RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 NECTIN1Q15223 517 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 FSD1Q9BTV5 496 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 USP25Q9UHP3 1055 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 ERBB3P21860 1342 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 KDM6AO15550 1401 aaPredicted RBP19.14■□□□□ 0.65
PCBP4-218ENST00000498822 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 EVI5LQ96CN4 794 aa19.14■□□□□ 0.65
PCBP4-218ENST00000498822 DDX21Q9NR30 783 aaKnown RBP eCLIP19.14■□□□□ 0.65
PCBP4-218ENST00000498822 GPATCH3Q96I76 525 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 ZNF496Q96IT1 587 aaPredicted RBP19.13■□□□□ 0.65
PCBP4-218ENST00000498822 MTMR6Q9Y217 621 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 CYP46A1Q9Y6A2 500 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 SLIT3O75094 1523 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 STK3Q13188 491 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 GIMAP6Q6P9H5 292 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 RUFY2Q8WXA3 655 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 ZSWIM6Q9HCJ5 1215 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.13■□□□□ 0.65
PCBP4-218ENST00000498822 USP16Q9Y5T5 823 aa19.13■□□□□ 0.65
PCBP4-218ENST00000498822 ATP5J2-PTCD1G3V325 749 aa19.12■□□□□ 0.65
PCBP4-218ENST00000498822 PTCD1O75127 700 aaKnown RBP19.12■□□□□ 0.65
PCBP4-218ENST00000498822 OFD1O75665 1012 aa19.12■□□□□ 0.65
PCBP4-218ENST00000498822 CHRNA2Q15822 529 aa19.12■□□□□ 0.65
PCBP4-218ENST00000498822 ZKSCAN5Q9Y2L8 839 aa19.12■□□□□ 0.65
PCBP4-218ENST00000498822 NCAPD2Q15021 1401 aa19.12■□□□□ 0.65
PCBP4-218ENST00000498822 NEURL1BA8MQ27 555 aa19.12■□□□□ 0.65
PCBP4-218ENST00000498822 SYAP1Q96A49 352 aaPredicted RBP19.12■□□□□ 0.65
PCBP4-218ENST00000498822 SLC27A2O14975 620 aa19.11■□□□□ 0.65
PCBP4-218ENST00000498822 EPB41L2O43491 1005 aaKnown RBP19.11■□□□□ 0.65
PCBP4-218ENST00000498822 SLFNL1Q499Z3 407 aa19.11■□□□□ 0.65
PCBP4-218ENST00000498822 PTMAP06454 111 aaKnown RBP19.11■□□□□ 0.65
PCBP4-218ENST00000498822 VPS53Q5VIR6 699 aa19.11■□□□□ 0.65
PCBP4-218ENST00000498822 CCDC129Q6ZRS4 1044 aa19.11■□□□□ 0.65
PCBP4-218ENST00000498822 CDC37L1Q7L3B6 337 aa19.11■□□□□ 0.65
PCBP4-218ENST00000498822 ERC1Q8IUD2 1116 aa19.11■□□□□ 0.65
PCBP4-218ENST00000498822 TRPM3Q9HCF6 1732 aaPredicted RBP19.11■□□□□ 0.65
PCBP4-218ENST00000498822 MEGF6O75095 1541 aa19.1■□□□□ 0.65
PCBP4-218ENST00000498822 C17orf53Q8N3J3 647 aaPredicted RBP19.1■□□□□ 0.65
PCBP4-218ENST00000498822 COL15A1P39059 1388 aa19.1■□□□□ 0.65
PCBP4-218ENST00000498822 PLCB2Q00722 1185 aa19.1■□□□□ 0.65
PCBP4-218ENST00000498822 SEC62Q99442 399 aaKnown RBP19.1■□□□□ 0.65
PCBP4-218ENST00000498822 DDX58O95786 925 aaKnown RBP19.09■□□□□ 0.65
PCBP4-218ENST00000498822 GCKRQ14397 625 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 UBE3BQ7Z3V4 1068 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 TMEM87AQ8NBN3 555 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 RAPGEF4Q8WZA2 1011 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 SLC52A2Q9HAB3 445 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 NPHP3Q7Z494 1330 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 RBM10P98175 930 aaKnown RBP19.09■□□□□ 0.65
PCBP4-218ENST00000498822 MAP4K1Q92918 833 aa19.09■□□□□ 0.65
PCBP4-218ENST00000498822 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCBP4-218ENST00000498822 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.65
PCBP4-218ENST00000498822 ZKSCAN1P17029 563 aaPredicted RBP19.08■□□□□ 0.65
PCBP4-218ENST00000498822 PROSER2Q86WR7 435 aaPredicted RBP19.08■□□□□ 0.65
PCBP4-218ENST00000498822 DBNLQ9UJU6 430 aaKnown RBP19.08■□□□□ 0.65
PCBP4-218ENST00000498822 UBE2HP62256 183 aa19.08■□□□□ 0.64
PCBP4-218ENST00000498822 TFCP2Q12800 502 aa19.08■□□□□ 0.64
PCBP4-218ENST00000498822 UTYO14607 1347 aa19.08■□□□□ 0.64
PCBP4-218ENST00000498822 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
PCBP4-218ENST00000498822 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
PCBP4-218ENST00000498822 CAMTA1Q9Y6Y1 1673 aa19.07■□□□□ 0.64
PCBP4-218ENST00000498822 HSP90AA2PQ14568 343 aaPredicted RBP19.07■□□□□ 0.64
PCBP4-218ENST00000498822 HS1BP3Q53T59 392 aa19.07■□□□□ 0.64
PCBP4-218ENST00000498822 DNAJC2Q99543 621 aaKnown RBP19.07■□□□□ 0.64
PCBP4-218ENST00000498822 ZNF500O60304 480 aaPredicted RBP19.07■□□□□ 0.64
PCBP4-218ENST00000498822 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
PCBP4-218ENST00000498822 PHKG2P15735 406 aa19.07■□□□□ 0.64
PCBP4-218ENST00000498822 CCDC39Q9UFE4 941 aa19.07■□□□□ 0.64
PCBP4-218ENST00000498822 PPFIA3O75145 1194 aa19.06■□□□□ 0.64
PCBP4-218ENST00000498822 LRRC2Q9BYS8 371 aa19.06■□□□□ 0.64
PCBP4-218ENST00000498822 NEXNQ0ZGT2 675 aa19.06■□□□□ 0.64
PCBP4-218ENST00000498822 LARP1Q6PKG0 1096 aaKnown RBP19.06■□□□□ 0.64
PCBP4-218ENST00000498822 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.06■□□□□ 0.64
PCBP4-218ENST00000498822 KCNB2Q92953 911 aa19.06■□□□□ 0.64
PCBP4-218ENST00000498822 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
PCBP4-218ENST00000498822 TTC12Q9H892 705 aaPredicted RBP19.06■□□□□ 0.64
PCBP4-218ENST00000498822 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
PCBP4-218ENST00000498822 AP5Z1O43299 807 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 PHF14O94880 888 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 TOB2Q14106 344 aaPredicted RBP19.05■□□□□ 0.64
PCBP4-218ENST00000498822 CAMK4Q16566 473 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 LARP1BQ659C4 914 aaKnown RBP19.05■□□□□ 0.64
PCBP4-218ENST00000498822 OVOS2A0A0G2JMS6 1433 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 MED23Q9ULK4 1368 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 ADCY5O95622 1261 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 TTC6Q86TZ1 520 aa19.05■□□□□ 0.64
PCBP4-218ENST00000498822 METTL22Q9BUU2 404 aaPredicted RBP19.05■□□□□ 0.64
PCBP4-218ENST00000498822 CYP27B1O15528 508 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 DDX46Q7L014 1031 aaKnown RBP19.04■□□□□ 0.64
PCBP4-218ENST00000498822 LRP10Q7Z4F1 713 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 DBNDD2Q9BQY9 259 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 TM6SF1Q9BZW5 370 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 TFIP11Q9UBB9 837 aaKnown RBP19.04■□□□□ 0.64
PCBP4-218ENST00000498822 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
PCBP4-218ENST00000498822 RRP9O43818 475 aaKnown RBP19.04■□□□□ 0.64
PCBP4-218ENST00000498822 JAK2O60674 1132 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms