RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 BCORQ6W2J9 1755 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 SF3B2Q13435 895 aaKnown RBP11.28□□□□□ -0.6
LINC01550-202ENST00000502187 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 IGSF3O75054 1194 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 EIF5P55010 431 aaKnown RBP11.28□□□□□ -0.6
LINC01550-202ENST00000502187 GCKRQ14397 625 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 TXNRD1Q16881 649 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
LINC01550-202ENST00000502187 SMC5Q8IY18 1101 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 GCC1Q96CN9 775 aa11.28□□□□□ -0.6
LINC01550-202ENST00000502187 C4BP0C0L5 1744 aa11.27□□□□□ -0.6
LINC01550-202ENST00000502187 COL15A1P39059 1388 aa11.27□□□□□ -0.6
LINC01550-202ENST00000502187 UTYO14607 1347 aa11.27□□□□□ -0.6
LINC01550-202ENST00000502187 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
LINC01550-202ENST00000502187 PLSCR1O15162 318 aa11.27□□□□□ -0.61
LINC01550-202ENST00000502187 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
LINC01550-202ENST00000502187 HSP90AB3PQ58FF7 597 aa11.27□□□□□ -0.61
LINC01550-202ENST00000502187 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
LINC01550-202ENST00000502187 TCIRG1Q13488 830 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
LINC01550-202ENST00000502187 CWC25Q9NXE8 425 aaPredicted RBP11.26□□□□□ -0.61
LINC01550-202ENST00000502187 TBC1D2BQ9UPU7 963 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 SLC27A3Q5K4L6 730 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 RC3H1Q5TC82 1133 aaKnown RBP11.26□□□□□ -0.61
LINC01550-202ENST00000502187 CCDC191Q8NCU4 936 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
LINC01550-202ENST00000502187 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 A0A087WZG4 1122 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 ISCA1Q9BUE6 129 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 GNPATO15228 680 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
LINC01550-202ENST00000502187 DEFB132Q7Z7B7 95 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 SKAP1Q86WV1 359 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 DCTPP1Q9H773 170 aa11.25□□□□□ -0.61
LINC01550-202ENST00000502187 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 RGS3P49796 1198 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 HLFQ16534 295 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 AK7Q96M32 723 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 RGPD3A6NKT7 1758 aaPredicted RBP11.24□□□□□ -0.61
LINC01550-202ENST00000502187 RGPD4Q7Z3J3 1758 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 UBR3Q6ZT12 1888 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 C4AP0C0L4 1744 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 PHF14O94880 888 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 TRIM28Q13263 835 aaKnown RBP11.24□□□□□ -0.61
LINC01550-202ENST00000502187 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
LINC01550-202ENST00000502187 SRGAP3O43295 1099 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 RPS6KA4O75676 772 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 BAG6P46379 1132 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 RTCBQ9Y3I0 505 aaKnown RBP11.23□□□□□ -0.61
LINC01550-202ENST00000502187 MYH3P11055 1940 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 APBB1O00213 710 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 CAMTA2O94983 1202 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 GPTP24298 496 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 HMGB2P26583 209 aaKnown RBP11.23□□□□□ -0.61
LINC01550-202ENST00000502187 NUCB1Q02818 461 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 MTX1Q13505 466 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
LINC01550-202ENST00000502187 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
LINC01550-202ENST00000502187 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
LINC01550-202ENST00000502187 H7C1W4 665 aa11.22□□□□□ -0.61
LINC01550-202ENST00000502187 ANKRD45Q5TZF3 282 aa11.22□□□□□ -0.61
LINC01550-202ENST00000502187 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
LINC01550-202ENST00000502187 KAZALD1Q96I82 304 aa11.22□□□□□ -0.61
LINC01550-202ENST00000502187 CAMKK2Q96RR4 588 aa11.22□□□□□ -0.61
LINC01550-202ENST00000502187 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.61
LINC01550-202ENST00000502187 CASP7P55210 303 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 POLA2Q14181 598 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 TRAPPC3LQ5T215 181 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 NLRP10Q86W26 655 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 TFCP2L1Q9NZI6 479 aa11.21□□□□□ -0.61
LINC01550-202ENST00000502187 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
LINC01550-202ENST00000502187 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
LINC01550-202ENST00000502187 ZNF34Q8IZ26 560 aa11.2□□□□□ -0.62
LINC01550-202ENST00000502187 EXOC6BQ9Y2D4 811 aa11.2□□□□□ -0.62
LINC01550-202ENST00000502187 CCDC125Q86Z20 511 aa11.2□□□□□ -0.62
LINC01550-202ENST00000502187 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
LINC01550-202ENST00000502187 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
LINC01550-202ENST00000502187 LAMB2P55268 1798 aa11.2□□□□□ -0.62
LINC01550-202ENST00000502187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
LINC01550-202ENST00000502187 RFC4P35249 363 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
LINC01550-202ENST00000502187 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
LINC01550-202ENST00000502187 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 ZPR1O75312 459 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 SURF6O75683 361 aaKnown RBP11.19□□□□□ -0.62
LINC01550-202ENST00000502187 PARP10Q53GL7 1025 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms