RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CT47B1P0C2W7 299 aaPredicted RBP21.41■■□□□ 1.02
PRKCB-210ENST00000498739 YBX3P16989 372 aaKnown RBP eCLIP21.41■■□□□ 1.029e-9■■■□□ 17
PRKCB-210ENST00000498739 PIM2Q9P1W9 311 aa21.41■■□□□ 1.02
PRKCB-210ENST00000498739 TRMT112Q9UI30 125 aaKnown RBP21.41■■□□□ 1.02
PRKCB-210ENST00000498739 MRPL50Q8N5N7 158 aaKnown RBP21.4■■□□□ 1.02
PRKCB-210ENST00000498739 SSH1Q8WYL5 1049 aa21.4■■□□□ 1.02
PRKCB-210ENST00000498739 BCL2L13Q9BXK5 485 aa21.4■■□□□ 1.02
PRKCB-210ENST00000498739 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
PRKCB-210ENST00000498739 BCS1LQ9Y276 419 aa21.4■■□□□ 1.02
PRKCB-210ENST00000498739 RNF123Q5XPI4 1314 aa21.39■■□□□ 1.01
PRKCB-210ENST00000498739 NEXNQ0ZGT2 675 aa21.39■■□□□ 1.01
PRKCB-210ENST00000498739 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.01
PRKCB-210ENST00000498739 COL11A2P13942 1736 aaPredicted RBP21.38■■□□□ 1.01
PRKCB-210ENST00000498739 TNRC6CQ9HCJ0 1690 aaKnown RBP21.38■■□□□ 1.01
PRKCB-210ENST00000498739 TRIM28Q13263 835 aaKnown RBP21.38■■□□□ 1.01
PRKCB-210ENST00000498739 DNAAF4Q8WXU2 420 aa21.38■■□□□ 1.01
PRKCB-210ENST00000498739 ZNF622Q969S3 477 aaKnown RBP eCLIP21.38■■□□□ 1.011e-8■□□□□ 8.3
PRKCB-210ENST00000498739 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
PRKCB-210ENST00000498739 RIC1Q4ADV7 1423 aa21.38■■□□□ 1.01
PRKCB-210ENST00000498739 CACNA1FO60840 1977 aa21.37■■□□□ 1.01
PRKCB-210ENST00000498739 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
PRKCB-210ENST00000498739 DALRD3Q5D0E6 543 aaKnown RBP21.37■■□□□ 1.01
PRKCB-210ENST00000498739 CCDC191Q8NCU4 936 aa21.37■■□□□ 1.01
PRKCB-210ENST00000498739 DLEC1Q9Y238 1755 aa21.37■■□□□ 1.01
PRKCB-210ENST00000498739 BRCA1P38398 1863 aaKnown RBP21.37■■□□□ 1.01
PRKCB-210ENST00000498739 F6X3S4 739 aa21.36■■□□□ 1.01
PRKCB-210ENST00000498739 SRGNP10124 158 aa21.36■■□□□ 1.01
PRKCB-210ENST00000498739 RTL5Q5HYW3 569 aaPredicted RBP21.36■■□□□ 1.01
PRKCB-210ENST00000498739 SYNE4Q8N205 404 aa21.36■■□□□ 1.01
PRKCB-210ENST00000498739 FAM89AQ96GI7 184 aa21.36■■□□□ 1.01
PRKCB-210ENST00000498739 CWC25Q9NXE8 425 aaPredicted RBP21.36■■□□□ 1.01
PRKCB-210ENST00000498739 KLRG2A4D1S0 409 aaPredicted RBP21.35■■□□□ 1.01
PRKCB-210ENST00000498739 GRIN3BO60391 1043 aa21.35■■□□□ 1.01
PRKCB-210ENST00000498739 IGKV5-2P06315 115 aa21.35■■□□□ 1.01
PRKCB-210ENST00000498739 CWF19L2Q2TBE0 894 aaKnown RBP21.35■■□□□ 1.01
PRKCB-210ENST00000498739 TTLL6Q8N841 843 aa21.35■■□□□ 1.01
PRKCB-210ENST00000498739 MASTLQ96GX5 879 aa21.35■■□□□ 1.01
PRKCB-210ENST00000498739 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
PRKCB-210ENST00000498739 NPR1P16066 1061 aa21.34■■□□□ 1.01
PRKCB-210ENST00000498739 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
PRKCB-210ENST00000498739 STYK1Q6J9G0 422 aa21.34■■□□□ 1.01
PRKCB-210ENST00000498739 NLRP3Q96P20 1036 aa21.34■■□□□ 1.01
PRKCB-210ENST00000498739 NEURL1BA8MQ27 555 aa21.33■■□□□ 1.01
PRKCB-210ENST00000498739 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
PRKCB-210ENST00000498739 ZBTB38Q8NAP3 1195 aaPredicted RBP21.33■■□□□ 1.01
PRKCB-210ENST00000498739 PTPRCP08575 1304 aa21.32■■□□□ 1
PRKCB-210ENST00000498739 CRY2Q49AN0 593 aa21.32■■□□□ 1
PRKCB-210ENST00000498739 C3orf67Q6ZVT6 689 aa21.32■■□□□ 1
PRKCB-210ENST00000498739 LINS1Q8NG48 757 aa21.32■■□□□ 1
PRKCB-210ENST00000498739 RPGRQ92834 1020 aaKnown RBP21.32■■□□□ 1
PRKCB-210ENST00000498739 CNKSR1Q969H4 720 aa21.32■■□□□ 1
PRKCB-210ENST00000498739 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
PRKCB-210ENST00000498739 SLC4A10Q6U841 1118 aa21.31■■□□□ 1
PRKCB-210ENST00000498739 JARID2Q92833 1246 aaPredicted RBP21.31■■□□□ 1
PRKCB-210ENST00000498739 IRS4O14654 1257 aaPredicted RBP21.3■■□□□ 1
PRKCB-210ENST00000498739 BEND3Q5T5X7 828 aa21.3■■□□□ 1
PRKCB-210ENST00000498739 PRPF40BQ6NWY9 871 aaKnown RBP21.29■■□□□ 1
PRKCB-210ENST00000498739 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
PRKCB-210ENST00000498739 ZNF219Q9P2Y4 722 aaPredicted RBP21.29■■□□□ 1
PRKCB-210ENST00000498739 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
PRKCB-210ENST00000498739 ARFGEF1Q9Y6D6 1849 aa21.28■■□□□ 1
PRKCB-210ENST00000498739 ALDH1B1P30837 517 aa21.28■■□□□ 1
PRKCB-210ENST00000498739 GCKRQ14397 625 aa21.28■■□□□ 1
PRKCB-210ENST00000498739 RBM17Q96I25 401 aaKnown RBP21.28■■□□□ 1
PRKCB-210ENST00000498739 NOB1Q9ULX3 412 aaKnown RBP21.28■■□□□ 1
PRKCB-210ENST00000498739 BRPF1P55201 1214 aaPredicted RBP21.27■■□□□ 1
PRKCB-210ENST00000498739 ARHGAP27Q6ZUM4 889 aa21.27■■□□□ 1
PRKCB-210ENST00000498739 SRCIN1Q9C0H9 1055 aa21.27■■□□□ 1
PRKCB-210ENST00000498739 LAMB2P55268 1798 aa21.27■■□□□ 1
PRKCB-210ENST00000498739 KIF16BQ96L93 1317 aa21.27■□□□□ 0.99
PRKCB-210ENST00000498739 CDHR2Q9BYE9 1310 aa21.27■□□□□ 0.99
PRKCB-210ENST00000498739 CACNA1SQ13698 1873 aa21.26■□□□□ 0.99
PRKCB-210ENST00000498739 C21orf2O43822 256 aa21.26■□□□□ 0.99
PRKCB-210ENST00000498739 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
PRKCB-210ENST00000498739 HOXA10P31260 410 aaPredicted RBP21.26■□□□□ 0.99
PRKCB-210ENST00000498739 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
PRKCB-210ENST00000498739 H7C1W4 665 aa21.25■□□□□ 0.99
PRKCB-210ENST00000498739 BCAR3O75815 825 aa21.25■□□□□ 0.99
PRKCB-210ENST00000498739 CRAMP1Q96RY5 1269 aa21.25■□□□□ 0.99
PRKCB-210ENST00000498739 PDE8AO60658 829 aa21.24■□□□□ 0.99
PRKCB-210ENST00000498739 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
PRKCB-210ENST00000498739 SF3B3Q15393 1217 aaKnown RBP21.24■□□□□ 0.99
PRKCB-210ENST00000498739 DDX46Q7L014 1031 aaKnown RBP21.24■□□□□ 0.99
PRKCB-210ENST00000498739 API5Q9BZZ5 524 aaKnown RBP21.24■□□□□ 0.99
PRKCB-210ENST00000498739 SLX4Q8IY92 1834 aa21.24■□□□□ 0.99
PRKCB-210ENST00000498739 ABCC4O15439 1325 aa21.24■□□□□ 0.99
PRKCB-210ENST00000498739 FRAT1Q92837 279 aaPredicted RBP21.23■□□□□ 0.99
PRKCB-210ENST00000498739 C9orf78Q9NZ63 289 aaPredicted RBP21.22■□□□□ 0.99
PRKCB-210ENST00000498739 PPEF1O14829 653 aaPredicted RBP21.21■□□□□ 0.99
PRKCB-210ENST00000498739 CASP7P55210 303 aa21.21■□□□□ 0.99
PRKCB-210ENST00000498739 SOGA3Q5TF21 947 aa21.21■□□□□ 0.99
PRKCB-210ENST00000498739 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
PRKCB-210ENST00000498739 GRM8O00222 908 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 IPO8O15397 1037 aaKnown RBP21.2■□□□□ 0.98
PRKCB-210ENST00000498739 CTSWP56202 376 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 RASSF7Q02833 373 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 GRAPQ13588 217 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 CCDC152Q4G0S7 254 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 OLFM4Q6UX06 510 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 GRAPLQ8TC17 118 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms