RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ATXN7L1Q9ULK2 861 aaPredicted RBP5.49□□□□□ -1.53
RIF1-212ENST00000498041 FAM157BP0CG42 384 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 DGKZQ13574 1117 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 C11orf91Q3C1V1 193 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 C16orf46Q6P387 395 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 CAPN12Q6ZSI9 719 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 ZNF280CQ8ND82 737 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 HSH2DQ96JZ2 352 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 GGA1Q9UJY5 639 aa5.48□□□□□ -1.53
RIF1-212ENST00000498041 DCDC2BA2VCK2 349 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 C1QTNF9BB2RNN3 333 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 TGFBR3LH3BV60 316 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 KHNYNO15037 678 aaKnown RBP5.47□□□□□ -1.53
RIF1-212ENST00000498041 MAPTP10636 758 aaKnown RBP5.47□□□□□ -1.53
RIF1-212ENST00000498041 FGFR3P22607 806 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 TNP2Q05952 138 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 LAMC2Q13753 1193 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 NAA30Q147X3 362 aaPredicted RBP5.47□□□□□ -1.53
RIF1-212ENST00000498041 COX20Q5RI15 118 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 IER5Q5VY09 327 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 PHLDB3Q6NSJ2 640 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 KLK14Q9P0G3 267 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 GDF2Q9UK05 429 aaPredicted RBP5.47□□□□□ -1.53
RIF1-212ENST00000498041 LRFN2Q9ULH4 789 aa5.47□□□□□ -1.53
RIF1-212ENST00000498041 NEURL1BA8MQ27 555 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 EFSO43281 561 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 CTBSQ01459 385 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 DOC2BQ14184 412 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 BTLAQ7Z6A9 289 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 GOLGA6L1Q8N7Z2 621 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 CEP63Q96MT8 703 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 SAP130Q9H0E3 1048 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 LRRC4BQ9NT99 713 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 SEPT3Q9UH03 358 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 MTMR7Q9Y216 660 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 BCS1LQ9Y276 419 aa5.46□□□□□ -1.54
RIF1-212ENST00000498041 C2CD2LO14523 706 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 BRD2P25440 801 aaKnown RBP5.45□□□□□ -1.54
RIF1-212ENST00000498041 TYRO3Q06418 890 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 FAM182BQ5T319 152 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 IFT43Q96FT9 208 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 SEMA6BQ9H3T3 888 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 BRD7Q9NPI1 651 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 MARK1Q9P0L2 795 aa5.45□□□□□ -1.54
RIF1-212ENST00000498041 DMGDHQ9UI17 866 aaKnown RBP5.45□□□□□ -1.54
RIF1-212ENST00000498041 MICAL2O94851 1124 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 CD33P20138 364 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 ARID4AP29374 1257 aaPredicted RBP5.44□□□□□ -1.54
RIF1-212ENST00000498041 SCNN1AP37088 669 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 CHRNA4P43681 627 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 KCNQ4P56696 695 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 CD163Q86VB7 1156 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 BTBD6Q96KE9 485 aa5.44□□□□□ -1.54
RIF1-212ENST00000498041 TNFRSF10BO14763 440 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 GNB5O14775 395 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 IDH3AP50213 366 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 SFSWAPQ12872 951 aaKnown RBP5.43□□□□□ -1.54
RIF1-212ENST00000498041 LINC00114Q6XXX2 140 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 TREML1Q86YW5 311 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 HELQQ8TDG4 1101 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 GTF3C2Q8WUA4 911 aaPredicted RBP5.43□□□□□ -1.54
RIF1-212ENST00000498041 PSMG3-AS1Q96PY0 264 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 STRN4Q9NRL3 753 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 STIM2Q9P246 746 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 HCN2Q9UL51 889 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 KCNH4Q9UQ05 1017 aa5.43□□□□□ -1.54
RIF1-212ENST00000498041 SCO2A0A1W2PP80 73 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 BRD1O95696 1058 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 EPB42P16452 691 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 INPP5BP32019 993 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 ARSDP51689 593 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 ETFBKMTQ8IXQ9 262 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 ABTB2Q8N961 1025 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 TRAIPQ9BWF2 469 aa5.42□□□□□ -1.54
RIF1-212ENST00000498041 PIK3R2O00459 728 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 OPLAHO14841 1288 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 EPXP11678 715 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 ZMYM1Q5SVZ6 1142 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 SLCO4C1Q6ZQN7 724 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 ALYREFQ86V81 257 aaKnown RBP5.41□□□□□ -1.54
RIF1-212ENST00000498041 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 AVENQ9NQS1 362 aaPredicted RBP5.41□□□□□ -1.54
RIF1-212ENST00000498041 FAM13BQ9NYF5 915 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 PRR12Q9ULL5 1215 aa5.41□□□□□ -1.54
RIF1-212ENST00000498041 ABL1P00519 1130 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 ARAFP10398 606 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 FKBP4Q02790 459 aaKnown RBP eCLIP5.4□□□□□ -1.54
RIF1-212ENST00000498041 SPEM2Q0P670 501 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 SF3B2Q13435 895 aaKnown RBP5.4□□□□□ -1.54
RIF1-212ENST00000498041 NEUROD1Q13562 356 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 FAM26DQ5JW98 314 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 CHSY3Q70JA7 882 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 TXNDC2Q86VQ3 553 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 CCER1Q8TC90 406 aaPredicted RBP5.4□□□□□ -1.54
RIF1-212ENST00000498041 SLC30A3Q99726 388 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 C11orf16Q9NQ32 467 aa5.4□□□□□ -1.54
RIF1-212ENST00000498041 NOP53Q9NZM5 478 aaKnown RBP5.4□□□□□ -1.54
RIF1-212ENST00000498041 ZBTB39O15060 712 aa5.39□□□□□ -1.55
RIF1-212ENST00000498041 HOXB4P17483 251 aaPredicted RBP5.39□□□□□ -1.55
RIF1-212ENST00000498041 ZAP70P43403 619 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms