RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 YEATS4O95619 227 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
LRRC55-201ENST00000497933 CCDC8Q9H0W5 538 aaPredicted RBP13.01□□□□□ -0.33
LRRC55-201ENST00000497933 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
LRRC55-201ENST00000497933 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
LRRC55-201ENST00000497933 IFFO1Q0D2I5 559 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 STX1AQ16623 288 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 PAF1Q8N7H5 531 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 MBIPQ9NS73 344 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 MSH6P52701 1360 aa13.01□□□□□ -0.33
LRRC55-201ENST00000497933 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 LDHCP07864 332 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
LRRC55-201ENST00000497933 MAP3K2Q9Y2U5 619 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 ZNF518AQ6AHZ1 1483 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 ZNF444Q8N0Y2 327 aaPredicted RBP13□□□□□ -0.33
LRRC55-201ENST00000497933 MNAT1P51948 309 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 TERF1P54274 439 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 CCDC150Q8NCX0 1101 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 ASXL2Q76L83 1435 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
LRRC55-201ENST00000497933 TNIP1Q15025 636 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 RNF187Q5TA31 235 aaPredicted RBP13□□□□□ -0.33
LRRC55-201ENST00000497933 TSG101Q99816 390 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
LRRC55-201ENST00000497933 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 CCDC175P0C221 793 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
LRRC55-201ENST00000497933 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 RAB34Q9BZG1 259 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 STX6O43752 255 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 TMC6Q7Z403 805 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 TICAM2Q86XR7 235 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 CACNA2D4Q7Z3S7 1137 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
LRRC55-201ENST00000497933 ZNF165P49910 485 aa12.98□□□□□ -0.33
LRRC55-201ENST00000497933 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
LRRC55-201ENST00000497933 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
LRRC55-201ENST00000497933 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
LRRC55-201ENST00000497933 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
LRRC55-201ENST00000497933 CCDC113Q9H0I3 377 aa12.98□□□□□ -0.33
LRRC55-201ENST00000497933 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
LRRC55-201ENST00000497933 ALS2CR12Q96Q35 445 aa12.98□□□□□ -0.33
LRRC55-201ENST00000497933 IGSF3O75054 1194 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 TUBB4AP04350 444 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
LRRC55-201ENST00000497933 SPECC1LQ69YQ0 1117 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 NUP88Q99567 741 aaPredicted RBP12.97□□□□□ -0.33
LRRC55-201ENST00000497933 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
LRRC55-201ENST00000497933 UQCRFS1P1P0C7P4 283 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 GPTP24298 496 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 SPTY2D1Q68D10 685 aaPredicted RBP12.97□□□□□ -0.33
LRRC55-201ENST00000497933 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
LRRC55-201ENST00000497933 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 HMG20BQ9P0W2 317 aa12.97□□□□□ -0.33
LRRC55-201ENST00000497933 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
LRRC55-201ENST00000497933 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
LRRC55-201ENST00000497933 CCDC186Q7Z3E2 898 aa12.96□□□□□ -0.33
LRRC55-201ENST00000497933 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
LRRC55-201ENST00000497933 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.33
LRRC55-201ENST00000497933 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
LRRC55-201ENST00000497933 KLHL10Q6JEL2 608 aa12.96□□□□□ -0.33
LRRC55-201ENST00000497933 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
LRRC55-201ENST00000497933 BAG3O95817 575 aa12.96□□□□□ -0.34
LRRC55-201ENST00000497933 GJB2P29033 226 aa12.96□□□□□ -0.34
LRRC55-201ENST00000497933 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.34
LRRC55-201ENST00000497933 CCDC178Q5BJE1 867 aa12.96□□□□□ -0.34
LRRC55-201ENST00000497933 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.34
LRRC55-201ENST00000497933 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.34
LRRC55-201ENST00000497933 STAMBPO95630 424 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 ITSN2Q9NZM3 1697 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 RIMS2Q9UQ26 1411 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 ALDH1L1O75891 902 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
LRRC55-201ENST00000497933 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
LRRC55-201ENST00000497933 ARFGAP3Q9NP61 516 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 ASXL1Q8IXJ9 1541 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 TTC31Q49AM3 519 aaPredicted RBP12.95□□□□□ -0.34
LRRC55-201ENST00000497933 RSPH14Q9UHP6 348 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 SKILP12757 684 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 NF2P35240 595 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 NUCB1Q02818 461 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 FAM200AQ8TCP9 573 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 CCDC12Q8WUD4 166 aaPredicted RBP12.95□□□□□ -0.34
LRRC55-201ENST00000497933 NUP153P49790 1475 aaKnown RBP12.95□□□□□ -0.34
LRRC55-201ENST00000497933 FAM83GA6ND36 823 aa12.95□□□□□ -0.34
LRRC55-201ENST00000497933 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms