RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 RIC1Q4ADV7 1423 aa19.54■□□□□ 0.72
TRAF4-212ENST00000498540 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
TRAF4-212ENST00000498540 ERVV-1B6SEH8 477 aa19.54■□□□□ 0.72
TRAF4-212ENST00000498540 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
TRAF4-212ENST00000498540 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
TRAF4-212ENST00000498540 GPTP24298 496 aa19.53■□□□□ 0.72
TRAF4-212ENST00000498540 LBX1P52954 281 aa19.53■□□□□ 0.72
TRAF4-212ENST00000498540 DEFB115Q30KQ5 88 aa19.53■□□□□ 0.72
TRAF4-212ENST00000498540 GJA3Q9Y6H8 435 aa19.53■□□□□ 0.72
TRAF4-212ENST00000498540 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-212ENST00000498540 THSD7BQ9C0I4 1608 aa19.52■□□□□ 0.72
TRAF4-212ENST00000498540 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
TRAF4-212ENST00000498540 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
TRAF4-212ENST00000498540 MYL6BP14649 208 aa19.51■□□□□ 0.71
TRAF4-212ENST00000498540 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-212ENST00000498540 EIF6P56537 245 aaKnown RBP19.51■□□□□ 0.71
TRAF4-212ENST00000498540 EIF4A1P60842 406 aaKnown RBP19.51■□□□□ 0.71
TRAF4-212ENST00000498540 CC2D2BQ6DHV5 1058 aa19.51■□□□□ 0.71
TRAF4-212ENST00000498540 KIF6Q6ZMV9 814 aa19.51■□□□□ 0.71
TRAF4-212ENST00000498540 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
TRAF4-212ENST00000498540 ABT1Q9ULW3 272 aaKnown RBP19.51■□□□□ 0.71
TRAF4-212ENST00000498540 WDR33Q9C0J8 1336 aaKnown RBP19.51■□□□□ 0.71
TRAF4-212ENST00000498540 SCNN1DP51172 638 aa19.5■□□□□ 0.71
TRAF4-212ENST00000498540 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRAF4-212ENST00000498540 SUSD4Q5VX71 490 aa19.5■□□□□ 0.71
TRAF4-212ENST00000498540 C3orf67Q6ZVT6 689 aa19.5■□□□□ 0.71
TRAF4-212ENST00000498540 THUMPD2Q9BTF0 503 aaKnown RBP19.5■□□□□ 0.71
TRAF4-212ENST00000498540 DDX21Q9NR30 783 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRAF4-212ENST00000498540 TRPM7Q96QT4 1865 aa19.5■□□□□ 0.71
TRAF4-212ENST00000498540 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
TRAF4-212ENST00000498540 HSPA8P11142 646 aaKnown RBP19.49■□□□□ 0.71
TRAF4-212ENST00000498540 LMOD1P29536 600 aaPredicted RBP19.49■□□□□ 0.71
TRAF4-212ENST00000498540 EPS15P42566 896 aa19.49■□□□□ 0.71
TRAF4-212ENST00000498540 LARGE2Q8N3Y3 721 aa19.49■□□□□ 0.71
TRAF4-212ENST00000498540 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
TRAF4-212ENST00000498540 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-212ENST00000498540 NTSR2O95665 410 aa19.48■□□□□ 0.71
TRAF4-212ENST00000498540 ZNF34Q8IZ26 560 aa19.48■□□□□ 0.71
TRAF4-212ENST00000498540 RBM17Q96I25 401 aaKnown RBP19.47■□□□□ 0.71
TRAF4-212ENST00000498540 CRAMP1Q96RY5 1269 aa19.47■□□□□ 0.71
TRAF4-212ENST00000498540 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
TRAF4-212ENST00000498540 GRIPAP1Q4V328 841 aa19.46■□□□□ 0.71
TRAF4-212ENST00000498540 GIGYF2Q6Y7W6 1299 aaKnown RBP19.46■□□□□ 0.71
TRAF4-212ENST00000498540 LAMB2P55268 1798 aa19.46■□□□□ 0.71
TRAF4-212ENST00000498540 TRAF5O00463 557 aa19.45■□□□□ 0.7
TRAF4-212ENST00000498540 NEFMP07197 916 aa19.45■□□□□ 0.7
TRAF4-212ENST00000498540 MAP2K1Q02750 393 aaPredicted RBP19.45■□□□□ 0.7
TRAF4-212ENST00000498540 NFE2L2Q16236 605 aa19.45■□□□□ 0.7
TRAF4-212ENST00000498540 NIM1KQ8IY84 436 aa19.45■□□□□ 0.7
TRAF4-212ENST00000498540 PPIP5K2O43314 1243 aa19.44■□□□□ 0.7
TRAF4-212ENST00000498540 AOC3Q16853 763 aa19.44■□□□□ 0.7
TRAF4-212ENST00000498540 CAPNS2Q96L46 248 aa19.44■□□□□ 0.7
TRAF4-212ENST00000498540 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
TRAF4-212ENST00000498540 CST9Q5W186 159 aa19.43■□□□□ 0.7
TRAF4-212ENST00000498540 CYP4F22Q6NT55 531 aa19.43■□□□□ 0.7
TRAF4-212ENST00000498540 PAXIP1Q6ZW49 1069 aaPredicted RBP19.43■□□□□ 0.7
TRAF4-212ENST00000498540 USP50Q70EL3 339 aaPredicted RBP19.43■□□□□ 0.7
TRAF4-212ENST00000498540 LRP10Q7Z4F1 713 aa19.43■□□□□ 0.7
TRAF4-212ENST00000498540 PPP1R42Q7Z4L9 355 aa19.43■□□□□ 0.7
TRAF4-212ENST00000498540 ABHD8Q96I13 439 aa19.43■□□□□ 0.7
TRAF4-212ENST00000498540 ERBB4Q15303 1308 aa19.43■□□□□ 0.7
TRAF4-212ENST00000498540 GRM1Q13255 1194 aa19.42■□□□□ 0.7
TRAF4-212ENST00000498540 PARP10Q53GL7 1025 aa19.41■□□□□ 0.7
TRAF4-212ENST00000498540 NLRP3Q96P20 1036 aa19.41■□□□□ 0.7
TRAF4-212ENST00000498540 GPRC5DQ9NZD1 345 aa19.41■□□□□ 0.7
TRAF4-212ENST00000498540 ATP6V0A2Q9Y487 856 aa19.41■□□□□ 0.7
TRAF4-212ENST00000498540 ABCC4O15439 1325 aa19.41■□□□□ 0.7
TRAF4-212ENST00000498540 ANXA1P04083 346 aa19.4■□□□□ 0.7
TRAF4-212ENST00000498540 ECE1P42892 770 aa19.4■□□□□ 0.7
TRAF4-212ENST00000498540 PDIA6Q15084 440 aa19.4■□□□□ 0.7
TRAF4-212ENST00000498540 PROSER3Q2NL68 480 aa19.4■□□□□ 0.7
TRAF4-212ENST00000498540 ADARB2Q9NS39 739 aaKnown RBP19.4■□□□□ 0.7
TRAF4-212ENST00000498540 TLL2Q9Y6L7 1015 aa19.4■□□□□ 0.7
TRAF4-212ENST00000498540 CXCL9Q07325 125 aa19.39■□□□□ 0.69
TRAF4-212ENST00000498540 SLC10A5Q5PT55 438 aa19.39■□□□□ 0.69
TRAF4-212ENST00000498540 GPR101Q96P66 508 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-212ENST00000498540 UTP14AQ9BVJ6 771 aaKnown RBP19.39■□□□□ 0.69
TRAF4-212ENST00000498540 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
TRAF4-212ENST00000498540 MAPK8IP3Q9UPT6 1336 aa19.39■□□□□ 0.69
TRAF4-212ENST00000498540 TAF1P21675 1872 aa19.39■□□□□ 0.69
TRAF4-212ENST00000498540 EIF2S2P20042 333 aaKnown RBP19.38■□□□□ 0.69
TRAF4-212ENST00000498540 RTFDC1Q9BY42 306 aaPredicted RBP19.38■□□□□ 0.69
TRAF4-212ENST00000498540 VPS33BQ9H267 617 aa19.38■□□□□ 0.69
TRAF4-212ENST00000498540 ZNRF3Q9ULT6 936 aa19.38■□□□□ 0.69
TRAF4-212ENST00000498540 AOC2O75106 756 aa19.37■□□□□ 0.69
TRAF4-212ENST00000498540 GMPSP49915 693 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-212ENST00000498540 TMX4Q9H1E5 349 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-212ENST00000498540 TSKSQ9UJT2 592 aa19.37■□□□□ 0.69
TRAF4-212ENST00000498540 DUOX1Q9NRD9 1551 aa19.36■□□□□ 0.69
TRAF4-212ENST00000498540 SUPT20HQ8NEM7 779 aa19.36■□□□□ 0.69
TRAF4-212ENST00000498540 BEGAINQ9BUH8 593 aa19.36■□□□□ 0.69
TRAF4-212ENST00000498540 LRRC37AA6NMS7 1700 aa19.35■□□□□ 0.69
TRAF4-212ENST00000498540 CELF2O95319 508 aaKnown RBP19.35■□□□□ 0.69
TRAF4-212ENST00000498540 HCLS1P14317 486 aaPredicted RBP19.35■□□□□ 0.69
TRAF4-212ENST00000498540 FAM161AQ3B820 660 aa19.35■□□□□ 0.69
TRAF4-212ENST00000498540 DPP8Q6V1X1 898 aaPredicted RBP19.35■□□□□ 0.69
TRAF4-212ENST00000498540 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
TRAF4-212ENST00000498540 GLIS2Q9BZE0 524 aaPredicted RBP19.35■□□□□ 0.69
TRAF4-212ENST00000498540 KIAA2012Q0VF49 1180 aa19.34■□□□□ 0.69
TRAF4-212ENST00000498540 CIAPIN1Q6FI81 312 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms