13Q9BXK5 485 aa32.05■■■□□ 2.72
LSM6-202ENST00000502781 IGKV5-2P06315 115 aa32.04■■■□□ 2.72
LSM6-202ENST00000502781 GTF2E1P29083 439 aaPredicted RBP32.04■■■□□ 2.72
LSM6-202ENST00000502781 CCDC191Q8NCU4 936 aa32.04■■■□□ 2.72
LSM6-202ENST00000502781 SMC4Q9NTJ3 1288 aa32.04■■■□□ 2.72
LSM6-202ENST00000502781 PDZRN3Q9UPQ7 1066 aa32.04■■■□□ 2.72
LSM6-202ENST00000502781 CHRNA5P30532 468 aa32.03■■■□□ 2.72
LSM6-202ENST00000502781 SLC10A5Q5PT55 438 aa32.02■■■□□ 2.72
LSM6-202ENST00000502781 TRMT112Q9UI30 125 aaKnown RBP32.02■■■□□ 2.72
LSM6-202ENST00000502781 PTPRCP08575 1304 aa32.02■■■□□ 2.72
LSM6-202ENST00000502781 NEXNQ0ZGT2 675 aa32.01■■■□□ 2.71
LSM6-202ENST00000502781 N4BP2Q86UW6 1770 aaPredicted RBP32■■■□□ 2.71
LSM6-202ENST00000502781 F6X3S4 739 aa32■■■□□ 2.71
LSM6-202ENST00000502781 SH3TC1Q8TE82 1336 aa32■■■□□ 2.71
LSM6-202ENST00000502781 H0YIN7 160 aa31.99■■■□□ 2.71
LSM6-202ENST00000502781 C2CD5Q86YS7 1000 aa31.99■■■□□ 2.71
LSM6-202ENST00000502781 CWC25Q9NXE8 425 aaPredicted RBP31.99■■■□□ 2.71
LSM6-202ENST00000502781 NEURL1BA8MQ27 555 aa31.98■■■□□ 2.71
LSM6-202ENST00000502781 SYNE4Q8N205 404 aa31.98■■■□□ 2.71
LSM6-202ENST00000502781 LINS1Q8NG48 757 aa31.98■■■□□ 2.71
LSM6-202ENST00000502781 SRGNP10124 158 aa31.97■■■□□ 2.71
LSM6-202ENST00000502781 CRY2Q49AN0 593 aa31.97■■■□□ 2.71
LSM6-202ENST00000502781 PIM2Q9P1W9 311 aa31.97■■■□□ 2.71
LSM6-202ENST00000502781 CWF19L2Q2TBE0 894 aaKnown RBP31.96■■■□□ 2.71
LSM6-202ENST00000502781 BEND3Q5T5X7 828 aa31.96■■■□□ 2.71
LSM6-202ENST00000502781 ZBTB38Q8NAP3 1195 aaPredicted RBP31.96■■■□□ 2.71
LSM6-202ENST00000502781 FAM89AQ96GI7 184 aa31.96■■■□□ 2.71
LSM6-202ENST00000502781 BRCA1P38398 1863 aaKnown RBP31.96■■■□□ 2.71
LSM6-202ENST00000502781 TNRC6CQ9HCJ0 1690 aaKnown RBP31.95■■■□□ 2.7
LSM6-202ENST00000502781 PCCAP05165 728 aaPredicted RBP31.94■■■□□ 2.7
LSM6-202ENST00000502781 YBX3P16989 372 aaKnown RBP eCLIP31.94■■■□□ 2.73e-6■□□□□ 8.1
LSM6-202ENST00000502781 COL11A2P13942 1736 aaPredicted RBP31.94■■■□□ 2.7
LSM6-202ENST00000502781 DLEC1Q9Y238 1755 aa31.94■■■□□ 2.7
LSM6-202ENST00000502781 C3orf67Q6ZVT6 689 aa31.93■■■□□ 2.7
LSM6-202ENST00000502781 MASTLQ96GX5 879 aa31.93■■■□□ 2.7
LSM6-202ENST00000502781 NOB1Q9ULX3 412 aaKnown RBP31.93■■■□□ 2.7
LSM6-202ENST00000502781 KIF16BQ96L93 1317 aa31.92■■■□□ 2.7
LSM6-202ENST00000502781 BCAR3O75815 825 aa31.92■■■□□ 2.7
LSM6-202ENST00000502781 GCKRQ14397 625 aa31.92■■■□□ 2.7
LSM6-202ENST00000502781 STYK1Q6J9G0 422 aa31.92■■■□□ 2.7
LSM6-202ENST00000502781 HCLS1P14317 486 aaPredicted RBP31.91■■■□□ 2.7
LSM6-202ENST00000502781 GPR162Q16538 588 aa31.91■■■□□ 2.7
LSM6-202ENST00000502781 NLRP3Q96P20 1036 aa31.91■■■□□ 2.7
LSM6-202ENST00000502781 WWC3Q9ULE0 1092 aa31.91■■■□□ 2.7
LSM6-202ENST00000502781 NPR1P16066 1061 aa31.9■■■□□ 2.7
LSM6-202ENST00000502781 DALRD3Q5D0E6 543 aaKnown RBP31.9■■■□□ 2.7
LSM6-202ENST00000502781 ARHGAP45Q92619 1136 aa31.9■■■□□ 2.7
LSM6-202ENST00000502781 YTHDC1Q96MU7 727 aaKnown RBP31.9■■■□□ 2.7
LSM6-202ENST00000502781 CDHR2Q9BYE9 1310 aa31.89■■■□□ 2.7
LSM6-202ENST00000502781 H7C1W4 665 aa31.89■■■□□ 2.7
LSM6-202ENST00000502781 IRS4O14654 1257 aaPredicted RBP31.89■■■□□ 2.7
LSM6-202ENST00000502781 HOXA10P31260 410 aaPredicted RBP31.89■■■□□ 2.7
LSM6-202ENST00000502781 TTLL6Q8N841 843 aa31.89■■■□□ 2.7
LSM6-202ENST00000502781 BCS1LQ9Y276 419 aa31.89■■■□□ 2.7
LSM6-202ENST00000502781 DCAF8L1A6NGE4 600 aa31.88■■■□□ 2.69
LSM6-202ENST00000502781 ALDH1L1O75891 902 aa31.88■■■□□ 2.69
LSM6-202ENST00000502781 RTL5Q5HYW3 569 aaPredicted RBP31.88■■■□□ 2.69
LSM6-202ENST00000502781 SLC4A10Q6U841 1118 aa31.88■■■□□ 2.69
LSM6-202ENST00000502781 PELP1Q8IZL8 1130 aaKnown RBP31.88■■■□□ 2.69
LSM6-202ENST00000502781 ZNF622Q969S3 477 aaKnown RBP eCLIP31.88■■■□□ 2.69
LSM6-202ENST00000502781 GOLGB1Q14789 3259 aaKnown RBP31.88■■■□□ 2.69
LSM6-202ENST00000502781 CNKSR1Q969H4 720 aa31.87■■■□□ 2.69
LSM6-202ENST00000502781 SRCIN1Q9C0H9 1055 aa31.87■■■□□ 2.69
LSM6-202ENST00000502781 API5Q9BZZ5 524 aaKnown RBP31.86■■■□□ 2.69
LSM6-202ENST00000502781 DDX60Q8IY21 1712 aaKnown RBP31.86■■■□□ 2.69
LSM6-202ENST00000502781 GRIN3BO60391 1043 aa31.85■■■□□ 2.69
LSM6-202ENST00000502781 CASP7P55210 303 aa31.85■■■□□ 2.69
LSM6-202ENST00000502781 JARID2Q92833 1246 aaPredicted RBP31.85■■■□□ 2.69
LSM6-202ENST00000502781 HSP90B1P14625 803 aaKnown RBP31.84■■■□□ 2.69
LSM6-202ENST00000502781 SF3B3Q15393 1217 aaKnown RBP31.84■■■□□ 2.69
LSM6-202ENST00000502781 LAMB2P55268 1798 aa31.82■■■□□ 2.69
LSM6-202ENST00000502781 IPO8O15397 1037 aaKnown RBP31.82■■■□□ 2.69
LSM6-202ENST00000502781 UBE3BQ7Z3V4 1068 aa31.82■■■□□ 2.69
LSM6-202ENST00000502781 RPGRQ92834 1020 aaKnown RBP31.82■■■□□ 2.69
LSM6-202ENST00000502781 CRAMP1Q96RY5 1269 aa31.82■■■□□ 2.69
LSM6-202ENST00000502781 PDE8AO60658 829 aa31.81■■■□□ 2.68
LSM6-202ENST00000502781 ALDH1B1P30837 517 aa31.81■■■□□ 2.68
LSM6-202ENST00000502781 UTRNP46939 3433 aa31.81■■■□□ 2.68
LSM6-202ENST00000502781 PRPF40BQ6NWY9 871 aaKnown RBP31.81■■■□□ 2.68
LSM6-202ENST00000502781 PLA2G12BQ9BX93 195 aa31.81■■■□□ 2.68
LSM6-202ENST00000502781 ARFGEF1Q9Y6D6 1849 aa31.8■■■□□ 2.68
LSM6-202ENST00000502781 GRM8O00222 908 aa31.8■■■□□ 2.68
LSM6-202ENST00000502781 TRIM27P14373 513 aa31.8■■■□□ 2.68
LSM6-202ENST00000502781 ATF7IPQ6VMQ6 1270 aa31.8■■■□□ 2.68
LSM6-202ENST00000502781 C7orf43Q8WVR3 580 aa31.8■■■□□ 2.68
LSM6-202ENST00000502781 RBM17Q96I25 401 aaKnown RBP31.8■■■□□ 2.68
LSM6-202ENST00000502781 ABCC4O15439 1325 aa31.79■■■□□ 2.68
LSM6-202ENST00000502781 FRAT1Q92837 279 aaPredicted RBP31.78■■■□□ 2.68
LSM6-202ENST00000502781 SLX4Q8IY92 1834 aa31.78■■■□□ 2.68
LSM6-202ENST00000502781 UTYO14607 1347 aa31.77■■■□□ 2.68
LSM6-202ENST00000502781 CCT4P50991 539 aaKnown RBP31.77■■■□□ 2.68
LSM6-202ENST00000502781 ZKSCAN2Q63HK3 967 aa31.76■■■□□ 2.67
LSM6-202ENST00000502781 RCAN3Q9UKA8 241 aa31.76■■■□□ 2.67
LSM6-202ENST00000502781 CTSWP56202 376 aa31.75■■■□□ 2.67
LSM6-202ENST00000502781 C9orf78Q9NZ63 289 aaPredicted RBP31.75■■■□□ 2.67
LSM6-202ENST00000502781 INTS3Q68E01 1043 aaKnown RBP31.74■■■□□ 2.67
LSM6-202ENST00000502781 TNNQ9UQP3 1299 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms