RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 ZNF219Q9P2Y4 722 aaPredicted RBP31.48■■■□□ 2.63
STX1A-214ENST00000497980 GOLGA2Q08379 1002 aa31.47■■■□□ 2.63
STX1A-214ENST00000497980 NLRP10Q86W26 655 aa31.47■■■□□ 2.63
STX1A-214ENST00000497980 ANKRD36CQ5JPF3 1778 aa31.47■■■□□ 2.63
STX1A-214ENST00000497980 TNRC6CQ9HCJ0 1690 aaKnown RBP31.47■■■□□ 2.63
STX1A-214ENST00000497980 ELL2O00472 640 aaPredicted RBP31.46■■■□□ 2.63
STX1A-214ENST00000497980 WDR63Q8IWG1 891 aa31.46■■■□□ 2.63
STX1A-214ENST00000497980 C8orf58Q8NAV2 365 aa31.46■■■□□ 2.63
STX1A-214ENST00000497980 NLRP3Q96P20 1036 aa31.46■■■□□ 2.63
STX1A-214ENST00000497980 SLX4Q8IY92 1834 aa31.46■■■□□ 2.63
STX1A-214ENST00000497980 SBF1O95248 1867 aa31.45■■■□□ 2.63
STX1A-214ENST00000497980 HOXA10P31260 410 aaPredicted RBP31.45■■■□□ 2.63
STX1A-214ENST00000497980 C7orf43Q8WVR3 580 aa31.45■■■□□ 2.63
STX1A-214ENST00000497980 SLC10A5Q5PT55 438 aa31.44■■■□□ 2.62
STX1A-214ENST00000497980 RTKN2Q8IZC4 609 aa31.44■■■□□ 2.62
STX1A-214ENST00000497980 FAM9BQ8IZU0 186 aa31.44■■■□□ 2.62
STX1A-214ENST00000497980 RBM17Q96I25 401 aaKnown RBP31.44■■■□□ 2.62
STX1A-214ENST00000497980 SH3TC1Q8TE82 1336 aa31.44■■■□□ 2.62
STX1A-214ENST00000497980 CC2D2BQ6DHV5 1058 aa31.43■■■□□ 2.62
STX1A-214ENST00000497980 TSR2Q969E8 191 aaKnown RBP31.43■■■□□ 2.62
STX1A-214ENST00000497980 FER1L6Q2WGJ9 1857 aa31.42■■■□□ 2.62
STX1A-214ENST00000497980 KIF3CO14782 793 aa31.42■■■□□ 2.62
STX1A-214ENST00000497980 DDX58O95786 925 aaKnown RBP31.42■■■□□ 2.62
STX1A-214ENST00000497980 GRIPAP1Q4V328 841 aa31.42■■■□□ 2.62
STX1A-214ENST00000497980 TRMT112Q9UI30 125 aaKnown RBP31.42■■■□□ 2.62
STX1A-214ENST00000497980 CRAMP1Q96RY5 1269 aa31.41■■■□□ 2.62
STX1A-214ENST00000497980 STK31Q9BXU1 1019 aa31.41■■■□□ 2.62
STX1A-214ENST00000497980 RIC3Q7Z5B4 369 aa31.4■■■□□ 2.62
STX1A-214ENST00000497980 PRELPP51888 382 aa31.39■■■□□ 2.62
STX1A-214ENST00000497980 TRIM28Q13263 835 aaKnown RBP31.39■■■□□ 2.62
STX1A-214ENST00000497980 TWISTNBQ3B726 338 aaPredicted RBP31.39■■■□□ 2.62
STX1A-214ENST00000497980 ISCA1Q9BUE6 129 aa31.39■■■□□ 2.62
STX1A-214ENST00000497980 CACNA1SQ13698 1873 aa31.39■■■□□ 2.62
STX1A-214ENST00000497980 FKBP4Q02790 459 aaKnown RBP eCLIP31.38■■■□□ 2.61
STX1A-214ENST00000497980 TSPYL6Q8N831 410 aa31.38■■■□□ 2.61
STX1A-214ENST00000497980 FANCIQ9NVI1 1328 aa31.38■■■□□ 2.61
STX1A-214ENST00000497980 SENP3-EIF4A1A0A087X0R7 540 aa31.37■■■□□ 2.61
STX1A-214ENST00000497980 TIAM2Q8IVF5 1701 aa31.37■■■□□ 2.61
STX1A-214ENST00000497980 GLTPD2A6NH11 291 aa31.36■■■□□ 2.61
STX1A-214ENST00000497980 DPY19L2Q6NUT2 758 aa31.36■■■□□ 2.61
STX1A-214ENST00000497980 TMX4Q9H1E5 349 aaPredicted RBP31.36■■■□□ 2.61
STX1A-214ENST00000497980 NMRK2Q9NPI5 230 aa31.36■■■□□ 2.61
STX1A-214ENST00000497980 HSP90B1P14625 803 aaKnown RBP31.35■■■□□ 2.61
STX1A-214ENST00000497980 PHAXQ9H814 394 aaKnown RBP31.35■■■□□ 2.61
STX1A-214ENST00000497980 SALL2Q9Y467 1007 aaPredicted RBP31.35■■■□□ 2.61
STX1A-214ENST00000497980 PPEF1O14829 653 aaPredicted RBP31.34■■■□□ 2.61
STX1A-214ENST00000497980 TOMM70O94826 608 aa31.34■■■□□ 2.61
STX1A-214ENST00000497980 C16orf71Q8IYS4 520 aaPredicted RBP31.34■■■□□ 2.61
STX1A-214ENST00000497980 PSMD1Q99460 953 aa31.34■■■□□ 2.61
STX1A-214ENST00000497980 MYH16Q9H6N6 1097 aa31.34■■■□□ 2.61
STX1A-214ENST00000497980 ATP5J2-PTCD1G3V325 749 aa31.32■■■□□ 2.6
STX1A-214ENST00000497980 C3orf67Q6ZVT6 689 aa31.32■■■□□ 2.6
STX1A-214ENST00000497980 HCLS1P14317 486 aaPredicted RBP31.31■■■□□ 2.6
STX1A-214ENST00000497980 DDX46Q7L014 1031 aaKnown RBP31.3■■■□□ 2.6
STX1A-214ENST00000497980 CCDC191Q8NCU4 936 aa31.3■■■□□ 2.6
STX1A-214ENST00000497980 SNED1Q8TER0 1413 aa31.3■■■□□ 2.6
STX1A-214ENST00000497980 ABCC4O15439 1325 aa31.29■■■□□ 2.6
STX1A-214ENST00000497980 METTL22Q9BUU2 404 aaPredicted RBP31.29■■■□□ 2.6
STX1A-214ENST00000497980 DICER1Q9UPY3 1922 aaKnown RBP31.29■■■□□ 2.6
STX1A-214ENST00000497980 BBOX1O75936 387 aa31.28■■■□□ 2.6
STX1A-214ENST00000497980 TMC4Q7Z404 712 aa31.28■■■□□ 2.6
STX1A-214ENST00000497980 ZBTB38Q8NAP3 1195 aaPredicted RBP31.28■■■□□ 2.6
STX1A-214ENST00000497980 RBM46Q8TBY0 533 aaKnown RBP31.28■■■□□ 2.6
STX1A-214ENST00000497980 MYD88Q99836 296 aa31.28■■■□□ 2.6
STX1A-214ENST00000497980 IARSP41252 1262 aaKnown RBP31.27■■■□□ 2.6
STX1A-214ENST00000497980 OLFM4Q6UX06 510 aa31.27■■■□□ 2.6
STX1A-214ENST00000497980 KSR2Q6VAB6 950 aa31.27■■■□□ 2.6
STX1A-214ENST00000497980 FAM89AQ96GI7 184 aa31.27■■■□□ 2.6
STX1A-214ENST00000497980 ZNF277Q9NRM2 450 aaPredicted RBP31.27■■■□□ 2.6
STX1A-214ENST00000497980 VEGFAP15692 232 aaPredicted RBP31.26■■■□□ 2.59
STX1A-214ENST00000497980 NEXNQ0ZGT2 675 aa31.26■■■□□ 2.59
STX1A-214ENST00000497980 RRAGCQ9HB90 399 aa31.26■■■□□ 2.59
STX1A-214ENST00000497980 CWC25Q9NXE8 425 aaPredicted RBP31.26■■■□□ 2.59
STX1A-214ENST00000497980 ATP6V0A2Q9Y487 856 aa31.26■■■□□ 2.59
STX1A-214ENST00000497980 CCDC88AQ3V6T2 1871 aa31.26■■■□□ 2.59
STX1A-214ENST00000497980 CCER2I3L3R5 266 aa31.25■■■□□ 2.59
STX1A-214ENST00000497980 GRAPQ13588 217 aa31.25■■■□□ 2.59
STX1A-214ENST00000497980 SYNE4Q8N205 404 aa31.25■■■□□ 2.59
STX1A-214ENST00000497980 GRAPLQ8TC17 118 aaPredicted RBP31.25■■■□□ 2.59
STX1A-214ENST00000497980 MAP3K2Q9Y2U5 619 aa31.25■■■□□ 2.59
STX1A-214ENST00000497980 SLC4A2P04920 1241 aa31.24■■■□□ 2.59
STX1A-214ENST00000497980 SF3B3Q15393 1217 aaKnown RBP31.24■■■□□ 2.59
STX1A-214ENST00000497980 IRS4O14654 1257 aaPredicted RBP31.23■■■□□ 2.59
STX1A-214ENST00000497980 PI4KAP2A4QPH2 592 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 VAMP4O75379 141 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 PCCAP05165 728 aaPredicted RBP31.22■■■□□ 2.59
STX1A-214ENST00000497980 HSPA6P17066 643 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 EXOSC9Q06265 439 aaKnown RBP31.22■■■□□ 2.59
STX1A-214ENST00000497980 PI4KAP1Q8N8J0 262 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 JDP2Q8WYK2 163 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 VPS33BQ9H267 617 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 ZNF521Q96K83 1311 aa31.22■■■□□ 2.59
STX1A-214ENST00000497980 WDR90Q96KV7 1748 aa31.21■■■□□ 2.59
STX1A-214ENST00000497980 FSTL1Q12841 308 aa31.21■■■□□ 2.59
STX1A-214ENST00000497980 FLIIQ13045 1269 aa31.21■■■□□ 2.59
STX1A-214ENST00000497980 SUPT20HQ8NEM7 779 aa31.21■■■□□ 2.59
STX1A-214ENST00000497980 LAMB2P55268 1798 aa31.2■■■□□ 2.59
STX1A-214ENST00000497980 SP8Q8IXZ3 490 aa31.2■■■□□ 2.59
STX1A-214ENST00000497980 DDX60Q8IY21 1712 aaKnown RBP31.19■■■□□ 2.58
STX1A-214ENST00000497980 TCERG1O14776 1098 aaKnown RBP31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms