RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 SLC39A7Q92504 469 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 AVENQ9NQS1 362 aaPredicted RBP4.69□□□□□ -1.66
SUB1-202ENST00000502453 SCINQ9Y6U3 715 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 SHTN1A0MZ66 631 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 DHX16O60231 1041 aaKnown RBP4.69□□□□□ -1.66
SUB1-202ENST00000502453 NOS2P35228 1153 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 ARMCX6Q7L4S7 300 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 PTPRHQ9HD43 1115 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 ST7Q9NRC1 585 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 SPG7Q9UQ90 795 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 FRMD4BQ9Y2L6 1034 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 PRSS12P56730 875 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 NFX1Q12986 1120 aaKnown RBP4.69□□□□□ -1.66
SUB1-202ENST00000502453 MEI1Q5TIA1 1274 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 QTRT2Q9H974 415 aaKnown RBP4.69□□□□□ -1.66
SUB1-202ENST00000502453 SIRPGQ9P1W8 387 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 NOB1Q9ULX3 412 aaKnown RBP4.69□□□□□ -1.66
SUB1-202ENST00000502453 DAAM1Q9Y4D1 1078 aa4.69□□□□□ -1.66
SUB1-202ENST00000502453 CCDC180Q9P1Z9 1646 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 SLC34A2O95436 690 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 GJA8P48165 433 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 POU5F1Q01860 360 aaKnown RBP4.68□□□□□ -1.66
SUB1-202ENST00000502453 RASA3Q14644 834 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 NUDT18Q6ZVK8 323 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 SAMD3Q8N6K7 520 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 MYRIPQ8NFW9 859 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 TSPAN18Q96SJ8 248 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 COPRSQ9NQ92 184 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 TBX3O15119 743 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 EIF1AXP47813 144 aaKnown RBP4.68□□□□□ -1.66
SUB1-202ENST00000502453 TRAPPC10P48553 1259 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 PPM1FP49593 454 aaPredicted RBP4.68□□□□□ -1.66
SUB1-202ENST00000502453 NBPF6Q5VWK0 638 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 MYO1HQ8N1T3 1032 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 TTC30BQ8N4P2 665 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 CPLX3Q8WVH0 158 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 NBPF4Q96M43 638 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 HDAC9Q9UKV0 1011 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 LEMD3Q9Y2U8 911 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 SMAPO00193 183 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 ZBTB7BO15156 539 aaPredicted RBP4.68□□□□□ -1.66
SUB1-202ENST00000502453 SLC26A4O43511 780 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 USP46P62068 366 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 GRAMD1BQ3KR37 738 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 HDGFL2Q7Z4V5 671 aaPredicted RBP4.68□□□□□ -1.66
SUB1-202ENST00000502453 CDC5LQ99459 802 aaKnown RBP4.68□□□□□ -1.66
SUB1-202ENST00000502453 EFR3BQ9Y2G0 817 aa4.68□□□□□ -1.66
SUB1-202ENST00000502453 DNAJB2P25686 324 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 KCTD2Q14681 263 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 NBPF20Q3BBV1 942 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 ARSHQ5FYA8 562 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 DMRTB1Q96MA1 342 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 ZIM2Q9NZV7 527 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 CNTN3Q9P232 1028 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 PTCD1O75127 700 aaKnown RBP4.67□□□□□ -1.66
SUB1-202ENST00000502453 TRIM37O94972 964 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 ANO1Q5XXA6 986 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 ZNF454Q8N9F8 522 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 ENOX1Q8TC92 643 aaKnown RBP4.67□□□□□ -1.66
SUB1-202ENST00000502453 MKL1Q969V6 931 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 MRPS23Q9Y3D9 190 aaKnown RBP4.67□□□□□ -1.66
SUB1-202ENST00000502453 RPGRIP1LQ68CZ1 1315 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 FGAP02671 866 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 IFIT2P09913 472 aaKnown RBP4.67□□□□□ -1.66
SUB1-202ENST00000502453 FAM160A1Q05DH4 1040 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 RAB33AQ14088 237 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 TOMM20Q15388 145 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 NFE2Q16621 373 aaPredicted RBP4.67□□□□□ -1.66
SUB1-202ENST00000502453 DALRD3Q5D0E6 543 aaKnown RBP4.67□□□□□ -1.66
SUB1-202ENST00000502453 GPR153Q6NV75 609 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 CCDC174Q6PII3 467 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 FEZ1Q99689 392 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 FKBPLQ9UIM3 349 aa4.67□□□□□ -1.66
SUB1-202ENST00000502453 VIL1P09327 827 aaKnown RBP4.66□□□□□ -1.66
SUB1-202ENST00000502453 RRM1P23921 792 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 RAB27AP51159 221 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 IFRD2Q12894 506 aaPredicted RBP4.66□□□□□ -1.66
SUB1-202ENST00000502453 PCGF5Q86SE9 256 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 ATCAYQ86WG3 371 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 SIX5Q8N196 739 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 TTC13Q8NBP0 860 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 SAP130Q9H0E3 1048 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 DOLKQ9UPQ8 538 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 GCGRP47871 477 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 EFCAB2Q5VUJ9 269 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 ALG1LQ6GMV1 187 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 KIAA0907Q7Z7F0 614 aaPredicted RBP4.66□□□□□ -1.66
SUB1-202ENST00000502453 DDX42Q86XP3 938 aaKnown RBP eCLIP4.66□□□□□ -1.66
SUB1-202ENST00000502453 E2F7Q96AV8 911 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 LRRC27Q9C0I9 530 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 RBSNQ9H1K0 784 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 ANAPC4Q9UJX5 808 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 MAN1A1P33908 653 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 C16orf86Q6ZW13 317 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 DRC7Q8IY82 874 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 EMID1Q96A84 441 aaPredicted RBP4.66□□□□□ -1.66
SUB1-202ENST00000502453 TIMM44O43615 452 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 KATNA1O75449 491 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 DKK1O94907 266 aa4.66□□□□□ -1.66
SUB1-202ENST00000502453 CHPFQ8IZ52 775 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms