RNA–Protein interactions for RNA: ENST00000498044.6

CBWD1-218, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-218ENST00000498044 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
CBWD1-218ENST00000498044 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
CBWD1-218ENST00000498044 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
CBWD1-218ENST00000498044 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
CBWD1-218ENST00000498044 FNDC3AQ9Y2H6 1198 aaKnown RBP8.62□□□□□ -1.03
CBWD1-218ENST00000498044 RTCBQ9Y3I0 505 aaKnown RBP8.62□□□□□ -1.03
CBWD1-218ENST00000498044 KHNYNO15037 678 aaKnown RBP8.61□□□□□ -1.03
CBWD1-218ENST00000498044 LAMC2Q13753 1193 aa8.61□□□□□ -1.03
CBWD1-218ENST00000498044 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
CBWD1-218ENST00000498044 GTPBP3Q969Y2 492 aaKnown RBP8.61□□□□□ -1.03
CBWD1-218ENST00000498044 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
CBWD1-218ENST00000498044 ASB16Q96NS5 453 aa8.61□□□□□ -1.03
CBWD1-218ENST00000498044 PHF24Q9UPV7 400 aa8.61□□□□□ -1.03
CBWD1-218ENST00000498044 CDC14CA4D256 554 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 KCNQ4P56696 695 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 TNP2Q05952 138 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 EHHADHQ08426 723 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
CBWD1-218ENST00000498044 ZNF787Q6DD87 383 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-218ENST00000498044 SV2AQ7L0J3 742 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 CMTR1Q8N1G2 835 aaKnown RBP8.6□□□□□ -1.03
CBWD1-218ENST00000498044 NANOS1Q8WY41 292 aaKnown RBP8.6□□□□□ -1.03
CBWD1-218ENST00000498044 TRERF1Q96PN7 1200 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
CBWD1-218ENST00000498044 KCNH4Q9UQ05 1017 aa8.6□□□□□ -1.03
CBWD1-218ENST00000498044 DCDC2BA2VCK2 349 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 EFSO43281 561 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 BNIP3LO60238 219 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 MAPTP10636 758 aaKnown RBP8.59□□□□□ -1.03
CBWD1-218ENST00000498044 NPAS3Q8IXF0 933 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 GJD3Q8N144 294 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 VWA5B2Q8N398 1253 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 RGS22Q8NE09 1264 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 DMRTB1Q96MA1 342 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 CFHR5Q9BXR6 569 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
CBWD1-218ENST00000498044 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-218ENST00000498044 ANKRD33BA6NCL7 494 aa8.58□□□□□ -1.04
CBWD1-218ENST00000498044 C8orf34Q49A92 452 aa8.58□□□□□ -1.04
CBWD1-218ENST00000498044 TMC7Q7Z402 723 aa8.58□□□□□ -1.04
CBWD1-218ENST00000498044 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
CBWD1-218ENST00000498044 UBAP1LF5GYI3 381 aa8.57□□□□□ -1.04
CBWD1-218ENST00000498044 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
CBWD1-218ENST00000498044 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
CBWD1-218ENST00000498044 FAM129BQ96TA1 746 aa8.57□□□□□ -1.04
CBWD1-218ENST00000498044 MARK1Q9P0L2 795 aa8.57□□□□□ -1.04
CBWD1-218ENST00000498044 XYLBO75191 536 aa8.56□□□□□ -1.04
CBWD1-218ENST00000498044 EGFRP00533 1210 aa8.56□□□□□ -1.04
CBWD1-218ENST00000498044 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
CBWD1-218ENST00000498044 KCNMB2Q9Y691 235 aa8.56□□□□□ -1.04
CBWD1-218ENST00000498044 NEFLP07196 543 aa8.55□□□□□ -1.04
CBWD1-218ENST00000498044 GRNP28799 593 aaKnown RBP8.55□□□□□ -1.04
CBWD1-218ENST00000498044 PLCB3Q01970 1234 aa8.55□□□□□ -1.04
CBWD1-218ENST00000498044 COL19A1Q14993 1142 aa8.55□□□□□ -1.04
CBWD1-218ENST00000498044 PDE12Q6L8Q7 609 aaKnown RBP8.55□□□□□ -1.04
CBWD1-218ENST00000498044 XKR5Q6UX68 686 aa8.55□□□□□ -1.04
CBWD1-218ENST00000498044 H3BM21 787 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 TREHO43280 583 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 FGFR3P22607 806 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 CCINQ13939 588 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 TRIP4Q15650 581 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-218ENST00000498044 FAM182BQ5T319 152 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 EFCC1Q9HA90 598 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
CBWD1-218ENST00000498044 GPR25O00155 361 aa8.53□□□□□ -1.04
CBWD1-218ENST00000498044 ZNF438Q7Z4V0 828 aa8.53□□□□□ -1.04
CBWD1-218ENST00000498044 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
CBWD1-218ENST00000498044 ALKBH8Q96BT7 664 aaKnown RBP8.53□□□□□ -1.04
CBWD1-218ENST00000498044 GSX2Q9BZM3 304 aa8.53□□□□□ -1.04
CBWD1-218ENST00000498044 AMOTL2Q9Y2J4 779 aa8.53□□□□□ -1.04
CBWD1-218ENST00000498044 GPR182O15218 404 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 IGHA2P01877 340 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 CD33P20138 364 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 VEGFBP49765 207 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 SPEM2Q0P670 501 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 DSC3Q14574 896 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 NLRP13Q86W25 1043 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 PNMA5Q96PV4 448 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 NIF3L1Q9GZT8 377 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
CBWD1-218ENST00000498044 A6NHS1 94 aa8.51□□□□□ -1.05
CBWD1-218ENST00000498044 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
CBWD1-218ENST00000498044 SASH3O75995 380 aa8.51□□□□□ -1.05
CBWD1-218ENST00000498044 CTBSQ01459 385 aa8.5□□□□□ -1.05
CBWD1-218ENST00000498044 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.05
CBWD1-218ENST00000498044 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
CBWD1-218ENST00000498044 TTC39BQ5VTQ0 682 aaPredicted RBP8.5□□□□□ -1.05
CBWD1-218ENST00000498044 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
CBWD1-218ENST00000498044 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
CBWD1-218ENST00000498044 PRR12Q9ULL5 1215 aa8.5□□□□□ -1.05
CBWD1-218ENST00000498044 TNFRSF21O75509 655 aa8.49□□□□□ -1.05
CBWD1-218ENST00000498044 BMP4P12644 408 aa8.49□□□□□ -1.05
CBWD1-218ENST00000498044 MX2P20592 715 aa8.49□□□□□ -1.05
CBWD1-218ENST00000498044 FGD1P98174 961 aa8.49□□□□□ -1.05
CBWD1-218ENST00000498044 SNX29Q8TEQ0 813 aa8.49□□□□□ -1.05
CBWD1-218ENST00000498044 SLC30A3Q99726 388 aa8.49□□□□□ -1.05
CBWD1-218ENST00000498044 BCL2L13Q9BXK5 485 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms