RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 CD2APQ9Y5K6 639 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 MYH3P11055 1940 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 ATP10DQ9P241 1426 aa14.48□□□□□ -0.09
CTTN-208ENST00000498223 CARMIL3Q8ND23 1372 aa14.47□□□□□ -0.09
CTTN-208ENST00000498223 RRP1P56182 461 aaKnown RBP14.47□□□□□ -0.09
CTTN-208ENST00000498223 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
CTTN-208ENST00000498223 LINS1Q8NG48 757 aa14.47□□□□□ -0.09
CTTN-208ENST00000498223 CWC25Q9NXE8 425 aaPredicted RBP14.47□□□□□ -0.09
CTTN-208ENST00000498223 GRIN3BO60391 1043 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 SERPINB2P05120 415 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 TM4SF1P30408 202 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 CCT4P50991 539 aaKnown RBP14.46□□□□□ -0.09
CTTN-208ENST00000498223 NLRP10Q86W26 655 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 CCDC191Q8NCU4 936 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 ISCA1Q9BUE6 129 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.09
CTTN-208ENST00000498223 NYXQ9GZU5 481 aa14.46□□□□□ -0.09
CTTN-208ENST00000498223 TRMT112Q9UI30 125 aaKnown RBP14.46□□□□□ -0.09
CTTN-208ENST00000498223 UBN2Q6ZU65 1347 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 PXDNLA1KZ92 1463 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 NEURL1BA8MQ27 555 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 POLRMTO00411 1230 aaKnown RBP14.45□□□□□ -0.1
CTTN-208ENST00000498223 ALDH1L1O75891 902 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 IGKV5-2P06315 115 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 RTL5Q5HYW3 569 aaPredicted RBP14.45□□□□□ -0.1
CTTN-208ENST00000498223 BEND3Q5T5X7 828 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 SUSD4Q5VX71 490 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 TPTE2Q6XPS3 522 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 ITPRIPQ8IWB1 547 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 PANK1Q8TE04 598 aa14.45□□□□□ -0.1
CTTN-208ENST00000498223 C9orf78Q9NZ63 289 aaPredicted RBP14.45□□□□□ -0.1
CTTN-208ENST00000498223 ABCC4O15439 1325 aa14.44□□□□□ -0.1
CTTN-208ENST00000498223 GOLGB1Q14789 3259 aaKnown RBP14.44□□□□□ -0.1
CTTN-208ENST00000498223 YBX3P16989 372 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTTN-208ENST00000498223 ST5P78524 1137 aa14.44□□□□□ -0.1
CTTN-208ENST00000498223 DDR1Q08345 913 aa14.44□□□□□ -0.1
CTTN-208ENST00000498223 TMEM57Q8N5G2 664 aa14.44□□□□□ -0.1
CTTN-208ENST00000498223 CNBD1Q8NA66 436 aa14.44□□□□□ -0.1
CTTN-208ENST00000498223 JARID2Q92833 1246 aaPredicted RBP14.44□□□□□ -0.1
CTTN-208ENST00000498223 LAMB2P55268 1798 aa14.43□□□□□ -0.1
CTTN-208ENST00000498223 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
CTTN-208ENST00000498223 GCKRQ14397 625 aa14.43□□□□□ -0.1
CTTN-208ENST00000498223 NUTM1Q86Y26 1132 aa14.43□□□□□ -0.1
CTTN-208ENST00000498223 CCDC24Q8N4L8 307 aa14.43□□□□□ -0.1
CTTN-208ENST00000498223 CACNA1SQ13698 1873 aa14.43□□□□□ -0.1
CTTN-208ENST00000498223 NRXN2Q9P2S2 1712 aa14.43□□□□□ -0.1
CTTN-208ENST00000498223 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
CTTN-208ENST00000498223 DDX60Q8IY21 1712 aaKnown RBP14.42□□□□□ -0.1
CTTN-208ENST00000498223 RLBP1P12271 317 aa14.42□□□□□ -0.1
CTTN-208ENST00000498223 INTS3Q68E01 1043 aaKnown RBP14.42□□□□□ -0.1
CTTN-208ENST00000498223 UBE3BQ7Z3V4 1068 aa14.42□□□□□ -0.1
CTTN-208ENST00000498223 FAM89AQ96GI7 184 aa14.42□□□□□ -0.1
CTTN-208ENST00000498223 COG6Q9Y2V7 657 aa14.42□□□□□ -0.1
CTTN-208ENST00000498223 ANKRD31Q8N7Z5 1873 aa14.42□□□□□ -0.1
CTTN-208ENST00000498223 GRM8O00222 908 aa14.41□□□□□ -0.1
CTTN-208ENST00000498223 NTSR2O95665 410 aa14.41□□□□□ -0.1
CTTN-208ENST00000498223 PCCAP05165 728 aaPredicted RBP14.41□□□□□ -0.1
CTTN-208ENST00000498223 PDE3AQ14432 1141 aa14.41□□□□□ -0.1
CTTN-208ENST00000498223 ERFEQ4G0M1 354 aa14.41□□□□□ -0.1
CTTN-208ENST00000498223 C20orf194Q5TEA3 1177 aa14.41□□□□□ -0.1
CTTN-208ENST00000498223 ZBTB38Q8NAP3 1195 aaPredicted RBP14.41□□□□□ -0.1
CTTN-208ENST00000498223 IBTKQ9P2D0 1353 aaPredicted RBP14.4□□□□□ -0.1
CTTN-208ENST00000498223 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
CTTN-208ENST00000498223 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
CTTN-208ENST00000498223 SYNE4Q8N205 404 aa14.4□□□□□ -0.1
CTTN-208ENST00000498223 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
CTTN-208ENST00000498223 CHD4Q14839 1912 aa14.39□□□□□ -0.11
CTTN-208ENST00000498223 KIF13BQ9NQT8 1826 aa14.39□□□□□ -0.11
CTTN-208ENST00000498223 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
CTTN-208ENST00000498223 UBTFL1P0CB47 393 aaPredicted RBP14.39□□□□□ -0.11
CTTN-208ENST00000498223 TAF1P21675 1872 aa14.39□□□□□ -0.11
CTTN-208ENST00000498223 H7C1W4 665 aa14.38□□□□□ -0.11
CTTN-208ENST00000498223 GNAI3P08754 354 aa14.38□□□□□ -0.11
CTTN-208ENST00000498223 HCLS1P14317 486 aaPredicted RBP14.38□□□□□ -0.11
CTTN-208ENST00000498223 IRX6P78412 446 aaPredicted RBP14.38□□□□□ -0.11
CTTN-208ENST00000498223 MVPQ14764 893 aaKnown RBP14.38□□□□□ -0.11
CTTN-208ENST00000498223 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
CTTN-208ENST00000498223 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
CTTN-208ENST00000498223 HDAC5Q9UQL6 1122 aa14.38□□□□□ -0.11
CTTN-208ENST00000498223 SPEF2Q9C093 1822 aa14.38□□□□□ -0.11
CTTN-208ENST00000498223 TNRC6CQ9HCJ0 1690 aaKnown RBP14.37□□□□□ -0.11
CTTN-208ENST00000498223 NBPF7P0C2Y1 421 aaPredicted RBP14.37□□□□□ -0.11
CTTN-208ENST00000498223 PDE6BP35913 854 aa14.37□□□□□ -0.11
CTTN-208ENST00000498223 NLRP3Q96P20 1036 aa14.37□□□□□ -0.11
CTTN-208ENST00000498223 MEIS3Q99687 375 aa14.37□□□□□ -0.11
CTTN-208ENST00000498223 USP44Q9H0E7 712 aa14.37□□□□□ -0.11
CTTN-208ENST00000498223 ABCC12Q96J65 1359 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 PDE8AO60658 829 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 NEFLP07196 543 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 CRBNQ96SW2 442 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 CHMP3Q9Y3E7 222 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
CTTN-208ENST00000498223 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
CTTN-208ENST00000498223 RPGRQ92834 1020 aaKnown RBP14.35□□□□□ -0.11
CTTN-208ENST00000498223 SUCLG2Q96I99 432 aa14.35□□□□□ -0.11
CTTN-208ENST00000498223 H0YIN7 160 aa14.34□□□□□ -0.11
CTTN-208ENST00000498223 GNAI2P04899 355 aa14.34□□□□□ -0.11
CTTN-208ENST00000498223 TGFB2P61812 414 aa14.34□□□□□ -0.11
CTTN-208ENST00000498223 SLC10A5Q5PT55 438 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms