RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 RTKN2Q8IZC4 609 aa28.88■■■□□ 2.21
SDHA-202ENST00000502379 ZNF277Q9NRM2 450 aaPredicted RBP28.88■■■□□ 2.21
SDHA-202ENST00000502379 CHPF2Q9P2E5 772 aa28.88■■■□□ 2.21
SDHA-202ENST00000502379 CCDC184Q52MB2 194 aa28.87■■■□□ 2.21
SDHA-202ENST00000502379 RPGRQ92834 1020 aaKnown RBP28.87■■■□□ 2.21
SDHA-202ENST00000502379 UTP14AQ9BVJ6 771 aaKnown RBP28.87■■■□□ 2.21
SDHA-202ENST00000502379 MBIPQ9NS73 344 aa28.87■■■□□ 2.21
SDHA-202ENST00000502379 RIC1Q4ADV7 1423 aa28.86■■■□□ 2.21
SDHA-202ENST00000502379 ZNF853P0CG23 659 aa28.86■■■□□ 2.21
SDHA-202ENST00000502379 ZEB1P37275 1124 aaPredicted RBP28.86■■■□□ 2.21
SDHA-202ENST00000502379 HDGFL1Q5TGJ6 251 aa28.86■■■□□ 2.21
SDHA-202ENST00000502379 DDNO94850 711 aaPredicted RBP28.85■■■□□ 2.21
SDHA-202ENST00000502379 SMC1BQ8NDV3 1235 aa28.85■■■□□ 2.21
SDHA-202ENST00000502379 HOXB7P09629 217 aa28.84■■■□□ 2.21
SDHA-202ENST00000502379 SLC10A5Q5PT55 438 aa28.84■■■□□ 2.21
SDHA-202ENST00000502379 DUSP27Q5VZP5 1158 aa28.84■■■□□ 2.21
SDHA-202ENST00000502379 DNAJC5GQ8N7S2 189 aa28.84■■■□□ 2.21
SDHA-202ENST00000502379 HTRA3P83110 453 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 TCIRG1Q13488 830 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 HSP90AB3PQ58FF7 597 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 SLC51AQ86UW1 340 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 NLRP10Q86W26 655 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 SYNE4Q8N205 404 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 RBM17Q96I25 401 aaKnown RBP28.83■■■□□ 2.21
SDHA-202ENST00000502379 WDR90Q96KV7 1748 aa28.83■■■□□ 2.21
SDHA-202ENST00000502379 NLRP3Q96P20 1036 aa28.82■■■□□ 2.2
SDHA-202ENST00000502379 CRAMP1Q96RY5 1269 aa28.82■■■□□ 2.2
SDHA-202ENST00000502379 SNED1Q8TER0 1413 aa28.82■■■□□ 2.2
SDHA-202ENST00000502379 DBF4Q9UBU7 674 aaPredicted RBP28.81■■■□□ 2.2
SDHA-202ENST00000502379 IFT57Q9NWB7 429 aa28.8■■■□□ 2.2
SDHA-202ENST00000502379 TCERG1O14776 1098 aaKnown RBP28.79■■■□□ 2.2
SDHA-202ENST00000502379 IARSP41252 1262 aaKnown RBP28.79■■■□□ 2.2
SDHA-202ENST00000502379 CC2D2BQ6DHV5 1058 aa28.79■■■□□ 2.2
SDHA-202ENST00000502379 ZNF428Q96B54 188 aa28.79■■■□□ 2.2
SDHA-202ENST00000502379 HCLS1P14317 486 aaPredicted RBP28.78■■■□□ 2.2
SDHA-202ENST00000502379 GNAI1P63096 354 aa28.78■■■□□ 2.2
SDHA-202ENST00000502379 ANKRD13DQ6ZTN6 518 aa28.78■■■□□ 2.2
SDHA-202ENST00000502379 PLBD2Q8NHP8 589 aa28.78■■■□□ 2.2
SDHA-202ENST00000502379 PSMD1Q99460 953 aa28.78■■■□□ 2.2
SDHA-202ENST00000502379 ZNF541Q9H0D2 1346 aa28.77■■■□□ 2.2
SDHA-202ENST00000502379 PPEF1O14829 653 aaPredicted RBP28.77■■■□□ 2.2
SDHA-202ENST00000502379 CALD1Q05682 793 aaKnown RBP28.77■■■□□ 2.2
SDHA-202ENST00000502379 TRMT112Q9UI30 125 aaKnown RBP28.77■■■□□ 2.2
SDHA-202ENST00000502379 RNF123Q5XPI4 1314 aa28.76■■■□□ 2.19
SDHA-202ENST00000502379 ELL2O00472 640 aaPredicted RBP28.76■■■□□ 2.19
SDHA-202ENST00000502379 HYPKQ9NX55 129 aa28.76■■■□□ 2.19
SDHA-202ENST00000502379 SH3TC1Q8TE82 1336 aa28.74■■■□□ 2.19
SDHA-202ENST00000502379 FZD9O00144 591 aa28.74■■■□□ 2.19
SDHA-202ENST00000502379 C8orf58Q8NAV2 365 aa28.74■■■□□ 2.19
SDHA-202ENST00000502379 L3MBTL3Q96JM7 780 aaPredicted RBP28.74■■■□□ 2.19
SDHA-202ENST00000502379 ANKRD36CQ5JPF3 1778 aa28.74■■■□□ 2.19
SDHA-202ENST00000502379 ABCC4O15439 1325 aa28.73■■■□□ 2.19
SDHA-202ENST00000502379 ZNF316A6NFI3 1004 aaPredicted RBP28.73■■■□□ 2.19
SDHA-202ENST00000502379 POTEIP0CG38 1075 aa28.73■■■□□ 2.19
SDHA-202ENST00000502379 POTEJP0CG39 1038 aa28.73■■■□□ 2.19
SDHA-202ENST00000502379 ISCA1Q9BUE6 129 aa28.73■■■□□ 2.19
SDHA-202ENST00000502379 ATP5J2-PTCD1G3V325 749 aa28.72■■■□□ 2.19
SDHA-202ENST00000502379 GRIPAP1Q4V328 841 aa28.72■■■□□ 2.19
SDHA-202ENST00000502379 ATP6V0A2Q9Y487 856 aa28.71■■■□□ 2.19
SDHA-202ENST00000502379 TAF1DQ9H5J8 278 aaPredicted RBP28.7■■■□□ 2.18
SDHA-202ENST00000502379 PHAXQ9H814 394 aaKnown RBP28.7■■■□□ 2.18
SDHA-202ENST00000502379 COL4A5P29400 1685 aa28.7■■■□□ 2.18
SDHA-202ENST00000502379 IQCA1LA6NCM1 817 aa28.69■■■□□ 2.18
SDHA-202ENST00000502379 JDP2Q8WYK2 163 aa28.69■■■□□ 2.18
SDHA-202ENST00000502379 CHADLQ6NUI6 762 aa28.68■■■□□ 2.18
SDHA-202ENST00000502379 KLRG1Q96E93 195 aa28.68■■■□□ 2.18
SDHA-202ENST00000502379 FAM89AQ96GI7 184 aa28.68■■■□□ 2.18
SDHA-202ENST00000502379 BBOX1O75936 387 aa28.67■■■□□ 2.18
SDHA-202ENST00000502379 LARGE2Q8N3Y3 721 aa28.67■■■□□ 2.18
SDHA-202ENST00000502379 DDX46Q7L014 1031 aaKnown RBP28.66■■■□□ 2.18
SDHA-202ENST00000502379 RIC3Q7Z5B4 369 aa28.66■■■□□ 2.18
SDHA-202ENST00000502379 TSPYL6Q8N831 410 aa28.66■■■□□ 2.18
SDHA-202ENST00000502379 TSR2Q969E8 191 aaKnown RBP28.66■■■□□ 2.18
SDHA-202ENST00000502379 TMX4Q9H1E5 349 aaPredicted RBP28.66■■■□□ 2.18
SDHA-202ENST00000502379 MRS2Q9HD23 443 aa28.66■■■□□ 2.18
SDHA-202ENST00000502379 LAMB2P55268 1798 aa28.65■■■□□ 2.18
SDHA-202ENST00000502379 TRIM28Q13263 835 aaKnown RBP28.65■■■□□ 2.18
SDHA-202ENST00000502379 SP8Q8IXZ3 490 aa28.65■■■□□ 2.18
SDHA-202ENST00000502379 GPC2Q8N158 579 aa28.65■■■□□ 2.18
SDHA-202ENST00000502379 ANP32CO43423 234 aa28.64■■■□□ 2.18
SDHA-202ENST00000502379 GOLGA2Q08379 1002 aa28.64■■■□□ 2.18
SDHA-202ENST00000502379 GRAPQ13588 217 aa28.64■■■□□ 2.18
SDHA-202ENST00000502379 CCDC27Q2M243 656 aa28.64■■■□□ 2.18
SDHA-202ENST00000502379 RTL5Q5HYW3 569 aaPredicted RBP28.64■■■□□ 2.18
SDHA-202ENST00000502379 WWC1Q8IX03 1113 aa28.64■■■□□ 2.18
SDHA-202ENST00000502379 GRAPLQ8TC17 118 aaPredicted RBP28.64■■■□□ 2.18
SDHA-202ENST00000502379 HACL1Q9UJ83 578 aa28.64■■■□□ 2.18
SDHA-202ENST00000502379 EIF6P56537 245 aaKnown RBP28.63■■■□□ 2.17
SDHA-202ENST00000502379 SCN4AP35499 1836 aa28.62■■■□□ 2.17
SDHA-202ENST00000502379 PPIP5K2O43314 1243 aa28.62■■■□□ 2.17
SDHA-202ENST00000502379 LDHDQ86WU2 507 aa28.62■■■□□ 2.17
SDHA-202ENST00000502379 GJA3Q9Y6H8 435 aa28.62■■■□□ 2.17
SDHA-202ENST00000502379 EPHX2P34913 555 aa28.61■■■□□ 2.17
SDHA-202ENST00000502379 AOC3Q16853 763 aa28.61■■■□□ 2.17
SDHA-202ENST00000502379 EAPPQ56P03 285 aaPredicted RBP28.61■■■□□ 2.17
SDHA-202ENST00000502379 CCDC30Q5VVM6 783 aa28.61■■■□□ 2.17
SDHA-202ENST00000502379 RTFDC1Q9BY42 306 aaPredicted RBP28.61■■■□□ 2.17
SDHA-202ENST00000502379 SF3B3Q15393 1217 aaKnown RBP28.6■■■□□ 2.17
SDHA-202ENST00000502379 DPP8Q6V1X1 898 aaPredicted RBP28.6■■■□□ 2.17
SDHA-202ENST00000502379 NIM1KQ8IY84 436 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms