RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 ADCK5Q3MIX3 580 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 SUCLG2Q96I99 432 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 CCDC39Q9UFE4 941 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 CNPY2Q9Y2B0 182 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 LARGE1O95461 756 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 F13A1P00488 732 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 PRPF40BQ6NWY9 871 aaKnown RBP27.63■■■□□ 2.01
SNF8-202ENST00000502492 ZSCAN31Q96LW9 406 aaPredicted RBP27.63■■■□□ 2.01
SNF8-202ENST00000502492 JAKMIP1Q96N16 626 aaKnown RBP27.63■■■□□ 2.01
SNF8-202ENST00000502492 PDRG1Q9NUG6 133 aa27.63■■■□□ 2.01
SNF8-202ENST00000502492 SASH1O94885 1247 aa27.62■■■□□ 2.01
SNF8-202ENST00000502492 DDX58O95786 925 aaKnown RBP27.62■■■□□ 2.01
SNF8-202ENST00000502492 SH2B1Q9NRF2 756 aaPredicted RBP27.62■■■□□ 2.01
SNF8-202ENST00000502492 ATP6V1DQ9Y5K8 247 aa27.62■■■□□ 2.01
SNF8-202ENST00000502492 ABCA3Q99758 1704 aa27.62■■■□□ 2.01
SNF8-202ENST00000502492 CCDC171Q6TFL3 1326 aa27.61■■■□□ 2.01
SNF8-202ENST00000502492 PDIA6Q15084 440 aa27.61■■■□□ 2.01
SNF8-202ENST00000502492 SNRKQ9NRH2 765 aa27.61■■■□□ 2.01
SNF8-202ENST00000502492 AXIN2Q9Y2T1 843 aa27.61■■■□□ 2.01
SNF8-202ENST00000502492 CYP46A1Q9Y6A2 500 aa27.61■■■□□ 2.01
SNF8-202ENST00000502492 COL22A1Q8NFW1 1626 aaPredicted RBP27.61■■■□□ 2.01
SNF8-202ENST00000502492 BICC1Q9H694 974 aaKnown RBP27.61■■■□□ 2.01
SNF8-202ENST00000502492 HIP1O00291 1037 aa27.6■■■□□ 2.01
SNF8-202ENST00000502492 UBE2HP62256 183 aa27.6■■■□□ 2.01
SNF8-202ENST00000502492 CCDC183Q5T5S1 534 aa27.6■■■□□ 2.01
SNF8-202ENST00000502492 FAM184AQ8NB25 1140 aa27.6■■■□□ 2.01
SNF8-202ENST00000502492 EAF2Q96CJ1 260 aaPredicted RBP27.6■■■□□ 2.01
SNF8-202ENST00000502492 TERF1P54274 439 aa27.59■■■□□ 2.01
SNF8-202ENST00000502492 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.59■■■□□ 2.01
SNF8-202ENST00000502492 G3BP1Q13283 466 aaKnown RBP eCLIP27.59■■■□□ 2.01
SNF8-202ENST00000502492 MAP4K1Q92918 833 aa27.58■■■□□ 2.01
SNF8-202ENST00000502492 CCDC83Q8IWF9 413 aa27.58■■■□□ 2.01
SNF8-202ENST00000502492 LETM1O95202 739 aaPredicted RBP27.57■■■□□ 2
SNF8-202ENST00000502492 ZKSCAN1P17029 563 aaPredicted RBP27.57■■■□□ 2
SNF8-202ENST00000502492 GJB2P29033 226 aa27.57■■■□□ 2
SNF8-202ENST00000502492 UVSSAQ2YD98 709 aa27.57■■■□□ 2
SNF8-202ENST00000502492 IGKV5-2P06315 115 aa27.57■■■□□ 2
SNF8-202ENST00000502492 CHRNA2Q15822 529 aa27.57■■■□□ 2
SNF8-202ENST00000502492 RBM8AQ9Y5S9 174 aaKnown RBP27.57■■■□□ 2
SNF8-202ENST00000502492 CREB3L3Q68CJ9 461 aa27.56■■■□□ 2
SNF8-202ENST00000502492 KLHL34Q8N239 644 aa27.56■■■□□ 2
SNF8-202ENST00000502492 MTMR6Q9Y217 621 aa27.56■■■□□ 2
SNF8-202ENST00000502492 RRP9O43818 475 aaKnown RBP27.56■■■□□ 2
SNF8-202ENST00000502492 ST3GAL1Q11201 340 aa27.56■■■□□ 2
SNF8-202ENST00000502492 FAM227BQ96M60 508 aa27.56■■■□□ 2
SNF8-202ENST00000502492 PRDM11Q9NQV5 511 aa27.56■■■□□ 2
SNF8-202ENST00000502492 AIMP1Q12904 312 aaKnown RBP27.55■■■□□ 2
SNF8-202ENST00000502492 NMIQ13287 307 aaPredicted RBP27.55■■■□□ 2
SNF8-202ENST00000502492 ABCC6O95255 1503 aa27.55■■■□□ 2
SNF8-202ENST00000502492 CCDC8Q9H0W5 538 aaPredicted RBP27.55■■■□□ 2
SNF8-202ENST00000502492 ME3Q16798 604 aa27.54■■■□□ 2
SNF8-202ENST00000502492 LARP1Q6PKG0 1096 aaKnown RBP27.54■■■□□ 2
SNF8-202ENST00000502492 COL18A1P39060 1754 aa27.54■■■□□ 2
SNF8-202ENST00000502492 ZNF790Q6PG37 636 aa27.53■■■□□ 2
SNF8-202ENST00000502492 MRC1P22897 1456 aa27.53■■■□□ 2
SNF8-202ENST00000502492 ERBB3P21860 1342 aa27.53■■■□□ 2
SNF8-202ENST00000502492 TLR7Q9NYK1 1049 aaKnown RBP27.53■■■□□ 2
SNF8-202ENST00000502492 PRKCSHP14314 528 aaPredicted RBP27.52■■■□□ 2
SNF8-202ENST00000502492 CSPP1Q1MSJ5 1256 aa27.52■■■□□ 2
SNF8-202ENST00000502492 RIC3Q7Z5B4 369 aa27.52■■■□□ 2
SNF8-202ENST00000502492 NEURL1BA8MQ27 555 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 FIBPO43427 364 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 UBE2Q2Q8WVN8 375 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 SLC27A2O14975 620 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 PSMA5P28066 241 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 HSP90AA2PQ14568 343 aaPredicted RBP27.51■■□□□ 1.99
SNF8-202ENST00000502492 SLC52A2Q9HAB3 445 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 TPCN1Q9ULQ1 816 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 JCADQ9P266 1359 aa27.51■■□□□ 1.99
SNF8-202ENST00000502492 RGPD5Q99666 1765 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 MED23Q9ULK4 1368 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 A0A0D9SFI3 127 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 PDIA4P13667 645 aaKnown RBP27.5■■□□□ 1.99
SNF8-202ENST00000502492 HSPA1LP34931 641 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 KCNJ4P48050 445 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 DNM1Q05193 864 aaKnown RBP27.5■■□□□ 1.99
SNF8-202ENST00000502492 NEXNQ0ZGT2 675 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 GCKRQ14397 625 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 C5P01031 1676 aa27.5■■□□□ 1.99
SNF8-202ENST00000502492 SLC39A6Q13433 755 aa27.49■■□□□ 1.99
SNF8-202ENST00000502492 BOLA2Q9H3K6 86 aa27.49■■□□□ 1.99
SNF8-202ENST00000502492 SCN11AQ9UI33 1791 aa27.49■■□□□ 1.99
SNF8-202ENST00000502492 KDM6AO15550 1401 aaPredicted RBP27.49■■□□□ 1.99
SNF8-202ENST00000502492 SIL1Q9H173 461 aa27.49■■□□□ 1.99
SNF8-202ENST00000502492 ALDH8A1Q9H2A2 487 aaPredicted RBP27.49■■□□□ 1.99
SNF8-202ENST00000502492 DDX54Q8TDD1 881 aaKnown RBP27.48■■□□□ 1.99
SNF8-202ENST00000502492 FSD1Q9BTV5 496 aa27.48■■□□□ 1.99
SNF8-202ENST00000502492 METTL22Q9BUU2 404 aaPredicted RBP27.48■■□□□ 1.99
SNF8-202ENST00000502492 NECAB1Q8N987 351 aa27.47■■□□□ 1.99
SNF8-202ENST00000502492 RNF20Q5VTR2 975 aa27.47■■□□□ 1.99
SNF8-202ENST00000502492 XAGE3Q8WTP9 111 aa27.47■■□□□ 1.99
SNF8-202ENST00000502492 FUCA2Q9BTY2 467 aa27.47■■□□□ 1.99
SNF8-202ENST00000502492 EPHA10Q5JZY3 1008 aa27.46■■□□□ 1.99
SNF8-202ENST00000502492 KLHDC4Q8TBB5 520 aa27.46■■□□□ 1.99
SNF8-202ENST00000502492 PTMAP06454 111 aaKnown RBP27.46■■□□□ 1.99
SNF8-202ENST00000502492 RAPGEF4Q8WZA2 1011 aa27.46■■□□□ 1.99
SNF8-202ENST00000502492 MYL6BP14649 208 aa27.45■■□□□ 1.99
SNF8-202ENST00000502492 ANKRD1Q15327 319 aa27.45■■□□□ 1.99
SNF8-202ENST00000502492 TSGA10IPQ3SY00 556 aa27.45■■□□□ 1.99
SNF8-202ENST00000502492 COPS6Q7L5N1 327 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms