RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	CANX	P27824	592 aa	Known RBP	14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	CAMK2B	Q13554	666 aa		14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	DCTN1	Q14203	1278 aa		14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	ZNF496	Q96IT1	587 aa	Predicted RBP	14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	TEX13A	Q9BXU3	409 aa	Predicted RBP	14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	CD2AP	Q9Y5K6	639 aa		14.05	□□□□□ -0.16
CDK11A-222	ENST00000498810	KIF13B	Q9NQT8	1826 aa		14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	HTATSF1	O43719	755 aa	Known RBP	14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	EVI5	O60447	810 aa		14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	CYP19A1	P11511	503 aa	Predicted RBP	14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	NFE2L2	Q16236	605 aa		14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	ZBTB1	Q9Y2K1	713 aa		14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	USP42	Q9H9J4	1324 aa	Known RBP	14.04	□□□□□ -0.16
CDK11A-222	ENST00000498810	SRP68	Q9UHB9	627 aa	Known RBP	14.03	□□□□□ -0.16
CDK11A-222	ENST00000498810	SOS1	Q07889	1333 aa	Predicted RBP	14.03	□□□□□ -0.16
CDK11A-222	ENST00000498810	BCOR	Q6W2J9	1755 aa		14.02	□□□□□ -0.16
CDK11A-222	ENST00000498810	GYS1	P13807	737 aa		14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	MAP3K9	P80192	1104 aa		14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	LMOD3	Q0VAK6	560 aa		14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	INTS5	Q6P9B9	1019 aa	Known RBP	14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	CFAP44	Q96MT7	982 aa		14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	WWC3	Q9ULE0	1092 aa		14.02	□□□□□ -0.17
CDK11A-222	ENST00000498810	AFDN	P55196	1824 aa	Known RBP	14.01	□□□□□ -0.17
CDK11A-222	ENST00000498810		A0A087WZG4	1122 aa		14.01	□□□□□ -0.17
CDK11A-222	ENST00000498810	USPL1	Q5W0Q7	1092 aa		14.01	□□□□□ -0.17
CDK11A-222	ENST00000498810	CCDC146	Q8IYE0	955 aa		14.01	□□□□□ -0.17
CDK11A-222	ENST00000498810	PNISR	Q8TF01	805 aa	Known RBP	14.01	□□□□□ -0.17
CDK11A-222	ENST00000498810	NPHP1	O15259	732 aa		14	□□□□□ -0.17
CDK11A-222	ENST00000498810	FOSB	P53539	338 aa		14	□□□□□ -0.17
CDK11A-222	ENST00000498810	TAF7	Q15545	349 aa	Predicted RBP	14	□□□□□ -0.17
CDK11A-222	ENST00000498810	PLEKHF1	Q96S99	279 aa		14	□□□□□ -0.17
CDK11A-222	ENST00000498810	C10orf71	Q711Q0	1435 aa		13.99	□□□□□ -0.17
CDK11A-222	ENST00000498810	KCNQ3	O43525	872 aa		13.99	□□□□□ -0.17
CDK11A-222	ENST00000498810	GRIN3B	O60391	1043 aa		13.99	□□□□□ -0.17
CDK11A-222	ENST00000498810	SNRPA1	P09661	255 aa	Known RBP	13.99	□□□□□ -0.17
CDK11A-222	ENST00000498810	RIPK4	P57078	832 aa		13.99	□□□□□ -0.17
CDK11A-222	ENST00000498810	NEUROD2	Q15784	382 aa		13.99	□□□□□ -0.17
CDK11A-222	ENST00000498810	PSEN2	P49810	448 aa		13.98	□□□□□ -0.17
CDK11A-222	ENST00000498810	ZNF454	Q8N9F8	522 aa		13.98	□□□□□ -0.17
CDK11A-222	ENST00000498810	THUMPD2	Q9BTF0	503 aa	Known RBP	13.98	□□□□□ -0.17
CDK11A-222	ENST00000498810	NARF	Q9UHQ1	456 aa		13.98	□□□□□ -0.17
CDK11A-222	ENST00000498810	KIAA1551	Q9HCM1	1747 aa		13.98	□□□□□ -0.17
CDK11A-222	ENST00000498810	BRCA1	P38398	1863 aa	Known RBP	13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	ANP32C	O43423	234 aa		13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	DMRTA1	Q5VZB9	504 aa		13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	BICDL1	Q6ZP65	573 aa		13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	RNF166	Q96A37	237 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	RUNDC1	Q96C34	613 aa		13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	MIS18A	Q9NYP9	233 aa		13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	TSPYL4	Q9UJ04	414 aa		13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	RRP7A	Q9Y3A4	280 aa	Known RBP	13.97	□□□□□ -0.17
CDK11A-222	ENST00000498810	PXDNL	A1KZ92	1463 aa		13.96	□□□□□ -0.17
CDK11A-222	ENST00000498810	A1BG	P04217	495 aa		13.96	□□□□□ -0.17
CDK11A-222	ENST00000498810	IL6ST	P40189	918 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK11A-222	ENST00000498810	CACNA1S	Q13698	1873 aa		13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	ARFGEF1	Q9Y6D6	1849 aa		13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	YBX3	P16989	372 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	TMPO	P42166	694 aa	Known RBP	13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	PIP4K2A	P48426	406 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	TGFB2	P61812	414 aa		13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	BCL2L12	Q9HB09	334 aa		13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	TBC1D2B	Q9UPU7	963 aa		13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	ZNF652	Q9Y2D9	606 aa		13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	LAS1L	Q9Y4W2	734 aa	Known RBP	13.95	□□□□□ -0.18
CDK11A-222	ENST00000498810	DLEC1	Q9Y238	1755 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	PRAMEF22	A3QJZ6	481 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	TK2	O00142	265 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	EIF5	P55010	431 aa	Known RBP	13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	DDR1	Q08345	913 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	ADGRD1	Q6QNK2	874 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	DZIP3	Q86Y13	1208 aa	Known RBP	13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	NRXN2	Q9P2S2	1712 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	BCS1L	Q9Y276	419 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810	CARMIL3	Q8ND23	1372 aa		13.94	□□□□□ -0.18
CDK11A-222	ENST00000498810		A0A0G2JLW4	131 aa		13.93	□□□□□ -0.18
CDK11A-222	ENST00000498810	POLRMT	O00411	1230 aa	Known RBP	13.93	□□□□□ -0.18
CDK11A-222	ENST00000498810	NFIX	Q14938	502 aa		13.93	□□□□□ -0.18
CDK11A-222	ENST00000498810	ADAMTS8	Q9UP79	889 aa		13.93	□□□□□ -0.18
CDK11A-222	ENST00000498810	USP16	Q9Y5T5	823 aa		13.93	□□□□□ -0.18
CDK11A-222	ENST00000498810	NUP98	P52948	1817 aa		13.92	□□□□□ -0.18
CDK11A-222	ENST00000498810	SERPINB2	P05120	415 aa		13.91	□□□□□ -0.18
CDK11A-222	ENST00000498810	DPEP1	P16444	411 aa		13.91	□□□□□ -0.18
CDK11A-222	ENST00000498810	KIF6	Q6ZMV9	814 aa		13.91	□□□□□ -0.18
CDK11A-222	ENST00000498810	NGEF	Q8N5V2	710 aa		13.91	□□□□□ -0.18
CDK11A-222	ENST00000498810	KCNK17	Q96T54	332 aa		13.91	□□□□□ -0.18
CDK11A-222	ENST00000498810	EIF4A1	P60842	406 aa	Known RBP	13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	ST5	P78524	1137 aa		13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	TBC1D9B	Q66K14	1250 aa		13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	CNBD1	Q8NA66	436 aa		13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	SETDB2	Q96T68	719 aa		13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	MRS2	Q9HD23	443 aa		13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	ANKRD31	Q8N7Z5	1873 aa		13.9	□□□□□ -0.18
CDK11A-222	ENST00000498810	DPYSL4	O14531	572 aa		13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	HR	O43593	1189 aa		13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	GIGYF1	O75420	1035 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	MYL6B	P14649	208 aa		13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	TM4SF1	P30408	202 aa		13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	ZDHHC16	Q969W1	377 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms