RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 A0A087WZG4 1122 aa17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 PPP1R9BQ96SB3 815 aa17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 USP25Q9UHP3 1055 aa17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 SASH1O94885 1247 aa17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 CREB3L3Q68CJ9 461 aa17.93■□□□□ 0.46
SH3TC1-206ENST00000502669 GIMAP6Q6P9H5 292 aa17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 F13A1P00488 732 aa17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 PSMA5P28066 241 aa17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 ARHGAP23Q9P227 1491 aa17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.92■□□□□ 0.46
SH3TC1-206ENST00000502669 DDX46Q7L014 1031 aaKnown RBP17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 HIP1O00291 1037 aa17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 ZNF830Q96NB3 372 aaPredicted RBP17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 LRRC2Q9BYS8 371 aa17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 SLIT1O75093 1534 aa17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 TOPAZ1Q8N9V7 1692 aa17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 DDX11Q96FC9 970 aa17.91■□□□□ 0.46
SH3TC1-206ENST00000502669 CEBPZQ03701 1054 aaKnown RBP17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 CAMK4Q16566 473 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 CSPP1Q1MSJ5 1256 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 EPHA10Q5JZY3 1008 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 RGPD1P0DJD0 1748 aa17.9■□□□□ 0.46
SH3TC1-206ENST00000502669 H3BQV1 296 aa17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 TFCP2Q12800 502 aa17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 ME3Q16798 604 aa17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 IFFO2Q5TF58 517 aa17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 CCDC129Q6ZRS4 1044 aa17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 ZSCAN31Q96LW9 406 aaPredicted RBP17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 SLC52A2Q9HAB3 445 aa17.89■□□□□ 0.46
SH3TC1-206ENST00000502669 CCDC183Q5T5S1 534 aa17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 GORABQ5T7V8 394 aa17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 FMN2Q9NZ56 1722 aa17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 NEURL1BA8MQ27 555 aa17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 RBM10P98175 930 aaKnown RBP17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 GCKRQ14397 625 aa17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.89■□□□□ 0.45
SH3TC1-206ENST00000502669 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 ZBTB3Q9H5J0 574 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 PXDNQ92626 1479 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 SNRPA1P09661 255 aaKnown RBP17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 NPHP3Q7Z494 1330 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 SLC27A2O14975 620 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 VPS53Q5VIR6 699 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 FAM184AQ8NB25 1140 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 TTC14Q96N46 770 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 SH2B1Q9NRF2 756 aaPredicted RBP17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 ERBB3P21860 1342 aa17.88■□□□□ 0.45
SH3TC1-206ENST00000502669 UBE2HP62256 183 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 LMBR1LQ6UX01 489 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 NALCNQ8IZF0 1738 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 CHGBP05060 677 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 BICD2Q8TD16 824 aa17.87■□□□□ 0.45
SH3TC1-206ENST00000502669 SPC24Q8NBT2 197 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 STRN4Q9NRL3 753 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 TPCN1Q9ULQ1 816 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 ZNF589Q86UQ0 364 aaPredicted RBP17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 KAZALD1Q96I82 304 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 SEC62Q99442 399 aaKnown RBP17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 DBNDD2Q9BQY9 259 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 C19orf44Q9H6X5 657 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 KRT85P78386 507 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 MTX1Q13505 466 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 DRC7Q8IY82 874 aa17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 METTL22Q9BUU2 404 aaPredicted RBP17.86■□□□□ 0.45
SH3TC1-206ENST00000502669 PHKG2P15735 406 aa17.85■□□□□ 0.45
SH3TC1-206ENST00000502669 PXDNLA1KZ92 1463 aa17.85■□□□□ 0.45
SH3TC1-206ENST00000502669 TAF7LQ5H9L4 462 aa17.85■□□□□ 0.45
SH3TC1-206ENST00000502669 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
SH3TC1-206ENST00000502669 TAF6LQ9Y6J9 622 aa17.85■□□□□ 0.45
SH3TC1-206ENST00000502669 ADGRL3Q9HAR2 1447 aa17.85■□□□□ 0.45
SH3TC1-206ENST00000502669 GOLIM4O00461 696 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 CKAP2LQ8IYA6 745 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 ZSWIM6Q9HCJ5 1215 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 MTMR6Q9Y217 621 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 CDC37L1Q7L3B6 337 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 ZKSCAN5Q9Y2L8 839 aa17.84■□□□□ 0.45
SH3TC1-206ENST00000502669 ADCY5O95622 1261 aa17.83■□□□□ 0.45
SH3TC1-206ENST00000502669 PDCP20941 246 aa17.83■□□□□ 0.45
SH3TC1-206ENST00000502669 TIMM10P62072 90 aa17.83■□□□□ 0.44
SH3TC1-206ENST00000502669 NECTIN1Q15223 517 aa17.83■□□□□ 0.44
SH3TC1-206ENST00000502669 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.44
SH3TC1-206ENST00000502669 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.44
SH3TC1-206ENST00000502669 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
SH3TC1-206ENST00000502669 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.448e-7■■■□□ 16.6
SH3TC1-206ENST00000502669 TTC12Q9H892 705 aaPredicted RBP17.82■□□□□ 0.44
SH3TC1-206ENST00000502669 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
SH3TC1-206ENST00000502669 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms