RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 OLFM4Q6UX06 510 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 CRAMP1Q96RY5 1269 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 ARFGEF2Q9Y6D5 1785 aa18.03■□□□□ 0.48
SHANK2-217ENST00000498519 SCN4AP35499 1836 aa18.02■□□□□ 0.48
SHANK2-217ENST00000498519 RASSF10A6NK89 507 aa18.02■□□□□ 0.48
SHANK2-217ENST00000498519 FOXN1O15353 648 aa18.02■□□□□ 0.48
SHANK2-217ENST00000498519 MAP2K1Q02750 393 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-217ENST00000498519 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
SHANK2-217ENST00000498519 PARP10Q53GL7 1025 aa18.02■□□□□ 0.48
SHANK2-217ENST00000498519 LARGE2Q8N3Y3 721 aa18.02■□□□□ 0.48
SHANK2-217ENST00000498519 CCDC88AQ3V6T2 1871 aa18.01■□□□□ 0.47
SHANK2-217ENST00000498519 MYL6BP14649 208 aa18.01■□□□□ 0.47
SHANK2-217ENST00000498519 MAP1SQ66K74 1059 aaPredicted RBP18.01■□□□□ 0.47
SHANK2-217ENST00000498519 NLRP3Q96P20 1036 aa18.01■□□□□ 0.47
SHANK2-217ENST00000498519 WBP1LQ9NX94 342 aa18.01■□□□□ 0.47
SHANK2-217ENST00000498519 ABT1Q9ULW3 272 aaKnown RBP18.01■□□□□ 0.47
SHANK2-217ENST00000498519 GJA3Q9Y6H8 435 aa18.01■□□□□ 0.47
SHANK2-217ENST00000498519 PPEF1O14829 653 aaPredicted RBP18■□□□□ 0.47
SHANK2-217ENST00000498519 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
SHANK2-217ENST00000498519 USP50Q70EL3 339 aaPredicted RBP18■□□□□ 0.47
SHANK2-217ENST00000498519 ZNF34Q8IZ26 560 aa18■□□□□ 0.47
SHANK2-217ENST00000498519 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
SHANK2-217ENST00000498519 ABCC12Q96J65 1359 aa18■□□□□ 0.47
SHANK2-217ENST00000498519 GPTP24298 496 aa17.99■□□□□ 0.47
SHANK2-217ENST00000498519 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
SHANK2-217ENST00000498519 TTLL7Q6ZT98 887 aa17.99■□□□□ 0.47
SHANK2-217ENST00000498519 NIM1KQ8IY84 436 aa17.99■□□□□ 0.47
SHANK2-217ENST00000498519 SUPT20HQ8NEM7 779 aa17.99■□□□□ 0.47
SHANK2-217ENST00000498519 DDX21Q9NR30 783 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHANK2-217ENST00000498519 ECE1P42892 770 aa17.98■□□□□ 0.47
SHANK2-217ENST00000498519 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
SHANK2-217ENST00000498519 BEGAINQ9BUH8 593 aa17.98■□□□□ 0.47
SHANK2-217ENST00000498519 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
SHANK2-217ENST00000498519 SNED1Q8TER0 1413 aa17.98■□□□□ 0.47
SHANK2-217ENST00000498519 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
SHANK2-217ENST00000498519 NTSR2O95665 410 aa17.97■□□□□ 0.47
SHANK2-217ENST00000498519 HSP90AB3PQ58FF7 597 aa17.97■□□□□ 0.47
SHANK2-217ENST00000498519 UTP14AQ9BVJ6 771 aaKnown RBP17.97■□□□□ 0.47
SHANK2-217ENST00000498519 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
SHANK2-217ENST00000498519 UBN2Q6ZU65 1347 aa17.97■□□□□ 0.47
SHANK2-217ENST00000498519 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
SHANK2-217ENST00000498519 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
SHANK2-217ENST00000498519 ATP6V0A2Q9Y487 856 aa17.96■□□□□ 0.47
SHANK2-217ENST00000498519 BBOX1O75936 387 aa17.95■□□□□ 0.46
SHANK2-217ENST00000498519 SCNN1DP51172 638 aa17.95■□□□□ 0.46
SHANK2-217ENST00000498519 SLC10A5Q5PT55 438 aa17.95■□□□□ 0.46
SHANK2-217ENST00000498519 EPS15P42566 896 aa17.94■□□□□ 0.46
SHANK2-217ENST00000498519 LBX1P52954 281 aa17.94■□□□□ 0.46
SHANK2-217ENST00000498519 ADARB2Q9NS39 739 aaKnown RBP17.94■□□□□ 0.46
SHANK2-217ENST00000498519 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
SHANK2-217ENST00000498519 PAXIP1Q6ZW49 1069 aaPredicted RBP17.93■□□□□ 0.46
SHANK2-217ENST00000498519 THUMPD2Q9BTF0 503 aaKnown RBP17.93■□□□□ 0.46
SHANK2-217ENST00000498519 ZNRF3Q9ULT6 936 aa17.93■□□□□ 0.46
SHANK2-217ENST00000498519 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
SHANK2-217ENST00000498519 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
SHANK2-217ENST00000498519 DPP8Q6V1X1 898 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-217ENST00000498519 TMC4Q7Z404 712 aa17.92■□□□□ 0.46
SHANK2-217ENST00000498519 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-217ENST00000498519 LAMB4A4D0S4 1761 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 ADAMTSL1Q8N6G6 1762 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 RIPK4P57078 832 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 TNIP1Q15025 636 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 AOC3Q16853 763 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 DDX46Q7L014 1031 aaKnown RBP17.91■□□□□ 0.46
SHANK2-217ENST00000498519 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 CAPNS2Q96L46 248 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 GPRC5DQ9NZD1 345 aa17.91■□□□□ 0.46
SHANK2-217ENST00000498519 HSPA8P11142 646 aaKnown RBP17.9■□□□□ 0.46
SHANK2-217ENST00000498519 MAP2K2P36507 400 aa17.9■□□□□ 0.46
SHANK2-217ENST00000498519 MPNDQ8N594 471 aa17.9■□□□□ 0.46
SHANK2-217ENST00000498519 ZC3H15Q8WU90 426 aaKnown RBP17.9■□□□□ 0.46
SHANK2-217ENST00000498519 GPR101Q96P66 508 aaPredicted RBP17.9■□□□□ 0.46
SHANK2-217ENST00000498519 TLL2Q9Y6L7 1015 aa17.9■□□□□ 0.46
SHANK2-217ENST00000498519 CACNA1SQ13698 1873 aa17.9■□□□□ 0.46
SHANK2-217ENST00000498519 CA12O43570 354 aa17.89■□□□□ 0.45
SHANK2-217ENST00000498519 PDIA6Q15084 440 aa17.89■□□□□ 0.45
SHANK2-217ENST00000498519 ABCC4O15439 1325 aa17.89■□□□□ 0.45
SHANK2-217ENST00000498519 CXCL9Q07325 125 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 RALBP1Q15311 655 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 CIAPIN1Q6FI81 312 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 C3orf67Q6ZVT6 689 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 HHIPL1Q96JK4 782 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 BCL2L13Q9BXK5 485 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 TRMT112Q9UI30 125 aaKnown RBP17.88■□□□□ 0.45
SHANK2-217ENST00000498519 SH3TC1Q8TE82 1336 aa17.88■□□□□ 0.45
SHANK2-217ENST00000498519 GRAPQ13588 217 aa17.87■□□□□ 0.45
SHANK2-217ENST00000498519 CST9Q5W186 159 aa17.87■□□□□ 0.45
SHANK2-217ENST00000498519 COPS6Q7L5N1 327 aa17.87■□□□□ 0.45
SHANK2-217ENST00000498519 NLRP10Q86W26 655 aa17.87■□□□□ 0.45
SHANK2-217ENST00000498519 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
SHANK2-217ENST00000498519 KDM3BQ7LBC6 1761 aa17.86■□□□□ 0.45
SHANK2-217ENST00000498519 GMPSP49915 693 aaPredicted RBP17.86■□□□□ 0.45
SHANK2-217ENST00000498519 GRM1Q13255 1194 aa17.86■□□□□ 0.45
SHANK2-217ENST00000498519 TCIRG1Q13488 830 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms