RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 HSPA1AP0DMV8 641 aaKnown RBP9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 HSPA1BP0DMV9 641 aaKnown RBP9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 HTRA3P83110 453 aa9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 RALBP1Q15311 655 aa9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 HSP90AB3PQ58FF7 597 aa9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 TNS4Q8IZW8 715 aa9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 SYNE4Q8N205 404 aa9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 RBM17Q96I25 401 aaKnown RBP9.43□□□□□ -0.9
SH3RF1-202ENST00000502315 COL11A2P13942 1736 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 PCNTO95613 3336 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 MAPK8IP3Q9UPT6 1336 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 PRAMEF22A3QJZ6 481 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 BBOX1O75936 387 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 EPHX2P34913 555 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 EIF6P56537 245 aaKnown RBP9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 HLFQ16534 295 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 TMC4Q7Z404 712 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 SUPT20HQ8NEM7 779 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 RPGRQ92834 1020 aaKnown RBP9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 NLRP3Q96P20 1036 aa9.42□□□□□ -0.9
SH3RF1-202ENST00000502315 SNED1Q8TER0 1413 aa9.41□□□□□ -0.9
SH3RF1-202ENST00000502315 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
SH3RF1-202ENST00000502315 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
SH3RF1-202ENST00000502315 USP50Q70EL3 339 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-202ENST00000502315 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
SH3RF1-202ENST00000502315 CHMP4AQ9BY43 222 aa9.41□□□□□ -0.9
SH3RF1-202ENST00000502315 CDHR2Q9BYE9 1310 aa9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 MAP2K1Q02750 393 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 CNTROBQ8N137 903 aa9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 AIDAQ96BJ3 306 aa9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 RTFDC1Q9BY42 306 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 ZNF277Q9NRM2 450 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-202ENST00000502315 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.91
SH3RF1-202ENST00000502315 HOXB7P09629 217 aa9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 PIP4K2AP48426 406 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 UTP14AQ9BVJ6 771 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 RRP7AQ9Y3A4 280 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 ATP6V0A2Q9Y487 856 aa9.39□□□□□ -0.91
SH3RF1-202ENST00000502315 KDM3BQ7LBC6 1761 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 NTSR2O95665 410 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 HSP90B1P14625 803 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 ECE1P42892 770 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 SUSD4Q5VX71 490 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 LRP10Q7Z4F1 713 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 SP8Q8IXZ3 490 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 MIS18AQ9NYP9 233 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
SH3RF1-202ENST00000502315 ADAMTSL1Q8N6G6 1762 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 POTEJP0CG39 1038 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 RIPK4P57078 832 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 PDIA6Q15084 440 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 TTLL7Q6ZT98 887 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 NIM1KQ8IY84 436 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 ADARB2Q9NS39 739 aaKnown RBP9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 PGAP2Q9UHJ9 254 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 NUP98P52948 1817 aa9.37□□□□□ -0.91
SH3RF1-202ENST00000502315 CHL1O00533 1208 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 CA12O43570 354 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 MYL6BP14649 208 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 MAP2K2P36507 400 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 TMPOP42166 694 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 VEGFBP49765 207 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 TRIM28Q13263 835 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 TNIP1Q15025 636 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 MKRN1Q9UHC7 482 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 ABCC12Q96J65 1359 aa9.36□□□□□ -0.91
SH3RF1-202ENST00000502315 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 SCNN1DP51172 638 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 KIAA2012Q0VF49 1180 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 DDX46Q7L014 1031 aaKnown RBP9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 NGEFQ8N5V2 710 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 DPF2Q92785 391 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
SH3RF1-202ENST00000502315 SH3TC1Q8TE82 1336 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 WDR33Q9C0J8 1336 aaKnown RBP9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 FOXN1O15353 648 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms